RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 RPUSD4Q96CM3 377 aaKnown RBP4.7□□□□□ -1.66
SPEN-202ENST00000438066 PFDN5Q99471 154 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 TNFRSF19Q9NS68 423 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 NAT8Q9UHE5 227 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 CR1P17927 2039 aa4.7□□□□□ -1.66
SPEN-202ENST00000438066 MXRA5Q9NR99 2828 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 TRBV20OR9-2A0A075B6H5 130 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 IGLV11-55A0A075B6I3 123 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 A0A096LNT2 108 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 IGHV7-81A0A0B4J1V7 117 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 IGHV1-69DA0A0B4J2H0 117 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 NCBP2LA6PVI3 153 aaKnown RBP4.69□□□□□ -1.66
SPEN-202ENST00000438066 EPM2AB3EWF7 344 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 IGHV1-69P01742 117 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 MT-ND4LP03901 98 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 MSMBP08118 114 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 IGLC1P0CG04 106 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 C8orf88P0DMB2 117 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 BRS3P32247 399 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 TAS2R45P59539 299 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 TMEM241Q24JQ0 296 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 DUX3Q96PT4 197 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 FAM103A1Q9BTL3 118 aaKnown RBP4.69□□□□□ -1.66
SPEN-202ENST00000438066 DERL1Q9BUN8 251 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 SLC25A2Q9BXI2 301 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 TMEM167BQ9NRX6 74 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 TMEM242Q9NWH2 141 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 DOK5Q9P104 306 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 DOPEY2Q9Y3R5 2298 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 ITPR3Q14573 2671 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 IGHV3-21A0A0B4J1V1 117 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 TRAV40A0A0B4J280 105 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 GGTLC3B5MD39 225 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 COX7A2P2O60397 106 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 OR7C2O60412 319 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 ZNF253O75346 499 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 IGKV1-17P01599 117 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 SLC25A16P16260 332 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 RPL23P62829 140 aaKnown RBP4.69□□□□□ -1.66
SPEN-202ENST00000438066 KLK9Q2XQG4 91 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 C10orf113Q5VZT2 155 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 TTC9CQ8N5M4 171 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 ZNF355PQ9NSJ1 428 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 KLK9Q9UKQ9 250 aa4.69□□□□□ -1.66
SPEN-202ENST00000438066 PRRC2AP48634 2157 aaKnown RBP4.68□□□□□ -1.66
SPEN-202ENST00000438066 TRAV5A0A0B4J249 113 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 A0A1W2PRE2 83 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 B4DSR2 109 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 SIVA1O15304 175 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 CRYBA1P05813 215 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 RAB5AP20339 215 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 UBE2L3P68036 154 aaKnown RBP4.68□□□□□ -1.66
SPEN-202ENST00000438066 ELOBQ15370 118 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 ADIRFQ15847 76 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 RNF212Q495C1 297 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 LINC01551Q86U37 167 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 FAM24BQ8N5W8 94 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 PIFOQ8TCI5 191 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 Q8WTZ3 238 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 PGLYRP4Q96LB8 373 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 OPRPNQ99935 248 aaPredicted RBP4.68□□□□□ -1.66
SPEN-202ENST00000438066 HSPB9Q9BQS6 159 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 TEX15Q9BXT5 2789 aa4.68□□□□□ -1.66
SPEN-202ENST00000438066 UNC79Q9P2D8 2635 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 CLDN34H7C241 214 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 OR10J4P0C629 311 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 PYYP10082 97 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 FLI1Q01543 452 aaPredicted RBP4.67□□□□□ -1.66
SPEN-202ENST00000438066 CLEC12BQ2HXU8 276 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 KLF17Q5JT82 389 aaPredicted RBP4.67□□□□□ -1.66
SPEN-202ENST00000438066 ZNF343Q6P1L6 599 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 BRD3OSQ6XYD6 125 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 Q6ZN92 141 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 C18orf65Q6ZTR6 163 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 LINC00305Q7Z4B0 112 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 C5orf56Q8N8D9 126 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 CSNK1G2-AS1Q8NCQ2 148 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 SGMS2Q8NHU3 365 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 FXYD5Q96DB9 178 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 PRELID1Q9Y255 219 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 GCN1Q92616 2671 aaKnown RBP4.67□□□□□ -1.66
SPEN-202ENST00000438066 ITPR2Q14571 2701 aa4.67□□□□□ -1.66
SPEN-202ENST00000438066 IGHV3OR16-10A0A075B7F0 116 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 TRBV9A0A0B4J1U6 114 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 C9JCJ5 164 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 HYPMO75409 117 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 CD99P14209 185 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 ORM2P19652 201 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 MYCNOSP40205 109 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 CRIP2P52943 208 aaPredicted RBP4.66□□□□□ -1.66
SPEN-202ENST00000438066 KRTAP10-9P60411 292 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 ZNF600Q6ZNG1 722 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 RASL11BQ9BPW5 248 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 PAXXQ9BUH6 204 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 MOB4Q9Y3A3 225 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 LY96Q9Y6Y9 160 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 FLNAP21333 2647 aaKnown RBP4.66□□□□□ -1.66
SPEN-202ENST00000438066 TLN2Q9Y4G6 2542 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms