RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PVRIGQ6DKI7 326 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 GFRALQ6UXV0 394 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 MRPL16Q9NX20 251 aaKnown RBP7.13□□□□□ -1.27
COPB1-202ENST00000439561 PTPRBP23467 1997 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 TRBV25-1A0A075B6N4 114 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 ARHGAP32A7KAX9 2087 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 OR11H12B2RN74 326 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 APOMO95445 188 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 CLEC3BP05452 202 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 CRYGCP07315 174 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 SCGB1C2P0DMR2 95 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 FGF6P10767 208 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 TMEM155Q4W5P6 130 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 RNF182Q8N6D2 247 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 OR11H1Q8NG94 326 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 OR11H2Q8NH07 326 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 RNASE6Q93091 150 aaKnown RBP7.13□□□□□ -1.27
COPB1-202ENST00000439561 MRPL35Q9NZE8 188 aaKnown RBP7.13□□□□□ -1.27
COPB1-202ENST00000439561 TMEM14CQ9P0S9 112 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 GAGE12HA6NDE8 117 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 FABP5P3A8MUU1 101 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 H3BRN7 92 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 BUB1B-PAK6H3BSN5 160 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 SPRY2O43597 315 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 GAS8-AS1O95177 125 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 SMIM17P0DL12 118 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 EFNA4P52798 201 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 KLRD1Q13241 179 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 GAGE13Q4V321 117 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 UFSP1Q6NVU6 142 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 PRR25Q96S07 402 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 A0A096LNJ9 63 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 M0R381 172 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 VKORC1Q9BQB6 163 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 NXT2Q9NPJ8 142 aaKnown RBP7.12□□□□□ -1.27
COPB1-202ENST00000439561 COLQQ9Y215 455 aaPredicted RBP7.12□□□□□ -1.27
COPB1-202ENST00000439561 ZFHX2Q9C0A1 2572 aaPredicted RBP7.12□□□□□ -1.27
COPB1-202ENST00000439561 ZFHX4Q86UP3 3567 aa7.12□□□□□ -1.27
COPB1-202ENST00000439561 TEX22C9J3V5 150 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 INS-IGF2F8WCM5 200 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 I3L2K1 104 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 NBR2O15453 112 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 PSMB2P49721 201 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 RAB1BQ9H0U4 201 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 H7C2G1 150 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 K7EIM0 57 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 ATP5LO75964 103 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 FAM90A27PA6NNH2 459 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 ZNF80P51504 273 aaPredicted RBP7.11□□□□□ -1.27
COPB1-202ENST00000439561 TMEM78Q5T7P6 136 aa7.11□□□□□ -1.27
COPB1-202ENST00000439561 SIVA1O15304 175 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 EMP1P54849 157 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 CKS1BP61024 79 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 ATP5G2Q06055 141 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 CEND1Q8N111 149 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 LYPD1Q8N2G4 141 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 LINC00574Q9H8X3 128 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 ANKHD1Q8IWZ3 2542 aaKnown RBP7.1□□□□□ -1.27
COPB1-202ENST00000439561 MGAQ8IWI9 3026 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.1□□□□□ -1.27
COPB1-202ENST00000439561 CEACAM3P40198 252 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 CD300EQ496F6 205 aaPredicted RBP7.1□□□□□ -1.27
COPB1-202ENST00000439561 IL17RELQ6ZVW7 336 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 LINC00311Q8N616 119 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 ABHD17AQ96GS6 310 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 SCGB3A1Q96QR1 104 aa7.1□□□□□ -1.27
COPB1-202ENST00000439561 K7EM74 188 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 CD3EP07766 207 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 ODF1Q14990 250 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 DPM3Q9P2X0 92 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 RAXQ9Y2V3 346 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 NEGR1Q7Z3B1 354 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 DTX2Q86UW9 622 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 LINC01560Q8TB33 94 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 PGPEP1Q9NXJ5 209 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 A0A0G2JNJ9 132 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 IGLL5B9A064 214 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 NDUFS8O00217 210 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 C12orf74Q32Q52 190 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 DPF1Q92782 380 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 Q9UFV3 132 aa7.09□□□□□ -1.27
COPB1-202ENST00000439561 RAI1Q7Z5J4 1906 aaPredicted RBP7.08□□□□□ -1.28
COPB1-202ENST00000439561 FCN3O75636 299 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 RAB9AP51151 201 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 LAGE3Q14657 143 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 ZNF562Q6V9R5 426 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 PIP4P2Q8N4L2 257 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 AGRNO00468 2067 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 F5H697 171 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 TRGV3P03979 118 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 DYNAPQ8N1N2 210 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 NUP37Q8NFH4 326 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 ZNF815PA8K554 130 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 HOXA3O43365 443 aaPredicted RBP7.08□□□□□ -1.28
COPB1-202ENST00000439561 Q1RN00 199 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 ZNF493Q6ZR52 646 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 FAM57AQ8TBR7 257 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 TIMD4Q96H15 378 aa7.08□□□□□ -1.28
COPB1-202ENST00000439561 PRAC2D3DTV9 90 aa7.07□□□□□ -1.28
COPB1-202ENST00000439561 E7EQL1 145 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms