RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 FAM181BA6NEQ2 426 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 C2orf70A6NJV1 201 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 NDUFA4O00483 81 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 ZNF207O43670 478 aaKnown RBP10.68□□□□□ -0.7
HOXC4-202ENST00000430889 HSBP1O75506 76 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 NTF3P20783 257 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 BMI1P35226 326 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 RPS20P60866 119 aaKnown RBP10.68□□□□□ -0.7
HOXC4-202ENST00000430889 EBLN2Q6P2I7 272 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 RNASEKQ6P5S7 137 aaKnown RBP10.68□□□□□ -0.7
HOXC4-202ENST00000430889 LYZL1Q6UWQ5 148 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 LURAP1LQ8IV03 231 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 LINC01356Q8N9X3 169 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 PPP1R14DQ9NXH3 145 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 CRYBG3Q68DQ2 2970 aa10.68□□□□□ -0.7
HOXC4-202ENST00000430889 CR1P17927 2039 aa10.67□□□□□ -0.7
HOXC4-202ENST00000430889 IGHV3OR16-13A0A075B7E8 117 aa10.67□□□□□ -0.7
HOXC4-202ENST00000430889 IGHV3-74A0A0B4J1X5 117 aa10.67□□□□□ -0.7
HOXC4-202ENST00000430889 M0QZ24 198 aa10.67□□□□□ -0.7
HOXC4-202ENST00000430889 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
HOXC4-202ENST00000430889 GPHB5Q86YW7 130 aa10.67□□□□□ -0.7
HOXC4-202ENST00000430889 CNFNQ9BYD5 112 aa10.67□□□□□ -0.7
HOXC4-202ENST00000430889 KLK15Q9H2R5 256 aa10.67□□□□□ -0.7
HOXC4-202ENST00000430889 U3KQK5 164 aa10.67□□□□□ -0.7
HOXC4-202ENST00000430889 UTP20O75691 2785 aaKnown RBP10.67□□□□□ -0.7
HOXC4-202ENST00000430889 IGHV3-49A0A0A0MS15 119 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 M0R2Z0 102 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 LINC01559Q495D7 138 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 CYB5R2Q6BCY4 276 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 TMEM213A2RRL7 107 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 J3QLI3 93 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 SOCS3O14543 225 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 SMAD7O15105 426 aaKnown RBP10.66□□□□□ -0.7
HOXC4-202ENST00000430889 FSHBP01225 129 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 COX6B1P14854 86 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 VAMP8Q9BV40 100 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 CLEC5AQ9NY25 188 aa10.66□□□□□ -0.7
HOXC4-202ENST00000430889 TMSB15BA0A087X1C1 80 aa10.65□□□□□ -0.7
HOXC4-202ENST00000430889 IGHV1-24A0A0C4DH33 117 aa10.65□□□□□ -0.7
HOXC4-202ENST00000430889 LINC00614P0C842 121 aa10.65□□□□□ -0.7
HOXC4-202ENST00000430889 IL17RELQ6ZVW7 336 aa10.65□□□□□ -0.7
HOXC4-202ENST00000430889 BORCS7Q96B45 105 aa10.65□□□□□ -0.7
HOXC4-202ENST00000430889 FABP5P3A8MUU1 101 aa10.64□□□□□ -0.71
HOXC4-202ENST00000430889 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
HOXC4-202ENST00000430889 C9orf139Q6ZV77 190 aa10.64□□□□□ -0.71
HOXC4-202ENST00000430889 SPATA12Q7Z6I5 190 aa10.64□□□□□ -0.71
HOXC4-202ENST00000430889 FER1L6-AS1Q8NA97 138 aa10.64□□□□□ -0.71
HOXC4-202ENST00000430889 C20orf173Q96LM9 149 aa10.64□□□□□ -0.71
HOXC4-202ENST00000430889 C2orf88Q9BSF0 95 aa10.64□□□□□ -0.71
HOXC4-202ENST00000430889 PAM16Q9Y3D7 125 aa10.64□□□□□ -0.71
HOXC4-202ENST00000430889 CRXO43186 299 aaPredicted RBP10.63□□□□□ -0.71
HOXC4-202ENST00000430889 RAB4AP20338 218 aa10.63□□□□□ -0.71
HOXC4-202ENST00000430889 ZNF138P52744 262 aa10.63□□□□□ -0.71
HOXC4-202ENST00000430889 LOXL1Q08397 574 aaPredicted RBP10.63□□□□□ -0.71
HOXC4-202ENST00000430889 DEFB112Q30KQ8 113 aa10.63□□□□□ -0.71
HOXC4-202ENST00000430889 LBHQ53QV2 105 aaPredicted RBP10.63□□□□□ -0.71
HOXC4-202ENST00000430889 MIEN1Q9BRT3 115 aa10.63□□□□□ -0.71
HOXC4-202ENST00000430889 MYO18BQ8IUG5 2567 aa10.63□□□□□ -0.71
HOXC4-202ENST00000430889 IGHV4-59P01825 116 aa10.63□□□□□ -0.71
HOXC4-202ENST00000430889 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
HOXC4-202ENST00000430889 HIST1H1AQ02539 215 aaPredicted RBP10.63□□□□□ -0.71
HOXC4-202ENST00000430889 OR4X2Q8NGF9 303 aa10.63□□□□□ -0.71
HOXC4-202ENST00000430889 TPPP3Q9BW30 176 aa10.63□□□□□ -0.71
HOXC4-202ENST00000430889 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
HOXC4-202ENST00000430889 ZNF462Q96JM2 2506 aa10.62□□□□□ -0.71
HOXC4-202ENST00000430889 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
HOXC4-202ENST00000430889 A0A0G2JLM5 398 aa10.62□□□□□ -0.71
HOXC4-202ENST00000430889 EREGO14944 169 aa10.62□□□□□ -0.71
HOXC4-202ENST00000430889 IGHV3-11P01762 117 aa10.62□□□□□ -0.71
HOXC4-202ENST00000430889 PF4V1P10720 104 aa10.62□□□□□ -0.71
HOXC4-202ENST00000430889 PMCHL1Q16048 86 aa10.62□□□□□ -0.71
HOXC4-202ENST00000430889 LINC00173Q6ZV60 143 aa10.62□□□□□ -0.71
HOXC4-202ENST00000430889 ANKRD17O75179 2603 aaKnown RBP10.61□□□□□ -0.71
HOXC4-202ENST00000430889 OR5AL1P0C617 328 aa10.61□□□□□ -0.71
HOXC4-202ENST00000430889 PSMB8P28062 276 aa10.61□□□□□ -0.71
HOXC4-202ENST00000430889 PRRC2AP48634 2157 aaKnown RBP10.61□□□□□ -0.71
HOXC4-202ENST00000430889 KRTAP10-9P60411 292 aa10.61□□□□□ -0.71
HOXC4-202ENST00000430889 MRPL51Q4U2R6 128 aaKnown RBP10.61□□□□□ -0.71
HOXC4-202ENST00000430889 LCNL1Q6ZST4 164 aa10.61□□□□□ -0.71
HOXC4-202ENST00000430889 MRPL52Q86TS9 123 aaKnown RBP10.61□□□□□ -0.71
HOXC4-202ENST00000430889 AMN1Q8IY45 258 aa10.61□□□□□ -0.71
HOXC4-202ENST00000430889 SNHG12Q9BXW3 62 aa10.61□□□□□ -0.71
HOXC4-202ENST00000430889 NPFFR1Q9GZQ6 430 aa10.61□□□□□ -0.71
HOXC4-202ENST00000430889 LENEPQ9Y5L5 61 aa10.61□□□□□ -0.71
HOXC4-202ENST00000430889 TMEM78Q5T7P6 136 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 C16orf92Q96LL3 132 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 TMEM70Q9BUB7 260 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 CSPG4Q6UVK1 2322 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 IGHV7-4-1A0A0J9YVY3 117 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 A1L4Q6 167 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 TMEM89A2RUT3 159 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 D6R8Y8 96 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 ORM1P02763 201 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 IGHV4-31P0DP07 118 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 TMEM95Q3KNT9 176 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 SPATA45Q537H7 98 aa10.6□□□□□ -0.71
HOXC4-202ENST00000430889 RNF185Q96GF1 192 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms