RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 FAM122CQ6P4D5 195 aa14.02□□□□□ -0.17
SHROOM1-204ENST00000440118 SMIM3Q9BZL3 60 aa14.02□□□□□ -0.17
SHROOM1-204ENST00000440118 OR51M1Q9H341 326 aa14.02□□□□□ -0.17
SHROOM1-204ENST00000440118 HSPB11Q9Y547 144 aa14.02□□□□□ -0.17
SHROOM1-204ENST00000440118 CBY3A6NI87 242 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 NDUFB4O95168 129 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 OR10J4P0C629 311 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 ERCC8Q13216 396 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 RNF212Q495C1 297 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 LINC00336Q6ZUF6 198 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 PAXXQ9BUH6 204 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 MBD2Q9UBB5 411 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 FUT9Q9Y231 359 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 NACAE9PAV3 2078 aa14.01□□□□□ -0.17
SHROOM1-204ENST00000440118 C7orf71A4D174 169 aa14□□□□□ -0.17
SHROOM1-204ENST00000440118 SLC25A5P05141 298 aaKnown RBP14□□□□□ -0.17
SHROOM1-204ENST00000440118 RPL12P30050 165 aaKnown RBP14□□□□□ -0.17
SHROOM1-204ENST00000440118 FFAR4Q5NUL3 377 aa14□□□□□ -0.17
SHROOM1-204ENST00000440118 TMEM78Q5T7P6 136 aa14□□□□□ -0.17
SHROOM1-204ENST00000440118 PYGO2Q9BRQ0 406 aa14□□□□□ -0.17
SHROOM1-204ENST00000440118 NBEAP1P0C6P0 100 aa13.99□□□□□ -0.17
SHROOM1-204ENST00000440118 UBE2L3P68036 154 aaKnown RBP13.99□□□□□ -0.17
SHROOM1-204ENST00000440118 NDUFA5Q16718 116 aa13.99□□□□□ -0.17
SHROOM1-204ENST00000440118 FAM167A-AS1Q96KT0 104 aa13.99□□□□□ -0.17
SHROOM1-204ENST00000440118 LINC00477Q96M19 166 aa13.99□□□□□ -0.17
SHROOM1-204ENST00000440118 IGKV2-40A0A087WW87 121 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-204ENST00000440118 IGKV2D-40P01614 121 aaPredicted RBP13.98□□□□□ -0.17
SHROOM1-204ENST00000440118 GPX1P07203 203 aa13.98□□□□□ -0.17
SHROOM1-204ENST00000440118 CSN1S1P47710 185 aa13.98□□□□□ -0.17
SHROOM1-204ENST00000440118 OR5I1Q13606 314 aa13.98□□□□□ -0.17
SHROOM1-204ENST00000440118 KHDC3LQ587J8 217 aa13.98□□□□□ -0.17
SHROOM1-204ENST00000440118 RNF141Q8WVD5 230 aa13.98□□□□□ -0.17
SHROOM1-204ENST00000440118 GAGE12BA1L429 117 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 GAGE7O76087 117 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 GAGE12FP0CL80 117 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 GAGE12GP0CL81 117 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 GAGE12IP0CL82 117 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 TAS2R45P59539 299 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 CD300CQ08708 224 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 BTN1A1Q13410 526 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 LGALS9BQ3B8N2 356 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 ZNF680Q8NEM1 530 aa13.97□□□□□ -0.17
SHROOM1-204ENST00000440118 SOHLH1Q5JUK2 328 aa13.96□□□□□ -0.17
SHROOM1-204ENST00000440118 OR2T35Q8NGX2 323 aa13.96□□□□□ -0.17
SHROOM1-204ENST00000440118 FXYD5Q96DB9 178 aa13.96□□□□□ -0.17
SHROOM1-204ENST00000440118 PHYHIPLQ96FC7 376 aa13.96□□□□□ -0.17
SHROOM1-204ENST00000440118 AGPAT4-IT1Q9H0P7 198 aa13.96□□□□□ -0.17
SHROOM1-204ENST00000440118 HECTD4Q9Y4D8 3996 aa13.95□□□□□ -0.18
SHROOM1-204ENST00000440118 RGS13O14921 159 aa13.95□□□□□ -0.18
SHROOM1-204ENST00000440118 CCL18P55774 89 aa13.95□□□□□ -0.18
SHROOM1-204ENST00000440118 FAM3BP58499 235 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-204ENST00000440118 C9orf47Q6ZRZ4 202 aa13.95□□□□□ -0.18
SHROOM1-204ENST00000440118 PRSS29PA6NIE9 313 aa13.94□□□□□ -0.18
SHROOM1-204ENST00000440118 KLLNB2CW77 178 aa13.94□□□□□ -0.18
SHROOM1-204ENST00000440118 RANP62826 216 aaKnown RBP13.94□□□□□ -0.18
SHROOM1-204ENST00000440118 VGLL1Q99990 258 aa13.94□□□□□ -0.18
SHROOM1-204ENST00000440118 TRGV2A0A075B6R0 118 aa13.93□□□□□ -0.18
SHROOM1-204ENST00000440118 HMSDA8MTL9 139 aa13.93□□□□□ -0.18
SHROOM1-204ENST00000440118 EIF4E3Q8N5X7 224 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-204ENST00000440118 Q8TAT8 98 aa13.93□□□□□ -0.18
SHROOM1-204ENST00000440118 GNPNAT1Q96EK6 184 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-204ENST00000440118 ARPC5LQ9BPX5 153 aa13.93□□□□□ -0.18
SHROOM1-204ENST00000440118 Q9H3A6 140 aa13.93□□□□□ -0.18
SHROOM1-204ENST00000440118 TRAV26-1A0A087WT03 109 aa13.92□□□□□ -0.18
SHROOM1-204ENST00000440118 A0A1W2PPV4 95 aa13.92□□□□□ -0.18
SHROOM1-204ENST00000440118 CRISP2P16562 243 aa13.92□□□□□ -0.18
SHROOM1-204ENST00000440118 M6PRP20645 277 aa13.92□□□□□ -0.18
SHROOM1-204ENST00000440118 ZNF138P52744 262 aa13.92□□□□□ -0.18
SHROOM1-204ENST00000440118 ACOT6Q3I5F7 207 aaPredicted RBP13.92□□□□□ -0.18
SHROOM1-204ENST00000440118 GSN-AS1Q9NRJ2 163 aa13.92□□□□□ -0.18
SHROOM1-204ENST00000440118 TRGV1A0A0A0MS02 117 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 A0A0J9YY99 117 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 NMBP08949 121 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 DAZ2Q13117 558 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 Q6ZTI0 123 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 LYPD1Q8N2G4 141 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 LINC00612Q8N6U2 182 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 CMTM2Q8TAZ6 248 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 FAM19A4Q96LR4 140 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 TMPRSS5Q9H3S3 457 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 ZNF492Q9P255 531 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 RPH3ALQ9UNE2 315 aa13.91□□□□□ -0.18
SHROOM1-204ENST00000440118 FAM74A1Q5RGS3 127 aa13.9□□□□□ -0.18
SHROOM1-204ENST00000440118 RTL8CO15255 209 aa13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 ZNF324O75467 553 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 EIF3GO75821 320 aaKnown RBP eCLIP13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 ZNF266Q14584 549 aa13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 ANXA2RQ3ZCQ2 193 aa13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 C1orf134Q5TEV5 83 aa13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 Q6ZR54 194 aa13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 ZFAND2AQ8N6M9 145 aa13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 RXFP4Q8TDU9 374 aa13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 ZNF503Q96F45 646 aa13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 WFDC1Q9HC57 220 aa13.89□□□□□ -0.19
SHROOM1-204ENST00000440118 IGHV1OR15-1A0A075B7D0 117 aa13.88□□□□□ -0.19
SHROOM1-204ENST00000440118 A0A0D9SG52 128 aa13.88□□□□□ -0.19
SHROOM1-204ENST00000440118 RBAKDNA6NC62 111 aa13.88□□□□□ -0.19
SHROOM1-204ENST00000440118 NKX2-5P52952 324 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-204ENST00000440118 PRR9Q5T870 116 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms