RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 NMBP08949 121 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 CT45A10P0DMU9 189 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 PRB4P10163 310 aaPredicted RBP13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 CDKN1BP46527 198 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 CCL20P78556 96 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 ERCC8Q13216 396 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 DEFB135Q30KP9 77 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 CCDC28AQ8IWP9 274 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 OVOL2Q9BRP0 275 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 ZNF492Q9P255 531 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 XCL2Q9UBD3 114 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 LENEPQ9Y5L5 61 aa13.22□□□□□ -0.29
CDC42EP1-203ENST00000430687 FBLL1A6NHQ2 334 aaKnown RBP13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 LEPP41159 167 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 ZNF138P52744 262 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 SPINK13Q1W4C9 94 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 CST9LP1Q5W188 147 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 GOLT1AQ6ZVE7 132 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 ZNF680Q8NEM1 530 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 LYPD6BQ8NI32 183 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 HIST1H2BAQ96A08 127 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 FAM19A4Q96LR4 140 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 IGF2BP2-AS1Q96M15 143 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 VGLL1Q99990 258 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 TXNDC17Q9BRA2 123 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 ATG101Q9BSB4 218 aa13.21□□□□□ -0.29
CDC42EP1-203ENST00000430687 F6UZH7 168 aa13.2□□□□□ -0.3
CDC42EP1-203ENST00000430687 M0R2Z0 102 aa13.2□□□□□ -0.3
CDC42EP1-203ENST00000430687 IFNA1P01562 189 aa13.2□□□□□ -0.3
CDC42EP1-203ENST00000430687 TAGLN2P37802 199 aaKnown RBP13.2□□□□□ -0.3
CDC42EP1-203ENST00000430687 FXYD7P58549 80 aa13.2□□□□□ -0.3
CDC42EP1-203ENST00000430687 GNG5P63218 68 aa13.2□□□□□ -0.3
CDC42EP1-203ENST00000430687 CYB561D1Q8N8Q1 229 aa13.2□□□□□ -0.3
CDC42EP1-203ENST00000430687 GNG13Q9P2W3 67 aa13.2□□□□□ -0.3
CDC42EP1-203ENST00000430687 RPH3ALQ9UNE2 315 aa13.2□□□□□ -0.3
CDC42EP1-203ENST00000430687 CRXO43186 299 aaPredicted RBP13.19□□□□□ -0.3
CDC42EP1-203ENST00000430687 CRISP2P16562 243 aa13.19□□□□□ -0.3
CDC42EP1-203ENST00000430687 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
CDC42EP1-203ENST00000430687 INSP01308 110 aa13.18□□□□□ -0.3
CDC42EP1-203ENST00000430687 ZNF705AQ6ZN79 300 aaPredicted RBP13.18□□□□□ -0.3
CDC42EP1-203ENST00000430687 RETNQ9HD89 108 aa13.18□□□□□ -0.3
CDC42EP1-203ENST00000430687 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
CDC42EP1-203ENST00000430687 U3KQK5 164 aa13.18□□□□□ -0.3
CDC42EP1-203ENST00000430687 AGRNO00468 2067 aa13.17□□□□□ -0.3
CDC42EP1-203ENST00000430687 PRKDCP78527 4128 aaKnown RBP13.17□□□□□ -0.3
CDC42EP1-203ENST00000430687 KLLNB2CW77 178 aa13.17□□□□□ -0.3
CDC42EP1-203ENST00000430687 C11orf94C9JXX5 98 aa13.17□□□□□ -0.3
CDC42EP1-203ENST00000430687 PEX7O00628 323 aa13.17□□□□□ -0.3
CDC42EP1-203ENST00000430687 ATP5G3P48201 142 aa13.17□□□□□ -0.3
CDC42EP1-203ENST00000430687 TMEM75Q8N9X5 138 aa13.17□□□□□ -0.3
CDC42EP1-203ENST00000430687 RARRES2Q99969 163 aa13.17□□□□□ -0.3
CDC42EP1-203ENST00000430687 TMEM256Q8N2U0 113 aa13.16□□□□□ -0.3
CDC42EP1-203ENST00000430687 OR11H2Q8NH07 326 aa13.16□□□□□ -0.3
CDC42EP1-203ENST00000430687 NEU1Q99519 415 aa13.16□□□□□ -0.3
CDC42EP1-203ENST00000430687 TRAV12-2A0A075B6T6 113 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 SMIM9A6NGZ8 99 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 BCL2P10415 239 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 FLI1Q01543 452 aaPredicted RBP13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 C1orf158Q8N1D5 194 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 ZFAND2AQ8N6M9 145 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 Q8TAT8 98 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 NDFIP1Q9BT67 221 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 VAX2Q9UIW0 290 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 PSG8Q9UQ74 426 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 KLF12Q9Y4X4 402 aa13.15□□□□□ -0.3
CDC42EP1-203ENST00000430687 TRAV8-1A0A0A6YYK1 113 aa13.14□□□□□ -0.31
CDC42EP1-203ENST00000430687 IGLV2-11P01706 119 aa13.14□□□□□ -0.31
CDC42EP1-203ENST00000430687 S100A9P06702 114 aaKnown RBP13.14□□□□□ -0.31
CDC42EP1-203ENST00000430687 GPX1P07203 203 aa13.14□□□□□ -0.31
CDC42EP1-203ENST00000430687 MEF2BQ02080 365 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP1-203ENST00000430687 SAPCD1Q5SSQ6 148 aa13.14□□□□□ -0.31
CDC42EP1-203ENST00000430687 GFI1BQ5VTD9 330 aa13.14□□□□□ -0.31
CDC42EP1-203ENST00000430687 FMC1Q96HJ9 113 aa13.14□□□□□ -0.31
CDC42EP1-203ENST00000430687 X6R8D5 127 aa13.14□□□□□ -0.31
CDC42EP1-203ENST00000430687 TRBV6-1A0A0K0K1D8 114 aa13.13□□□□□ -0.31
CDC42EP1-203ENST00000430687 C7orf71A4D174 169 aa13.13□□□□□ -0.31
CDC42EP1-203ENST00000430687 PDE6DO43924 150 aa13.13□□□□□ -0.31
CDC42EP1-203ENST00000430687 MIFP14174 115 aa13.13□□□□□ -0.31
CDC42EP1-203ENST00000430687 TMEM208Q9BTX3 173 aa13.13□□□□□ -0.31
CDC42EP1-203ENST00000430687 H7BYZ3 331 aa13.12□□□□□ -0.31
CDC42EP1-203ENST00000430687 KIR3DS1Q14943 382 aa13.12□□□□□ -0.31
CDC42EP1-203ENST00000430687 C11orf52Q96A22 123 aa13.12□□□□□ -0.31
CDC42EP1-203ENST00000430687 LINC00479Q96M42 142 aa13.12□□□□□ -0.31
CDC42EP1-203ENST00000430687 NIPSNAP3BQ9BS92 247 aa13.12□□□□□ -0.31
CDC42EP1-203ENST00000430687 TREM1Q9NP99 234 aa13.12□□□□□ -0.31
CDC42EP1-203ENST00000430687 IGHV3OR16-12A0A075B7B8 117 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 LOC102723971A0A1B0GUV8 181 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 RBFOX3A6NFN3 312 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 J3KRW8 73 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 RNASE4P34096 147 aaKnown RBP13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 AKR1C3P42330 323 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 UBE2G1P62253 170 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 TMEM183BQ1AE95 376 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 ZNF767PQ75MW2 155 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 PRNTQ86SH4 94 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 C2CD4CQ8TF44 421 aa13.11□□□□□ -0.31
CDC42EP1-203ENST00000430687 TVP23CQ96ET8 276 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms