RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 STPG4Q8N801 248 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 DPF1Q92782 380 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 PIEZO1Q92508 2521 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 IGHV3OR16-8A0A075B7F1 116 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 hDV102S1A0JD36 115 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 LINC01548A6NM66 108 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 PRAC2D3DTV9 90 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 HBDP02042 147 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 HINT1P49773 126 aaPredicted RBP8.03□□□□□ -1.12
CD44-210ENST00000434472 ZNF124Q15973 351 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 LGALS9BQ3B8N2 356 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 LGALS9CQ6DKI2 356 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 C9orf47Q6ZRZ4 202 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 C9orf139Q6ZV77 190 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 ORAOV1Q8WV07 137 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 MAP1LC3AQ9H492 121 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 SCRT2Q9NQ03 307 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 LENEPQ9Y5L5 61 aa8.03□□□□□ -1.12
CD44-210ENST00000434472 DMXL2Q8TDJ6 3036 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 TRAV8-2A0A0B4J237 113 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 LOC389332A0A1B0GUA5 103 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 TCF21O43680 179 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 TRGV3P03979 118 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 IGF1P05019 195 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 FOSL1P15407 271 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 ARL3P36405 182 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 TFPI2P48307 235 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 C8orf86Q6ZUL3 223 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 SMIM15Q7Z3B0 74 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 C10orf105Q8TEF2 133 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 USMG5Q96IX5 58 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 CCL19Q99731 98 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
CD44-210ENST00000434472 TIMM8BQ9Y5J9 83 aaPredicted RBP8.02□□□□□ -1.13
CD44-210ENST00000434472 IGHV3-66A0A0C4DH42 116 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 LINC01546A6NGU7 62 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 NDUFA4O00483 81 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 PSMG4Q5JS54 123 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 CLEC2AQ6UVW9 174 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 C12orf54Q6X4T0 127 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 IL17RELQ6ZVW7 336 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 TMEM219Q86XT9 240 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 RNF182Q8N6D2 247 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 OR1N2Q8NGR9 330 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 PIFOQ8TCI5 191 aa8.01□□□□□ -1.13
CD44-210ENST00000434472 NXT2Q9NPJ8 142 aaKnown RBP8.01□□□□□ -1.13
CD44-210ENST00000434472 TRAV40A0A0B4J280 105 aa8□□□□□ -1.13
CD44-210ENST00000434472 H0Y8G0 127 aa8□□□□□ -1.13
CD44-210ENST00000434472 OVOL1O14753 267 aa8□□□□□ -1.13
CD44-210ENST00000434472 NPYP01303 97 aa8□□□□□ -1.13
CD44-210ENST00000434472 IGF2RP11717 2491 aa8□□□□□ -1.13
CD44-210ENST00000434472 CACNG7P62955 275 aa8□□□□□ -1.13
CD44-210ENST00000434472 ADGRG4Q8IZF6 3080 aa8□□□□□ -1.13
CD44-210ENST00000434472 GLMPQ8WWB7 406 aa8□□□□□ -1.13
CD44-210ENST00000434472 RNF185Q96GF1 192 aa8□□□□□ -1.13
CD44-210ENST00000434472 C16orf92Q96LL3 132 aa8□□□□□ -1.13
CD44-210ENST00000434472 PSMG3-AS1Q96PY0 264 aa8□□□□□ -1.13
CD44-210ENST00000434472 A0A096LNJ9 63 aa8□□□□□ -1.13
CD44-210ENST00000434472 IGHV4-61A0A0C4DH41 118 aa8□□□□□ -1.13
CD44-210ENST00000434472 MUC21A0A0G2JKD1 596 aa8□□□□□ -1.13
CD44-210ENST00000434472 MUC21A0A140T8X8 626 aa8□□□□□ -1.13
CD44-210ENST00000434472 A6NDX4 124 aa8□□□□□ -1.13
CD44-210ENST00000434472 IGHG2P01859 326 aa8□□□□□ -1.13
CD44-210ENST00000434472 COX8AP10176 69 aa8□□□□□ -1.13
CD44-210ENST00000434472 MUC21Q5SSG8 566 aa8□□□□□ -1.13
CD44-210ENST00000434472 ZNF575Q86XF7 245 aa8□□□□□ -1.13
CD44-210ENST00000434472 ZNF738Q8NE65 137 aa8□□□□□ -1.13
CD44-210ENST00000434472 OR8A1Q8NGG7 326 aa8□□□□□ -1.13
CD44-210ENST00000434472 LINC00477Q96M19 166 aa8□□□□□ -1.13
CD44-210ENST00000434472 KALRNO60229 2985 aa7.99□□□□□ -1.13
CD44-210ENST00000434472 IGHV3OR16-10A0A075B7F0 116 aa7.99□□□□□ -1.13
CD44-210ENST00000434472 ZNF207O43670 478 aaKnown RBP7.99□□□□□ -1.13
CD44-210ENST00000434472 LOXL1Q08397 574 aaPredicted RBP7.99□□□□□ -1.13
CD44-210ENST00000434472 FAM106AQ4KMX7 169 aa7.99□□□□□ -1.13
CD44-210ENST00000434472 IFI27L1Q96BM0 104 aa7.99□□□□□ -1.13
CD44-210ENST00000434472 COX11Q9Y6N1 276 aa7.99□□□□□ -1.13
CD44-210ENST00000434472 IGHV4-4A0A075B6R2 117 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 IGHV3OR16-13A0A075B7E8 117 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 IGHV3-74A0A0B4J1X5 117 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 IGKV3D-20A0A0C4DH25 116 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 A0A0G2JLM5 398 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 TMEM8BA6NDV4 472 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 SMKR1H3BMG3 65 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 TNFRSF6BO95407 300 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 NCR2O95944 276 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 FCER1GP30273 86 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 DSCR9P59020 149 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 BRD3OSQ6XYD6 125 aa7.98□□□□□ -1.13
CD44-210ENST00000434472 IGHV3-49A0A0A0MS15 119 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 SNAI2O43623 268 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 MSMBP08118 114 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 NPSP0C0P6 89 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 PPIFP30405 207 aaKnown RBP7.97□□□□□ -1.13
CD44-210ENST00000434472 ATP5J2P56134 94 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 PRSS57Q6UWY2 283 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 Q8N8P6 123 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 OR10J6PQ8NGY7 276 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 MSRB1Q9NZV6 116 aa7.97□□□□□ -1.13
CD44-210ENST00000434472 TRBV7-9A0A0J9YWB2 115 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms