RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 E7EUB6 86 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 EVI2AP22794 236 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 DEFB113Q30KQ7 82 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 STPG4Q8N801 248 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 NHP2Q9NX24 153 aaKnown RBP9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 FABP5P3A8MUU1 101 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 GGTLC3B5MD39 225 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 LINC00614P0C842 121 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 SMAGPQ0VAQ4 97 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 MTURNQ8N3F0 131 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 PSMB11A5LHX3 300 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 NPIPB5A8MRT5 1133 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 ZC2HC1AQ96GY0 325 aa9.17□□□□□ -0.94
TRAPPC9-202ENST00000438773 TSPOP30536 169 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 YPEL3P61236 119 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 LCNL1Q6ZST4 164 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 POLQO75417 2590 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 SIGLEC15Q6ZMC9 328 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 FOXC2Q99958 501 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 BOD1L1Q8NFC6 3051 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 M0R381 172 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 APOMO95445 188 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 USMG5Q96IX5 58 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 RCHY1Q96PM5 261 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 LY96Q9Y6Y9 160 aa9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 SMG1Q96Q15 3661 aaKnown RBP9.16□□□□□ -0.94
TRAPPC9-202ENST00000438773 K7EN84 100 aa9.15□□□□□ -0.94
TRAPPC9-202ENST00000438773 THAP8Q8NA92 274 aa9.15□□□□□ -0.94
TRAPPC9-202ENST00000438773 C10orf105Q8TEF2 133 aa9.15□□□□□ -0.94
TRAPPC9-202ENST00000438773 TSKUQ8WUA8 353 aa9.15□□□□□ -0.94
TRAPPC9-202ENST00000438773 SLC25A2Q9BXI2 301 aa9.15□□□□□ -0.94
TRAPPC9-202ENST00000438773 GNB1LQ9BYB4 327 aa9.15□□□□□ -0.94
TRAPPC9-202ENST00000438773 FER1L6-AS1Q8NA97 138 aa9.15□□□□□ -0.94
TRAPPC9-202ENST00000438773 NUP35Q8NFH5 326 aa9.15□□□□□ -0.94
TRAPPC9-202ENST00000438773 IGHV3OR16-12A0A075B7B8 117 aa9.15□□□□□ -0.95
TRAPPC9-202ENST00000438773 Q8TAT8 98 aa9.15□□□□□ -0.95
TRAPPC9-202ENST00000438773 FAM181BA6NEQ2 426 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 PLA2G2AP14555 144 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 EIF4EBP1Q13541 118 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 FAM74A4Q5TZK3 123 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 CENPVL3A0A0U1RRI6 287 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 FAM223BA6NKX1 122 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 SMKR1H3BMG3 65 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 NDUFA3O95167 84 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 IGLV2-23P01705 113 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 Q6AWC8 147 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 FAM223AQ8IWN6 122 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 SOX21Q9Y651 276 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 KMT2EQ8IZD2 1858 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 A0A1B0GWB2 263 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 LYPD1Q8N2G4 141 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
TRAPPC9-202ENST00000438773 IGKV1OR2-108A0A075B7D4 117 aa9.13□□□□□ -0.95
TRAPPC9-202ENST00000438773 OVOL3O00110 214 aa9.13□□□□□ -0.95
TRAPPC9-202ENST00000438773 WFDC12Q8WWY7 111 aa9.13□□□□□ -0.95
TRAPPC9-202ENST00000438773 ABCA12Q86UK0 2595 aa9.13□□□□□ -0.95
TRAPPC9-202ENST00000438773 IGHV4-38-2P0DP08 117 aa9.13□□□□□ -0.95
TRAPPC9-202ENST00000438773 SLAQ13239 276 aa9.13□□□□□ -0.95
TRAPPC9-202ENST00000438773 PCSK5Q92824 1860 aa9.13□□□□□ -0.95
TRAPPC9-202ENST00000438773 PIP4P2Q8N4L2 257 aa9.13□□□□□ -0.95
TRAPPC9-202ENST00000438773 IGHV7-81A0A0B4J1V7 117 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 SMIM13P0DJ93 91 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 LMO4P61968 165 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 UBE2V1Q13404 147 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 ZNF491Q8N8L2 437 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 OR2K2Q8NGT1 345 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 GTSF1LQ9H1H1 148 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 TNRC18O15417 2968 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 TRBV19A0A075B6N1 114 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 RNASE4P34096 147 aaKnown RBP9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 PRSS57Q6UWY2 283 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 TEX43Q6ZNM6 134 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 RAX2Q96IS3 184 aa9.12□□□□□ -0.95
TRAPPC9-202ENST00000438773 PDE6HQ13956 83 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 PSG3Q16557 428 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 TMEM249Q2WGJ8 235 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 TTC9CQ8N5M4 171 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 NPBQ8NG41 125 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 RHPN1-AS1Q9BWJ2 59 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 K7EIM0 57 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 IGKV1-17P01599 117 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 LY6G5BQ8NDX9 201 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 FXYD5Q96DB9 178 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 MRPL36Q9P0J6 103 aaKnown RBP9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 IGLC2P0DOY2 106 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 IGLC3P0DOY3 106 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 IGLL1P15814 213 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 ASIPP42127 132 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 Q8N9W7 124 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 SMIM12Q96EX1 92 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 PEMTQ9UBM1 199 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 SAMD13Q5VXD3 122 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 MORN5Q5VZ52 161 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 SIRPDQ9H106 197 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 ZNF292O60281 2723 aa9.11□□□□□ -0.95
TRAPPC9-202ENST00000438773 J3QLI3 93 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 DEFB112Q30KQ8 113 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms