RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ZNF503Q96F45 646 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 PHYHIPLQ96FC7 376 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 VGLL1Q99990 258 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 AGPAT4-IT1Q9H0P7 198 aa8.17□□□□□ -1.1
HDAC4-202ENST00000430200 C7orf71A4D174 169 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 ZNF324O75467 553 aaPredicted RBP8.16□□□□□ -1.1
HDAC4-202ENST00000430200 MED14OSP0DP75 135 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 PVALBP20472 110 aaPredicted RBP8.16□□□□□ -1.1
HDAC4-202ENST00000430200 LEPP41159 167 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 SSX7Q7RTT5 188 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 FXYD5Q96DB9 178 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 MRPL53Q96EL3 112 aaKnown RBP8.16□□□□□ -1.1
HDAC4-202ENST00000430200 VSIG2Q96IQ7 327 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 ATG101Q9BSB4 218 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 GSN-AS1Q9NRJ2 163 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 TP53TG3Q9ULZ0 132 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 RNF24Q9Y225 148 aa8.16□□□□□ -1.1
HDAC4-202ENST00000430200 OR10J4P0C629 311 aa8.15□□□□□ -1.1
HDAC4-202ENST00000430200 HIST1H1EP10412 219 aaKnown RBP8.15□□□□□ -1.1
HDAC4-202ENST00000430200 HBG1P69891 147 aa8.15□□□□□ -1.1
HDAC4-202ENST00000430200 HBG2P69892 147 aa8.15□□□□□ -1.1
HDAC4-202ENST00000430200 RAB31Q13636 194 aa8.15□□□□□ -1.1
HDAC4-202ENST00000430200 ICAM4Q14773 271 aa8.15□□□□□ -1.1
HDAC4-202ENST00000430200 FAM122CQ6P4D5 195 aa8.15□□□□□ -1.1
HDAC4-202ENST00000430200 KLF12Q9Y4X4 402 aa8.15□□□□□ -1.1
HDAC4-202ENST00000430200 A6NHS1 94 aa8.14□□□□□ -1.11
HDAC4-202ENST00000430200 CRISP2P16562 243 aa8.14□□□□□ -1.11
HDAC4-202ENST00000430200 FAM3BP58499 235 aaPredicted RBP8.14□□□□□ -1.11
HDAC4-202ENST00000430200 OR5I1Q13606 314 aa8.14□□□□□ -1.11
HDAC4-202ENST00000430200 PDE6HQ13956 83 aa8.14□□□□□ -1.11
HDAC4-202ENST00000430200 MZT2BQ6NZ67 158 aa8.14□□□□□ -1.11
HDAC4-202ENST00000430200 LINC00299Q6ZSB3 139 aa8.14□□□□□ -1.11
HDAC4-202ENST00000430200 ENKURQ8TC29 256 aa8.14□□□□□ -1.11
HDAC4-202ENST00000430200 RXFP4Q8TDU9 374 aa8.14□□□□□ -1.11
HDAC4-202ENST00000430200 PYGO2Q9BRQ0 406 aa8.14□□□□□ -1.11
HDAC4-202ENST00000430200 WDR61Q9GZS3 305 aaKnown RBP8.14□□□□□ -1.11
HDAC4-202ENST00000430200 SNURFLB1AK76 121 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 MPDU1O75352 247 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 RLN2P04090 185 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 SLC25A5P05141 298 aaKnown RBP8.13□□□□□ -1.11
HDAC4-202ENST00000430200 M6PRP20645 277 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 DAZ2Q13117 558 aaKnown RBP8.13□□□□□ -1.11
HDAC4-202ENST00000430200 ATP6V1FQ16864 119 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 ESRGQ1W209 222 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 C9orf47Q6ZRZ4 202 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 C6orf223Q8N319 242 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 S100ZQ8WXG8 99 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 GNPNAT1Q96EK6 184 aaPredicted RBP8.13□□□□□ -1.11
HDAC4-202ENST00000430200 NMES1Q9C002 83 aa8.13□□□□□ -1.11
HDAC4-202ENST00000430200 A0A096LPF7 62 aa8.12□□□□□ -1.11
HDAC4-202ENST00000430200 E5RGE8 158 aa8.12□□□□□ -1.11
HDAC4-202ENST00000430200 RNASE4P34096 147 aaKnown RBP8.12□□□□□ -1.11
HDAC4-202ENST00000430200 TCL1AP56279 114 aa8.12□□□□□ -1.11
HDAC4-202ENST00000430200 PPP1R1CQ8WVI7 109 aa8.12□□□□□ -1.11
HDAC4-202ENST00000430200 LINC00467Q9BRT7 94 aa8.12□□□□□ -1.11
HDAC4-202ENST00000430200 WFDC1Q9HC57 220 aa8.12□□□□□ -1.11
HDAC4-202ENST00000430200 MRPL16Q9NX20 251 aaKnown RBP8.12□□□□□ -1.11
HDAC4-202ENST00000430200 PTTG2Q9NZH5 202 aa8.12□□□□□ -1.11
HDAC4-202ENST00000430200 TIMM9Q9Y5J7 89 aa8.12□□□□□ -1.11
HDAC4-202ENST00000430200 INMT-MINDY4F8WBC2 141 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 SPINK4O60575 86 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 CCL18P55774 89 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 SOHLH1Q5JUK2 328 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 CCDC28AQ8IWP9 274 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 EIF4E3Q8N5X7 224 aaKnown RBP8.11□□□□□ -1.11
HDAC4-202ENST00000430200 MARVELD1Q9BSK0 173 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 UPK3BQ9BT76 320 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 SMIM3Q9BZL3 60 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 OR51M1Q9H341 326 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 ZNF492Q9P255 531 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 FUT9Q9Y231 359 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 HSPB11Q9Y547 144 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 FAT1Q14517 4588 aa8.11□□□□□ -1.11
HDAC4-202ENST00000430200 TRGV1A0A0A0MS02 117 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 MPC2O95563 127 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 IGHV3-53P01767 116 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 KRTAP10-2P60368 255 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 ANXA2RQ3ZCQ2 193 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 C18orf15Q96N68 181 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 ATP5SQ99766 215 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 PAXXQ9BUH6 204 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 MRPL32Q9BYC8 188 aaKnown RBP8.1□□□□□ -1.11
HDAC4-202ENST00000430200 Q9H3A6 140 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 Q9H8V8 135 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 MBD2Q9UBB5 411 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 PRELID1Q9Y255 219 aa8.1□□□□□ -1.11
HDAC4-202ENST00000430200 MRPS16Q9Y3D3 137 aaKnown RBP8.1□□□□□ -1.11
HDAC4-202ENST00000430200 OR7C2O60412 319 aa8.09□□□□□ -1.11
HDAC4-202ENST00000430200 PRAF2O60831 178 aa8.09□□□□□ -1.11
HDAC4-202ENST00000430200 UBE2L3P68036 154 aaKnown RBP8.09□□□□□ -1.11
HDAC4-202ENST00000430200 FFAR4Q5NUL3 377 aa8.09□□□□□ -1.11
HDAC4-202ENST00000430200 MUC21Q5SSG8 566 aa8.09□□□□□ -1.11
HDAC4-202ENST00000430200 Q6ZRN7 208 aaPredicted RBP8.09□□□□□ -1.11
HDAC4-202ENST00000430200 ZNF680Q8NEM1 530 aa8.09□□□□□ -1.11
HDAC4-202ENST00000430200 LINC00477Q96M19 166 aa8.09□□□□□ -1.11
HDAC4-202ENST00000430200 SLC25A31Q9H0C2 315 aa8.09□□□□□ -1.11
HDAC4-202ENST00000430200 AAMDCQ9H7C9 122 aa8.09□□□□□ -1.11
HDAC4-202ENST00000430200 TRGV2A0A075B6R0 118 aa8.08□□□□□ -1.12
HDAC4-202ENST00000430200 IGHV1OR15-1A0A075B7D0 117 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms