RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 CDK2AP2O75956 126 aa12.34□□□□□ -0.43
NEDD4-202ENST00000435532 IGHV3-64A0A075B6Q5 118 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 DLX4Q92988 240 aaPredicted RBP12.33□□□□□ -0.44
NEDD4-202ENST00000435532 C5orf56Q8N8D9 126 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 RNF152Q8N8N0 203 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 C4orf3Q8WVX3 66 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 ABCA4P78363 2273 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 IGHV3-16A0A0C4DH30 117 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 INSL3P51460 131 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 DERL1Q9BUN8 251 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 MYMXA0A1B0GTQ4 84 aa12.33□□□□□ -0.44
NEDD4-202ENST00000435532 PLP1P60201 277 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 IGF2BP2-AS1Q96M15 143 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 IGHV7-81A0A0B4J1V7 117 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 ANXA2RQ3ZCQ2 193 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 ADAMTS9Q9P2N4 1935 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 TRAV25A0A0B4J276 109 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 PRSS46E5RG02 174 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 RHOHQ15669 191 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 PIFOQ8TCI5 191 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 C8orf49Q96NF6 230 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 FAM231BA6NCW3 169 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 M0R2P5 195 aa12.32□□□□□ -0.44
NEDD4-202ENST00000435532 KLK5Q9Y337 293 aaPredicted RBP12.32□□□□□ -0.44
NEDD4-202ENST00000435532 IGKV1-39P01597 117 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 IGKV1D-39P04432 117 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 PHF3Q92576 2039 aaKnown RBP12.31□□□□□ -0.44
NEDD4-202ENST00000435532 PAX2Q02962 417 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 PYGO2Q9BRQ0 406 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 K7ERU9 68 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 ZFP36P26651 326 aaKnown RBP12.31□□□□□ -0.44
NEDD4-202ENST00000435532 SRSF3P84103 164 aaKnown RBP12.31□□□□□ -0.44
NEDD4-202ENST00000435532 ZNRF2Q8NHG8 242 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 SPART-AS1P0CW21 52 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 BLCAPP62952 87 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 CT83Q5H943 113 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 ZNF114Q8NC26 417 aa12.31□□□□□ -0.44
NEDD4-202ENST00000435532 A0A0U1RRA0 63 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 IGLC7A0M8Q6 106 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 C19orf84I3L1E1 186 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 SIRPDQ9H106 197 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 PCNX2A6NKB5 2137 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 DNAJC9-AS1A6NH13 148 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 ZNF407Q9C0G0 2248 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 SH2D6Q7Z4S9 175 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 WIPF2Q8TF74 440 aaPredicted RBP12.3□□□□□ -0.44
NEDD4-202ENST00000435532 PRR25Q96S07 402 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 RSPO3Q9BXY4 272 aaPredicted RBP12.3□□□□□ -0.44
NEDD4-202ENST00000435532 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 TMEM141Q96I45 108 aa12.3□□□□□ -0.44
NEDD4-202ENST00000435532 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.29□□□□□ -0.44
NEDD4-202ENST00000435532 Q6ZSR3 168 aa12.29□□□□□ -0.44
NEDD4-202ENST00000435532 ZNF491Q8N8L2 437 aa12.29□□□□□ -0.44
NEDD4-202ENST00000435532 SNAI2O43623 268 aa12.29□□□□□ -0.44
NEDD4-202ENST00000435532 C14orf144Q96I85 54 aa12.29□□□□□ -0.44
NEDD4-202ENST00000435532 SMAD5-AS1Q9Y6J3 95 aa12.29□□□□□ -0.44
NEDD4-202ENST00000435532 TRBV24-1A0A075B6N3 115 aa12.29□□□□□ -0.44
NEDD4-202ENST00000435532 YLPM1P49750 1951 aaKnown RBP12.28□□□□□ -0.44
NEDD4-202ENST00000435532 TSPAN13O95857 204 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 CCL18P55774 89 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 TIMM21Q9BVV7 248 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 LEPROTO15243 131 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 NDUFA11Q86Y39 141 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 GGTLC3B5MD39 225 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 IGHV4-31P0DP07 118 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 AJUBAQ96IF1 538 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 RBAKDNA6NC62 111 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 TNFRSF13BO14836 293 aaPredicted RBP12.28□□□□□ -0.44
NEDD4-202ENST00000435532 CGB7P0DN87 165 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 AMN1Q8IY45 258 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 Q8N9W7 124 aa12.28□□□□□ -0.44
NEDD4-202ENST00000435532 DDTP30046 118 aa12.27□□□□□ -0.44
NEDD4-202ENST00000435532 CACNA1DQ01668 2161 aa12.27□□□□□ -0.44
NEDD4-202ENST00000435532 TNFRSF6BO95407 300 aa12.27□□□□□ -0.44
NEDD4-202ENST00000435532 NOP10Q9NPE3 64 aaKnown RBP12.27□□□□□ -0.44
NEDD4-202ENST00000435532 LENEPQ9Y5L5 61 aa12.27□□□□□ -0.45
NEDD4-202ENST00000435532 GAGE6Q13070 117 aa12.27□□□□□ -0.45
NEDD4-202ENST00000435532 ZNF493Q6ZR52 646 aa12.27□□□□□ -0.45
NEDD4-202ENST00000435532 NKAPP1Q8N9T2 125 aa12.27□□□□□ -0.45
NEDD4-202ENST00000435532 IGHV1-24A0A0C4DH33 117 aa12.27□□□□□ -0.45
NEDD4-202ENST00000435532 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 A0A087WW49 117 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 PRIMA1Q86XR5 153 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 OVOL2Q9BRP0 275 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 USF3Q68DE3 2245 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 PLA2G2AP14555 144 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 ATP5G1P05496 136 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 IGFBPL1Q8WX77 278 aa12.26□□□□□ -0.45
NEDD4-202ENST00000435532 LRRK1Q38SD2 2015 aa12.25□□□□□ -0.45
NEDD4-202ENST00000435532 A6NDX4 124 aa12.25□□□□□ -0.45
NEDD4-202ENST00000435532 Q8N7P7 452 aa12.25□□□□□ -0.45
NEDD4-202ENST00000435532 IGHG2P01859 326 aa12.25□□□□□ -0.45
NEDD4-202ENST00000435532 DENND4CQ5VZ89 1909 aa12.25□□□□□ -0.45
NEDD4-202ENST00000435532 K7EMT4 169 aa12.25□□□□□ -0.45
NEDD4-202ENST00000435532 IGLV11-55A0A075B6I3 123 aa12.25□□□□□ -0.45
NEDD4-202ENST00000435532 FGF23Q9GZV9 251 aaPredicted RBP12.24□□□□□ -0.45
NEDD4-202ENST00000435532 DMRT1Q9Y5R6 373 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms