RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 C2orf91Q6ZV80 131 aa12.5□□□□□ -0.41
NLE1-202ENST00000442241 NDFIP1Q9BT67 221 aa12.5□□□□□ -0.41
NLE1-202ENST00000442241 MAP1LC3CQ9BXW4 147 aa12.5□□□□□ -0.41
NLE1-202ENST00000442241 FAM106CPP0CH98 169 aa12.49□□□□□ -0.41
NLE1-202ENST00000442241 LMO4P61968 165 aa12.49□□□□□ -0.41
NLE1-202ENST00000442241 LINC01545Q5VT33 79 aa12.49□□□□□ -0.41
NLE1-202ENST00000442241 CLEC19AQ6UXS0 136 aa12.49□□□□□ -0.41
NLE1-202ENST00000442241 ZNF80P51504 273 aaPredicted RBP12.49□□□□□ -0.41
NLE1-202ENST00000442241 LOC389332A0A1B0GUA5 103 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 A0A1B0GUT8 65 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 COX8AP10176 69 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 EFNA4P52798 201 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 FAM106AQ4KMX7 169 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 GFRA4Q9GZZ7 299 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.48□□□□□ -0.41
NLE1-202ENST00000442241 C7orf71A4D174 169 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 PRAC2D3DTV9 90 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 SH2D1AO60880 128 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 LYZL1Q6UWQ5 148 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 THYN1Q9P016 225 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 RABAC1Q9UI14 185 aa12.48□□□□□ -0.41
NLE1-202ENST00000442241 TMEM238C9JI98 176 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 FOXE3Q13461 319 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 MINOS1Q5TGZ0 78 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 MEGF9Q9H1U4 602 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 MINOS1-NBL1R4GNA1 71 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 HAX1O00165 279 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 IGHG4P01861 327 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 CT45A10P0DMU9 189 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 CSN1S1P47710 185 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 SEC11AP67812 179 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 HSPB8Q9UJY1 196 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 PIEZO1Q92508 2521 aa12.47□□□□□ -0.41
NLE1-202ENST00000442241 PPIFP30405 207 aaKnown RBP12.46□□□□□ -0.41
NLE1-202ENST00000442241 S100A7P31151 101 aa12.46□□□□□ -0.41
NLE1-202ENST00000442241 EBI3Q14213 229 aa12.46□□□□□ -0.41
NLE1-202ENST00000442241 C16orf54Q6UWD8 224 aa12.46□□□□□ -0.41
NLE1-202ENST00000442241 C1orf122Q6ZSJ8 110 aa12.46□□□□□ -0.41
NLE1-202ENST00000442241 CENPEQ02224 2701 aa12.46□□□□□ -0.41
NLE1-202ENST00000442241 SAP30O75446 220 aa12.46□□□□□ -0.42
NLE1-202ENST00000442241 UBE2E1P51965 193 aa12.46□□□□□ -0.42
NLE1-202ENST00000442241 FAM231BA6NCW3 169 aa12.45□□□□□ -0.42
NLE1-202ENST00000442241 SMKR1H3BMG3 65 aa12.45□□□□□ -0.42
NLE1-202ENST00000442241 IGHV4-39P01824 125 aa12.45□□□□□ -0.42
NLE1-202ENST00000442241 CENPVL3A0A0U1RRI6 287 aa12.45□□□□□ -0.42
NLE1-202ENST00000442241 TMEM189A5PLL7 270 aa12.45□□□□□ -0.42
NLE1-202ENST00000442241 LOXL1Q08397 574 aaPredicted RBP12.45□□□□□ -0.42
NLE1-202ENST00000442241 AMN1Q8IY45 258 aa12.45□□□□□ -0.42
NLE1-202ENST00000442241 LYPD1Q8N2G4 141 aa12.45□□□□□ -0.42
NLE1-202ENST00000442241 NPFFO15130 113 aa12.44□□□□□ -0.42
NLE1-202ENST00000442241 RPL7P18124 248 aaKnown RBP12.44□□□□□ -0.42
NLE1-202ENST00000442241 TCTAP57738 103 aa12.44□□□□□ -0.42
NLE1-202ENST00000442241 FER1L6-AS1Q8NA97 138 aa12.44□□□□□ -0.42
NLE1-202ENST00000442241 CCDC140Q96MF4 163 aa12.44□□□□□ -0.42
NLE1-202ENST00000442241 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.44□□□□□ -0.422e-7■■■■■ 34
NLE1-202ENST00000442241 GAGE10A6NGK3 116 aa12.44□□□□□ -0.42
NLE1-202ENST00000442241 LY6EQ16553 131 aa12.44□□□□□ -0.42
NLE1-202ENST00000442241 TMEM97Q5BJF2 176 aa12.44□□□□□ -0.42
NLE1-202ENST00000442241 ZNF502Q8TBZ5 544 aa12.44□□□□□ -0.42
NLE1-202ENST00000442241 PRR25Q96S07 402 aa12.44□□□□□ -0.42
NLE1-202ENST00000442241 IGSF10Q6WRI0 2623 aa12.43□□□□□ -0.42
NLE1-202ENST00000442241 FGF6P10767 208 aa12.43□□□□□ -0.42
NLE1-202ENST00000442241 RIGQ13278 110 aa12.43□□□□□ -0.42
NLE1-202ENST00000442241 Q6ZQT7 251 aa12.43□□□□□ -0.42
NLE1-202ENST00000442241 MSRB1Q9NZV6 116 aa12.43□□□□□ -0.42
NLE1-202ENST00000442241 USP9XQ93008 2570 aaPredicted RBP12.43□□□□□ -0.42
NLE1-202ENST00000442241 D6R8Y8 96 aa12.43□□□□□ -0.42
NLE1-202ENST00000442241 ZNF747Q9BV97 191 aa12.43□□□□□ -0.42
NLE1-202ENST00000442241 OOSP1A8MZH6 123 aa12.42□□□□□ -0.42
NLE1-202ENST00000442241 NCR2O95944 276 aa12.42□□□□□ -0.42
NLE1-202ENST00000442241 IFI27P40305 119 aaPredicted RBP12.42□□□□□ -0.42
NLE1-202ENST00000442241 FAM110DQ8TAY7 271 aaPredicted RBP12.42□□□□□ -0.42
NLE1-202ENST00000442241 TRAV40A0A0B4J280 105 aa12.42□□□□□ -0.42
NLE1-202ENST00000442241 G3V4G9 280 aa12.42□□□□□ -0.42
NLE1-202ENST00000442241 ORM1P02763 201 aa12.42□□□□□ -0.42
NLE1-202ENST00000442241 RIPPLY3P57055 190 aa12.42□□□□□ -0.42
NLE1-202ENST00000442241 DPF1Q92782 380 aa12.42□□□□□ -0.42
NLE1-202ENST00000442241 JMJD8Q96S16 334 aa12.42□□□□□ -0.42
NLE1-202ENST00000442241 TRBV6-1A0A0K0K1D8 114 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 C9orf118A6NHY6 69 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 PDE6HQ13956 83 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 LCNL1Q6ZST4 164 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 GTF2H5Q6ZYL4 71 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 ZNF48Q96MX3 618 aaPredicted RBP12.41□□□□□ -0.42
NLE1-202ENST00000442241 PRORYQ9H606 182 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 ZFAND3Q9H8U3 227 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 IGHV4-61A0A0C4DH41 118 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 CLPSL1A2RUU4 121 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 GAS8-AS1O95177 125 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 PRSS3P2Q8NHM4 247 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 NRGNQ92686 78 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 CHTOPQ9Y3Y2 248 aaKnown RBP12.41□□□□□ -0.42
NLE1-202ENST00000442241 POLQO75417 2590 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 ZANQ9Y493 2812 aa12.41□□□□□ -0.42
NLE1-202ENST00000442241 CSPG4Q6UVK1 2322 aa12.4□□□□□ -0.42
NLE1-202ENST00000442241 H3BRM9 83 aa12.4□□□□□ -0.42
NLE1-202ENST00000442241 J3KRW8 73 aa12.4□□□□□ -0.42
NLE1-202ENST00000442241 TWIST1Q15672 202 aa12.4□□□□□ -0.42
NLE1-202ENST00000442241 IL17RELQ6ZVW7 336 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms