RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TMEM114B3SHH9 223 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 H3BSH0 61 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 OVOL1O14753 267 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 SERPINE1P05121 402 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 P0DMU3 169 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 FAM231AP0DMU4 169 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 FAM231CP0DMU5 169 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 ALDH3A1P30838 453 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 MAP2K4P45985 399 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 RAB13P51153 203 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 CAV3P56539 151 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 ERVS71-1P61550 626 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 PRDX4Q13162 271 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 BATFQ16520 125 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 KRTAP13-4Q3LI77 160 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 ACSM3Q53FZ2 586 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 PABPC1L2AQ5JQF8 200 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 FAM201AQ5SY85 155 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 MINOS1Q5TGZ0 78 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 FAM27BQ5VT28 67 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 SLC51BQ86UW2 128 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 LRRC18Q8N456 261 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 CLDN22Q8N7P3 220 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 ZNF565Q8N9K5 539 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 CDC26Q8NHZ8 85 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 RAB2BQ8WUD1 216 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 C4orf3Q8WVX3 66 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 C1orf54Q8WWF1 131 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 H1FXQ92522 213 aaKnown RBP1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 DIRAS2Q96HU8 199 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 GLTPQ9NZD2 209 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 AK3Q9UIJ7 227 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 PXMP4Q9Y6I8 212 aa1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 SRRM2Q9UQ35 2752 aaKnown RBP1.26□□□□□ -2.21
HMGB1P27-201ENST00000431429 DNAH7Q8WXX0 4024 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 HECTD4Q9Y4D8 3996 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 TRAV36DV7A0A075B6V5 113 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 A0A087WUJ7 227 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 EXOC1LA0A1B0GW35 172 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 IQCF6A8MYZ5 107 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 INMT-MINDY4F8WBC2 141 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 M0R036 132 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 BHLHE40O14503 412 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 UBE2L6O14933 153 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 PLA2G10O15496 165 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 SERPINA1P01009 418 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 IFNA21P01568 189 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 IFNA17P01571 189 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 GYPAP02724 150 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 DBIP07108 87 aaKnown RBP1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 CST2P09228 141 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 RPS4Y1P22090 263 aaKnown RBP1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 TCL1AP56279 114 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 SNCBQ16143 134 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 TEX36Q5VZQ5 186 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 C8orf74Q6P047 294 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 SLC35E3Q7Z769 313 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 DYNAPQ8N1N2 210 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 LHFPL5Q8TAF8 219 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 SLC35B4Q969S0 331 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 NMNAT3Q96T66 252 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 MIEN1Q9BRT3 115 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 MRPS26Q9BYN8 205 aaKnown RBP1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 TTTY13Q9BZ97 58 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 GPR84Q9NQS5 396 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 CALML5Q9NZT1 146 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 PRELID1Q9Y255 219 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 ERGIC3Q9Y282 383 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 RBM7Q9Y580 266 aaKnown RBP1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 DYNC2H1Q8NCM8 4307 aaKnown RBP1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 DNAH3Q8TD57 4116 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 FRAS1Q86XX4 4008 aa1.25□□□□□ -2.21
HMGB1P27-201ENST00000431429 MUC4Q99102 2169 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 OOSP1A8MZH6 123 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 IFNA10P01566 189 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 RBP4P02753 201 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 S100A6P06703 90 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 PRB4P10163 310 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 FXYD7P58549 80 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 POLR2GP62487 172 aaKnown RBP eCLIP1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 RUNX1Q01196 453 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 KLRD1Q13241 179 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 PMAIP1Q13794 54 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 MIAQ16674 131 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 LIN52Q52LA3 116 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 SPRNQ5BIV9 151 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 C1orf134Q5TEV5 83 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR2T2Q6IF00 324 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 C3orf62Q6ZUJ4 267 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 LHFPL1Q86WI0 220 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 CTAGE3PQ8IX95 158 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR5AS1Q8N127 324 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 SLC35F6Q8N357 371 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR11H6Q8NGC7 330 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR52L1Q8NGH7 329 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR5J2Q8NH18 312 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 SPACA4Q8TDM5 124 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 TMEM106AQ96A25 262 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms