RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 A0A1B0GWB2 263 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 PPBPP02775 128 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 TMPRSS3P57727 454 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 CACNG8Q8WXS5 425 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 SIGLEC9Q9Y336 463 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 C9orf118A6NHY6 69 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 B9A039 149 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 CEACAM3P40198 252 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 TMEM155Q4W5P6 130 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 Q86TA4 180 aa7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 MRPL32Q9BYC8 188 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-202ENST00000439374 APOMO95445 188 aa7.85□□□□□ -1.15
CDC42SE1-202ENST00000439374 LGALS7P47929 136 aa7.85□□□□□ -1.15
CDC42SE1-202ENST00000439374 ZC2HC1BQ5TFG8 222 aa7.85□□□□□ -1.15
CDC42SE1-202ENST00000439374 PSG8Q9UQ74 426 aa7.85□□□□□ -1.15
CDC42SE1-202ENST00000439374 ABCA12Q86UK0 2595 aa7.85□□□□□ -1.15
CDC42SE1-202ENST00000439374 CR1LQ2VPA4 569 aa7.85□□□□□ -1.15
CDC42SE1-202ENST00000439374 C1orf122Q6ZSJ8 110 aa7.85□□□□□ -1.15
CDC42SE1-202ENST00000439374 DCHS2Q6V1P9 2916 aa7.85□□□□□ -1.15
CDC42SE1-202ENST00000439374 IGKV1D-37A0A075B6S9 117 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 SMAD7O15105 426 aaKnown RBP7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 RAB1BQ9H0U4 201 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 CYSLTR1Q9Y271 337 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 TRAV40A0A0B4J280 105 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 BUB1B-PAK6H3BSN5 160 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 K7EP34 96 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 EFNA4P52798 201 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 ZNF502Q8TBZ5 544 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 PTH2Q96A98 100 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 SLC25A39Q9BZJ4 359 aaPredicted RBP7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 A0A1W2PPM0 123 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 K7EQM0 130 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 RPL11P62913 178 aaKnown RBP7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 ERCC8Q13216 396 aa7.84□□□□□ -1.15
CDC42SE1-202ENST00000439374 RAI1Q7Z5J4 1906 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 FAM162BQ5T6X4 162 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 NPFFR1Q9GZQ6 430 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 CELSR1Q9NYQ6 3014 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 A0A1B0GXF2 115 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 KLF5Q13887 457 aaPredicted RBP7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 TMEM249Q2WGJ8 235 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 PRSS47A8MTI9 375 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 IGLV2-23P01705 113 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 POU2AF1Q16633 256 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 SCGB1D4Q6XE38 83 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 ORMDL3Q8N138 153 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 RNF182Q8N6D2 247 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 SIGMAR1Q99720 223 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 PKD1L2Q7Z442 2459 aa7.83□□□□□ -1.16
CDC42SE1-202ENST00000439374 RAB9AP51151 201 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 HSD52Q0P140 79 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 C8orf46Q8TAG6 207 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 COL25A1Q9BXS0 654 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 AAMDCQ9H7C9 122 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 DPM3Q9P2X0 92 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 ZNF785A8K8V0 405 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 HBDP02042 147 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 SEC11AP67812 179 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 MRPL51Q4U2R6 128 aaKnown RBP7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 NEGR1Q7Z3B1 354 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 STXBP6Q8NFX7 210 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 FMC1Q96HJ9 113 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 ZNF479Q96JC4 524 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 CHAC1Q9BUX1 264 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 G3V4G9 280 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 DEFB1P60022 68 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 GLMPQ8WWB7 406 aa7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 BEX4Q9NWD9 120 aaPredicted RBP7.82□□□□□ -1.16
CDC42SE1-202ENST00000439374 LINC01545Q5VT33 79 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 TMEM158Q8WZ71 300 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 VKORC1Q9BQB6 163 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 CHODLQ9H9P2 273 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 IGHV3-64A0A075B6Q5 118 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 SH2D1AO60880 128 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 PSMB2P49721 201 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 CKS1BP61024 79 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 SRSF9Q13242 221 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 Q6ZQT7 251 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 ATP5L2Q7Z4Y8 100 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 TMEM219Q86XT9 240 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 C20orf78Q9BR46 151 aa7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 COL27A1Q8IZC6 1860 aaPredicted RBP7.81□□□□□ -1.16
CDC42SE1-202ENST00000439374 TMEM8BA6NDV4 472 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 NPIPB6E9PJ23 425 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 FAM231DQ6ZW35 169 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 NAV2Q8IVL1 2488 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 TRAV26-1A0A087WT03 109 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 GAGE12HA6NDE8 117 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 K7ENP7 123 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 CIDEAO60543 219 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 WIPF2Q8TF74 440 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 VGLL1Q99990 258 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 MS4A6AQ9H2W1 248 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 H3BRM9 83 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 M0R381 172 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 MGPP08493 103 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 SCGB1C2P0DMR2 95 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 CRIP1P50238 77 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms