RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 ERCC8Q13216 396 aa10.21□□□□□ -0.78
HLA-DPA1-243ENST00000437811 ELOBQ15370 118 aa10.21□□□□□ -0.78
HLA-DPA1-243ENST00000437811 SAPCD1Q5SSQ6 148 aa10.21□□□□□ -0.78
HLA-DPA1-243ENST00000437811 PRR27Q6MZM9 219 aa10.21□□□□□ -0.78
HLA-DPA1-243ENST00000437811 WFDC3Q8IUB2 231 aa10.21□□□□□ -0.78
HLA-DPA1-243ENST00000437811 FAM24BQ8N5W8 94 aa10.21□□□□□ -0.78
HLA-DPA1-243ENST00000437811 DYNLRB2Q8TF09 96 aa10.21□□□□□ -0.78
HLA-DPA1-243ENST00000437811 ASCL2Q99929 193 aa10.21□□□□□ -0.78
HLA-DPA1-243ENST00000437811 URGCP-MRPS24S4R325 110 aa10.21□□□□□ -0.78
HLA-DPA1-243ENST00000437811 GATCO43716 136 aaKnown RBP10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 S100PP25815 95 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 C9orf47Q6ZRZ4 202 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 COX8CQ7Z4L0 72 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 Q8TAT8 98 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 ZC2HC1AQ96GY0 325 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 C8orf49Q96NF6 230 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 PRR25Q96S07 402 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 IMMP2LQ96T52 175 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 NDFIP1Q9BT67 221 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 AGPAT4-IT1Q9H0P7 198 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 IL36BQ9NZH7 164 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 CUBNO60494 3623 aa10.2□□□□□ -0.78
HLA-DPA1-243ENST00000437811 TRAV2A0A0B4J234 112 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 C19orf71A6NCJ1 209 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 NPIPB6E9PJ23 425 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 TFPI2P48307 235 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 ZNF138P52744 262 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 PAFAH1B2P68402 229 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 DEFB114Q30KQ6 69 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 TMEM78Q5T7P6 136 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 KCNIP4Q6PIL6 250 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 LINC00322Q6ZN03 302 aaPredicted RBP10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 NUDT10Q8NFP7 164 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 NUDT11Q96G61 164 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 GPR61Q9BZJ8 451 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 PPP1R14DQ9NXH3 145 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 SIGLEC8Q9NYZ4 499 aa10.19□□□□□ -0.78
HLA-DPA1-243ENST00000437811 TGIF2-C20orf24A0A0A6YYL0 155 aa10.18□□□□□ -0.78
HLA-DPA1-243ENST00000437811 ZNF705GA8MUZ8 300 aaPredicted RBP10.18□□□□□ -0.78
HLA-DPA1-243ENST00000437811 CXCL1P09341 107 aa10.18□□□□□ -0.78
HLA-DPA1-243ENST00000437811 TMEM61Q8N0U2 210 aa10.18□□□□□ -0.78
HLA-DPA1-243ENST00000437811 OR8A1Q8NGG7 326 aa10.18□□□□□ -0.78
HLA-DPA1-243ENST00000437811 OR10J6PQ8NGY7 276 aa10.18□□□□□ -0.78
HLA-DPA1-243ENST00000437811 PYGO2Q9BRQ0 406 aa10.18□□□□□ -0.78
HLA-DPA1-243ENST00000437811 TRBV24-1A0A075B6N3 115 aa10.17□□□□□ -0.78
HLA-DPA1-243ENST00000437811 P01737 135 aa10.17□□□□□ -0.78
HLA-DPA1-243ENST00000437811 ZNF688P0C7X2 276 aa10.17□□□□□ -0.78
HLA-DPA1-243ENST00000437811 CT45A10P0DMU9 189 aa10.17□□□□□ -0.78
HLA-DPA1-243ENST00000437811 SNRPD3P62318 126 aaKnown RBP10.17□□□□□ -0.78
HLA-DPA1-243ENST00000437811 RBPMS2Q6ZRY4 209 aaKnown RBP10.17□□□□□ -0.78
HLA-DPA1-243ENST00000437811 OR4B1Q8NGF8 309 aa10.17□□□□□ -0.78
HLA-DPA1-243ENST00000437811 DAZAP1Q96EP5 407 aaKnown RBP10.17□□□□□ -0.78
HLA-DPA1-243ENST00000437811 RPP21Q9H633 154 aaKnown RBP10.17□□□□□ -0.78
HLA-DPA1-243ENST00000437811 TRAV25A0A0B4J276 109 aa10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 A0A1W2PPQ1 181 aa10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 RAB5AP20339 215 aa10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 DEFB1P60022 68 aa10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 HIST1H1AQ02539 215 aaPredicted RBP10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 SMUG1Q53HV7 270 aa10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 CT83Q5H943 113 aa10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 PSMG4Q5JS54 123 aa10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 LINC00477Q96M19 166 aa10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 LENEPQ9Y5L5 61 aa10.16□□□□□ -0.78
HLA-DPA1-243ENST00000437811 TRAV9-1A0A075B6T8 112 aa10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 F6UB75 175 aa10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 PF4P02776 101 aa10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 ZNF705DP0CH99 300 aaPredicted RBP10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 ZNF705BP0CI00 300 aaPredicted RBP10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 CRIP1P50238 77 aa10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 FAM3BP58499 235 aaPredicted RBP10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 CD300EQ496F6 205 aaPredicted RBP10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 FAM210BQ96KR6 192 aa10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 SPAG8Q99932 426 aaPredicted RBP10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 CITED1Q99966 193 aa10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 C2CD3Q4AC94 2353 aa10.15□□□□□ -0.78
HLA-DPA1-243ENST00000437811 SMIM27A0A1W2PRY6 76 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 SH2D1AO60880 128 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 CA1P00915 261 aaPredicted RBP10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 ZNF80P51504 273 aaPredicted RBP10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 FAM162BQ5T6X4 162 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 LINC00482Q8N8I6 264 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 BTF3L4Q96K17 158 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 TMA7Q9Y2S6 64 aaKnown RBP10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 TRBV7-9A0A0J9YWB2 115 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 OR4C46A6NHA9 309 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 TCL1AP56279 114 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 KRTAP24-1Q3LI83 254 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 OR2D3Q8NGH3 330 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 TSKUQ8WUA8 353 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 FAM19A4Q96LR4 140 aa10.14□□□□□ -0.79
HLA-DPA1-243ENST00000437811 NF1P21359 2839 aa10.13□□□□□ -0.79
HLA-DPA1-243ENST00000437811 MAST4O15021 2626 aa10.13□□□□□ -0.79
HLA-DPA1-243ENST00000437811 A0A0J9YX75 114 aa10.13□□□□□ -0.79
HLA-DPA1-243ENST00000437811 IZUMO1RA6ND01 250 aa10.13□□□□□ -0.79
HLA-DPA1-243ENST00000437811 A8MWL6 223 aa10.13□□□□□ -0.79
HLA-DPA1-243ENST00000437811 SAP30O75446 220 aa10.13□□□□□ -0.79
HLA-DPA1-243ENST00000437811 TYMSP04818 313 aa10.13□□□□□ -0.79
HLA-DPA1-243ENST00000437811 FOXI2Q6ZQN5 318 aa10.13□□□□□ -0.79
HLA-DPA1-243ENST00000437811 DUSP14O95147 198 aaKnown RBP10.12□□□□□ -0.79
HLA-DPA1-243ENST00000437811 IGLV1-51P01701 117 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms