RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 DEFB121Q5J5C9 76 aa13.54□□□□□ -0.24
HDAC6-208ENST00000438518 TMEM75Q8N9X5 138 aa13.54□□□□□ -0.24
HDAC6-208ENST00000438518 FAM210AQ96ND0 272 aa13.54□□□□□ -0.24
HDAC6-208ENST00000438518 CSTL1Q9H114 145 aa13.54□□□□□ -0.24
HDAC6-208ENST00000438518 RPH3ALQ9UNE2 315 aa13.54□□□□□ -0.24
HDAC6-208ENST00000438518 IGKV2-40A0A087WW87 121 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-208ENST00000438518 RBFOX3A6NFN3 312 aa13.53□□□□□ -0.24
HDAC6-208ENST00000438518 IGKV2D-40P01614 121 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-208ENST00000438518 S100A9P06702 114 aaKnown RBP13.53□□□□□ -0.24
HDAC6-208ENST00000438518 TSPOP30536 169 aa13.53□□□□□ -0.24
HDAC6-208ENST00000438518 GNG5P63218 68 aa13.53□□□□□ -0.24
HDAC6-208ENST00000438518 HAGHQ16775 308 aa13.53□□□□□ -0.24
HDAC6-208ENST00000438518 GOLT1AQ6ZVE7 132 aa13.53□□□□□ -0.24
HDAC6-208ENST00000438518 ZNF492Q9P255 531 aa13.53□□□□□ -0.24
HDAC6-208ENST00000438518 ZNF705DP0CH99 300 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-208ENST00000438518 ZNF705BP0CI00 300 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-208ENST00000438518 RPL35AP18077 110 aaKnown RBP13.52□□□□□ -0.25
HDAC6-208ENST00000438518 ZNF138P52744 262 aa13.52□□□□□ -0.25
HDAC6-208ENST00000438518 ZNF506Q5JVG8 444 aa13.52□□□□□ -0.25
HDAC6-208ENST00000438518 AMTNQ6UX39 209 aa13.52□□□□□ -0.25
HDAC6-208ENST00000438518 C11orf52Q96A22 123 aa13.52□□□□□ -0.25
HDAC6-208ENST00000438518 AGPAT4-IT1Q9H0P7 198 aa13.52□□□□□ -0.25
HDAC6-208ENST00000438518 SMDT1Q9H4I9 107 aa13.52□□□□□ -0.25
HDAC6-208ENST00000438518 IGKV3-20P01619 116 aa13.51□□□□□ -0.25
HDAC6-208ENST00000438518 LEPP41159 167 aa13.51□□□□□ -0.25
HDAC6-208ENST00000438518 CDKN1BP46527 198 aa13.51□□□□□ -0.25
HDAC6-208ENST00000438518 FMC1Q96HJ9 113 aa13.51□□□□□ -0.25
HDAC6-208ENST00000438518 VGLL1Q99990 258 aa13.51□□□□□ -0.25
HDAC6-208ENST00000438518 NDFIP1Q9BT67 221 aa13.51□□□□□ -0.25
HDAC6-208ENST00000438518 TRBV6-1A0A0K0K1D8 114 aa13.5□□□□□ -0.25
HDAC6-208ENST00000438518 CRISP2P16562 243 aa13.5□□□□□ -0.25
HDAC6-208ENST00000438518 AKR1C3P42330 323 aa13.5□□□□□ -0.25
HDAC6-208ENST00000438518 UBE2G1P62253 170 aa13.5□□□□□ -0.25
HDAC6-208ENST00000438518 FLI1Q01543 452 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-208ENST00000438518 Q6ZWC4 215 aa13.5□□□□□ -0.25
HDAC6-208ENST00000438518 FAM19A4Q96LR4 140 aa13.5□□□□□ -0.25
HDAC6-208ENST00000438518 EIF5A2Q9GZV4 153 aaKnown RBP13.5□□□□□ -0.25
HDAC6-208ENST00000438518 KLF12Q9Y4X4 402 aa13.5□□□□□ -0.25
HDAC6-208ENST00000438518 AGRNO00468 2067 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 TMEM250H0YL14 139 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 CA1P00915 261 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-208ENST00000438518 CT45A10P0DMU9 189 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 ERCC8Q13216 396 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 TMEM183BQ1AE95 376 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 TOR2AQ5JU69 321 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 SAPCD1Q5SSQ6 148 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 C2CD4CQ8TF44 421 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 PCNPQ8WW12 178 aaKnown RBP13.49□□□□□ -0.25
HDAC6-208ENST00000438518 B9D2Q9BPU9 175 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 C20orf144Q9BQM9 153 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 PSG8Q9UQ74 426 aa13.49□□□□□ -0.25
HDAC6-208ENST00000438518 SCO2A0A1W2PP80 73 aa13.48□□□□□ -0.25
HDAC6-208ENST00000438518 SLC35B3Q9H1N7 401 aa13.48□□□□□ -0.25
HDAC6-208ENST00000438518 TP53TG1Q9Y2A0 90 aa13.48□□□□□ -0.25
HDAC6-208ENST00000438518 IGLV2-11P01706 119 aa13.47□□□□□ -0.25
HDAC6-208ENST00000438518 TAS2R60P59551 318 aa13.47□□□□□ -0.25
HDAC6-208ENST00000438518 PEA15Q15121 130 aa13.47□□□□□ -0.25
HDAC6-208ENST00000438518 SPINK13Q1W4C9 94 aa13.47□□□□□ -0.25
HDAC6-208ENST00000438518 IGF2BP2-AS1Q96M15 143 aa13.47□□□□□ -0.25
HDAC6-208ENST00000438518 RARRES2Q99969 163 aa13.47□□□□□ -0.25
HDAC6-208ENST00000438518 MED9Q9NWA0 146 aa13.47□□□□□ -0.25
HDAC6-208ENST00000438518 ZFP30Q9Y2G7 519 aa13.47□□□□□ -0.25
HDAC6-208ENST00000438518 TRAV8-1A0A0A6YYK1 113 aa13.46□□□□□ -0.25
HDAC6-208ENST00000438518 KLLNB2CW77 178 aa13.46□□□□□ -0.25
HDAC6-208ENST00000438518 INSP01308 110 aa13.46□□□□□ -0.25
HDAC6-208ENST00000438518 Q86TA4 180 aa13.46□□□□□ -0.25
HDAC6-208ENST00000438518 Q8TAT8 98 aa13.46□□□□□ -0.25
HDAC6-208ENST00000438518 RAB19A4D1S5 217 aa13.45□□□□□ -0.26
HDAC6-208ENST00000438518 M0R2Z0 102 aa13.45□□□□□ -0.26
HDAC6-208ENST00000438518 PRB4P10163 310 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-208ENST00000438518 TMEM256Q8N2U0 113 aa13.45□□□□□ -0.26
HDAC6-208ENST00000438518 SMIM12Q96EX1 92 aa13.45□□□□□ -0.26
HDAC6-208ENST00000438518 SPATA25Q9BR10 227 aa13.45□□□□□ -0.26
HDAC6-208ENST00000438518 CRXO43186 299 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-208ENST00000438518 GPX1P07203 203 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 GIG44P09565 113 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-208ENST00000438518 COX8CQ7Z4L0 72 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 PRNTQ86SH4 94 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 SBSPONQ8IVN8 264 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 ZFAND2AQ8N6M9 145 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 CSNK1G2-AS1Q8NCQ2 148 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 LINC00479Q96M42 142 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 RCHY1Q96PM5 261 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 TM2D3Q9BRN9 247 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 TREM1Q9NP99 234 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 XCL2Q9UBD3 114 aa13.44□□□□□ -0.26
HDAC6-208ENST00000438518 MEGF8Q7Z7M0 2845 aa13.43□□□□□ -0.26
HDAC6-208ENST00000438518 TRAV34A0A0B4J273 112 aa13.43□□□□□ -0.26
HDAC6-208ENST00000438518 C7orf71A4D174 169 aa13.43□□□□□ -0.26
HDAC6-208ENST00000438518 LTAP01374 205 aa13.43□□□□□ -0.26
HDAC6-208ENST00000438518 NHLRC4P0CG21 123 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-208ENST00000438518 RPL35P42766 123 aaKnown RBP13.43□□□□□ -0.26
HDAC6-208ENST00000438518 ZMAT4Q9H898 229 aa13.43□□□□□ -0.26
HDAC6-208ENST00000438518 GOLT1BQ9Y3E0 138 aa13.43□□□□□ -0.26
HDAC6-208ENST00000438518 FXYD7P58549 80 aa13.42□□□□□ -0.26
HDAC6-208ENST00000438518 SMUG1Q53HV7 270 aa13.42□□□□□ -0.26
HDAC6-208ENST00000438518 GFI1BQ5VTD9 330 aa13.42□□□□□ -0.26
HDAC6-208ENST00000438518 RNF183Q96D59 192 aa13.42□□□□□ -0.26
HDAC6-208ENST00000438518 SGK494Q96LW2 274 aa13.42□□□□□ -0.26
HDAC6-208ENST00000438518 NIPSNAP3BQ9BS92 247 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms