RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 ARL6Q9H0F7 186 aa10.23□□□□□ -0.77
NUP50-209ENST00000432340 TNXBP22105 4242 aa10.22□□□□□ -0.77
NUP50-209ENST00000432340 CCNKO75909 580 aa10.22□□□□□ -0.77
NUP50-209ENST00000432340 ANXA3P12429 323 aa10.22□□□□□ -0.77
NUP50-209ENST00000432340 CD300CQ08708 224 aa10.22□□□□□ -0.77
NUP50-209ENST00000432340 C15orf40Q8WUR7 153 aa10.22□□□□□ -0.77
NUP50-209ENST00000432340 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
NUP50-209ENST00000432340 LINC01600Q96MT4 127 aa10.22□□□□□ -0.77
NUP50-209ENST00000432340 PRADC1Q9BSG0 188 aa10.22□□□□□ -0.77
NUP50-209ENST00000432340 SRRQ9GZT4 340 aa10.22□□□□□ -0.77
NUP50-209ENST00000432340 IAPPP10997 89 aa10.21□□□□□ -0.77
NUP50-209ENST00000432340 CRISP2P16562 243 aa10.21□□□□□ -0.77
NUP50-209ENST00000432340 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.77
NUP50-209ENST00000432340 YIPF6Q96EC8 236 aa10.21□□□□□ -0.77
NUP50-209ENST00000432340 CNBD2Q96M20 576 aa10.21□□□□□ -0.77
NUP50-209ENST00000432340 TP53TG3Q9ULZ0 132 aa10.21□□□□□ -0.77
NUP50-209ENST00000432340 PRSS46E5RG02 174 aa10.2□□□□□ -0.78
NUP50-209ENST00000432340 TMEM229BQ8NBD8 167 aa10.2□□□□□ -0.78
NUP50-209ENST00000432340 SCGB3A2Q96PL1 93 aa10.2□□□□□ -0.78
NUP50-209ENST00000432340 GTSF1LQ9H1H1 148 aa10.2□□□□□ -0.78
NUP50-209ENST00000432340 OR51M1Q9H341 326 aa10.2□□□□□ -0.78
NUP50-209ENST00000432340 MTFP1Q9UDX5 166 aa10.2□□□□□ -0.78
NUP50-209ENST00000432340 DISC1C4P0D8 188 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 SLC17A3O00476 420 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 ZNF253O75346 499 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 VWC2Q2TAL6 325 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 LYZL2Q7Z4W2 148 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 OR4D10Q8NGI6 311 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 C2orf50Q96LR7 162 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 VCX3BQ9H321 246 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 COMMD3Q9UBI1 195 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 PRELID1Q9Y255 219 aa10.19□□□□□ -0.78
NUP50-209ENST00000432340 STRAPQ9Y3F4 350 aaKnown RBP10.19□□□□□ -0.78
NUP50-209ENST00000432340 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 LOC100131303A0A0U1RQF7 123 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 DUXBA0A1W2PPF3 345 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 K7EPK0 472 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 WRBO00258 174 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 SNRPCP09234 159 aaKnown RBP10.18□□□□□ -0.78
NUP50-209ENST00000432340 RAB31Q13636 194 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 ODF1Q14990 250 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 SPANXN5Q5MJ07 72 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 FAM19A4Q96LR4 140 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 GPR132Q9UNW8 380 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 URGCP-MRPS24S4R325 110 aa10.18□□□□□ -0.78
NUP50-209ENST00000432340 TRGV11A0A075B6L2 103 aa10.17□□□□□ -0.78
NUP50-209ENST00000432340 GOSR2O14653 212 aa10.17□□□□□ -0.78
NUP50-209ENST00000432340 SYNGR2O43760 224 aa10.17□□□□□ -0.78
NUP50-209ENST00000432340 CIDEAO60543 219 aa10.17□□□□□ -0.78
NUP50-209ENST00000432340 IGLC2P0DOY2 106 aa10.17□□□□□ -0.78
NUP50-209ENST00000432340 HIST1H1EP10412 219 aaKnown RBP10.17□□□□□ -0.78
NUP50-209ENST00000432340 SLC25A6P12236 298 aa10.17□□□□□ -0.78
NUP50-209ENST00000432340 RHOHQ15669 191 aa10.17□□□□□ -0.78
NUP50-209ENST00000432340 TMEM78Q5T7P6 136 aa10.17□□□□□ -0.78
NUP50-209ENST00000432340 ZNF546Q86UE3 836 aa10.17□□□□□ -0.78
NUP50-209ENST00000432340 SAT2Q96F10 170 aaPredicted RBP10.17□□□□□ -0.78
NUP50-209ENST00000432340 H3BTX0 84 aa10.16□□□□□ -0.78
NUP50-209ENST00000432340 COX7A2P2O60397 106 aa10.16□□□□□ -0.78
NUP50-209ENST00000432340 PITX3O75364 302 aa10.16□□□□□ -0.78
NUP50-209ENST00000432340 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
NUP50-209ENST00000432340 RPS19P39019 145 aaKnown RBP10.16□□□□□ -0.78
NUP50-209ENST00000432340 OR52I2Q8NH67 350 aa10.16□□□□□ -0.78
NUP50-209ENST00000432340 PRRT1Q99946 306 aa10.16□□□□□ -0.78
NUP50-209ENST00000432340 AGPAT4-IT1Q9H0P7 198 aa10.16□□□□□ -0.78
NUP50-209ENST00000432340 TRBV7-9A0A0J9YWB2 115 aa10.15□□□□□ -0.78
NUP50-209ENST00000432340 OR10J4P0C629 311 aa10.15□□□□□ -0.78
NUP50-209ENST00000432340 SSBP1Q04837 148 aaKnown RBP10.15□□□□□ -0.78
NUP50-209ENST00000432340 ERCC8Q13216 396 aa10.15□□□□□ -0.78
NUP50-209ENST00000432340 PATE2Q6UY27 113 aa10.15□□□□□ -0.78
NUP50-209ENST00000432340 OR10G9Q8NGN4 311 aa10.15□□□□□ -0.78
NUP50-209ENST00000432340 ZC2HC1AQ96GY0 325 aa10.15□□□□□ -0.78
NUP50-209ENST00000432340 NPVFQ9HCQ7 196 aa10.15□□□□□ -0.78
NUP50-209ENST00000432340 SLC39A9Q9NUM3 307 aa10.15□□□□□ -0.78
NUP50-209ENST00000432340 TRBV6-4A0A1B0GX49 114 aa10.14□□□□□ -0.79
NUP50-209ENST00000432340 FBLL1A6NHQ2 334 aaKnown RBP10.14□□□□□ -0.79
NUP50-209ENST00000432340 FNDC10F2Z333 226 aa10.14□□□□□ -0.79
NUP50-209ENST00000432340 M0R2P5 195 aa10.14□□□□□ -0.79
NUP50-209ENST00000432340 ZFAND2AQ8N6M9 145 aa10.14□□□□□ -0.79
NUP50-209ENST00000432340 A0A087WWC5 75 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 A0A0J9YXV3 536 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 FAM25AB3EWG3 89 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 FAM25CB3EWG5 89 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 FAM25GB3EWG6 89 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 ANKRD65E5RJM6 399 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 H3BQ15 152 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 ELOBQ15370 118 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 BAK1Q16611 211 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 C10orf113Q5VZT2 155 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 DGAT2L7PQ6IED9 249 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 FAM159AQ6UWV7 190 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 DAZ4Q86SG3 579 aaKnown RBP10.13□□□□□ -0.79
NUP50-209ENST00000432340 DAZ3Q9NR90 486 aaKnown RBP10.13□□□□□ -0.79
NUP50-209ENST00000432340 MGAT4CQ9UBM8 478 aa10.13□□□□□ -0.79
NUP50-209ENST00000432340 MZT2AQ6P582 158 aa10.12□□□□□ -0.79
NUP50-209ENST00000432340 SLC25A29Q8N8R3 303 aa10.12□□□□□ -0.79
NUP50-209ENST00000432340 ATP5SQ99766 215 aa10.12□□□□□ -0.79
NUP50-209ENST00000432340 AAMDCQ9H7C9 122 aa10.12□□□□□ -0.79
NUP50-209ENST00000432340 PRR13Q9NZ81 148 aa10.12□□□□□ -0.79
NUP50-209ENST00000432340 Q0VG73 95 aa10.11□□□□□ -0.79
NUP50-209ENST00000432340 PDE6HQ13956 83 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms