RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 CT83Q5H943 113 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 RNF182Q8N6D2 247 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 KLHDC1Q8N7A1 406 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 JMJD8Q96S16 334 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 NDFIP1Q9BT67 221 aa5.59□□□□□ -1.51
COL28A1-202ENST00000430711 ZANQ9Y493 2812 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 IGHV3-49A0A0A0MS15 119 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 IGHV2-70DA0A0C4DH43 119 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 A0A1B0GUT8 65 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 NPYP01303 97 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 PCP4P48539 62 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 RHOGP84095 191 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 RELQ04864 619 aaPredicted RBP5.58□□□□□ -1.52
COL28A1-202ENST00000430711 LINC01545Q5VT33 79 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 ETFRF1Q6IPR1 90 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 STXBP6Q8NFX7 210 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 TMEM14CQ9P0S9 112 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 HIVEP3Q5T1R4 2406 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 WI2-2373I1.2A0A1W2PRP0 233 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 APOBEC3AP31941 199 aaPredicted RBP5.58□□□□□ -1.52
COL28A1-202ENST00000430711 DEFB1P60022 68 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 PAX8Q06710 450 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 TM4SF20Q53R12 229 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 AMMECR1LQ6DCA0 310 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 PCP2Q8IVA1 136 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 CHCHD1Q96BP2 118 aaKnown RBP5.58□□□□□ -1.52
COL28A1-202ENST00000430711 GFRA4Q9GZZ7 299 aa5.58□□□□□ -1.52
COL28A1-202ENST00000430711 NPIPB5A8MRT5 1133 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 ZFP36P26651 326 aaKnown RBP5.57□□□□□ -1.52
COL28A1-202ENST00000430711 PSG9Q00887 426 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 HES1Q14469 280 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 MRPL51Q4U2R6 128 aaKnown RBP5.57□□□□□ -1.52
COL28A1-202ENST00000430711 ZNF738Q8NE65 137 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 C22orf15Q8WYQ4 148 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 C11orf21Q9P2W6 132 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 DKK2Q9UBU2 259 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 AKAP9Q99996 3911 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 IGLV11-55A0A075B6I3 123 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 IGKV2D-26A0A0A0MRZ7 120 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 NBR2O15453 112 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 EVI2AP22794 236 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 UCNP55089 124 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 CACNG7P62955 275 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 VAMP3Q15836 100 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 SLC25A34Q6PIV7 304 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 TNFRSF14Q92956 283 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 SMIM12Q96EX1 92 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 C18orf15Q96N68 181 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 ST20Q9HBF5 79 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 AP5S1Q9NUS5 200 aa5.57□□□□□ -1.52
COL28A1-202ENST00000430711 CCL21O00585 134 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 ZNF207O43670 478 aaKnown RBP5.56□□□□□ -1.52
COL28A1-202ENST00000430711 LIPFP07098 398 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 CD3EP07766 207 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 PAX2Q02962 417 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 BPIFA4PQ86YQ2 179 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 DEFB125Q8N687 156 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 MAP1LC3CQ9BXW4 147 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 NCBP2LA6PVI3 153 aaKnown RBP5.56□□□□□ -1.52
COL28A1-202ENST00000430711 GNG7O60262 68 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 SAP30O75446 220 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 TRGV3P03979 118 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 CTSGP08311 255 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 OR5AL1P0C617 328 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 S100A7P31151 101 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 LY6G5BQ8NDX9 201 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 PRSS3P2Q8NHM4 247 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 RNF185Q96GF1 192 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 RABAC1Q9UI14 185 aa5.56□□□□□ -1.52
COL28A1-202ENST00000430711 CREBBPQ92793 2442 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 FLNCQ14315 2725 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 TRAV26-2A0A0B4J265 109 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 B9A039 149 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 NDUFA3O95167 84 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 IGF1P05019 195 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 C5orf64Q2M2E5 130 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 GATD1Q8NB37 220 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 DEFB104AQ8WTQ1 72 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 AJUBAQ96IF1 538 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 PRELID3AQ96N28 172 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 PRR25Q96S07 402 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 TMEM191AQ9H0A3 160 aa5.55□□□□□ -1.52
COL28A1-202ENST00000430711 SOX21Q9Y651 276 aaPredicted RBP5.55□□□□□ -1.52
COL28A1-202ENST00000430711 ODF3BA8MYP8 253 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 G3V318 75 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 COX8AP10176 69 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 GPR183P32249 361 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 ADORA2A-AS1P86434 159 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 FAM104BQ5XKR9 115 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 IL17RELQ6ZVW7 336 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 OR4C5Q8NGB2 326 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 LINC00527Q9UJ94 153 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 IGHV7-81A0A0B4J1V7 117 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 TMEM189A5PLL7 270 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 FAM231BA6NCW3 169 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 ZNF493Q6ZR52 646 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 FA2HQ7L5A8 372 aa5.54□□□□□ -1.52
COL28A1-202ENST00000430711 VMO1Q7Z5L0 202 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms