RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 ERCC8Q13216 396 aa15.13■□□□□ 0.01
CASC4-203ENST00000429162 PEF1Q9UBV8 284 aaKnown RBP15.13■□□□□ 0.01
CASC4-203ENST00000429162 SMAD7O15105 426 aaKnown RBP15.13■□□□□ 0.01
CASC4-203ENST00000429162 ARMS2P0C7Q2 107 aa15.13■□□□□ 0.01
CASC4-203ENST00000429162 SRSF2Q01130 221 aaKnown RBP15.13■□□□□ 0.01
CASC4-203ENST00000429162 SIGLECL1Q8N7X8 197 aa15.13■□□□□ 0.01
CASC4-203ENST00000429162 GATD1Q8NB37 220 aa15.13■□□□□ 0.01
CASC4-203ENST00000429162 TMEM78Q5T7P6 136 aa15.12■□□□□ 0.01
CASC4-203ENST00000429162 CELSR1Q9NYQ6 3014 aa15.11■□□□□ 0.01
CASC4-203ENST00000429162 TMSB15BA0A087X1C1 80 aa15.11■□□□□ 0.01
CASC4-203ENST00000429162 IGHV7-4-1A0A0J9YVY3 117 aa15.11■□□□□ 0.01
CASC4-203ENST00000429162 GPX1P07203 203 aa15.11■□□□□ 0.01
CASC4-203ENST00000429162 AMTP48728 403 aa15.11■□□□□ 0.01
CASC4-203ENST00000429162 ZNF80P51504 273 aaPredicted RBP15.11■□□□□ 0.01
CASC4-203ENST00000429162 ZNF138P52744 262 aa15.11■□□□□ 0.01
CASC4-203ENST00000429162 TPPP3Q9BW30 176 aa15.11■□□□□ 0.01
CASC4-203ENST00000429162 DAZ1Q9NQZ3 744 aaKnown RBP15.11■□□□□ 0.01
CASC4-203ENST00000429162 PRRC2AP48634 2157 aaKnown RBP15.11■□□□□ 0.01
CASC4-203ENST00000429162 LOC102724200A0A096LPH7 203 aaPredicted RBP15.1■□□□□ 0.01
CASC4-203ENST00000429162 ZNF324O75467 553 aaPredicted RBP15.1■□□□□ 0.01
CASC4-203ENST00000429162 Q6ZWC4 215 aa15.1■□□□□ 0.01
CASC4-203ENST00000429162 ZFHX3Q15911 3703 aa15.1■□□□□ 0.01
CASC4-203ENST00000429162 FABP5P3A8MUU1 101 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 HOXA3O43365 443 aaPredicted RBP15.09■□□□□ 0.01
CASC4-203ENST00000429162 SCGB1D1O95968 90 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 PLA2G2AP14555 144 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 PMCHP20382 165 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 FAM106AQ4KMX7 169 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 C9orf47Q6ZRZ4 202 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 IL17RELQ6ZVW7 336 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 AGPAT4-IT1Q9H0P7 198 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 POLQO75417 2590 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 LINC00587B1AMM8 73 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 J3QKU1 62 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 K7EMT4 169 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 PKIAP61925 76 aa15.09■□□□□ 0.01
CASC4-203ENST00000429162 CSMD2Q7Z408 3487 aa15.08■□□□□ 0
CASC4-203ENST00000429162 LYZL1Q6UWQ5 148 aa15.08■□□□□ 0
CASC4-203ENST00000429162 ZNF738Q8NE65 137 aa15.08■□□□□ 0
CASC4-203ENST00000429162 ZNF702PQ9H963 129 aa15.08■□□□□ 0
CASC4-203ENST00000429162 PPP1R14DQ9NXH3 145 aa15.08■□□□□ 0
CASC4-203ENST00000429162 NAGKQ9UJ70 344 aa15.08■□□□□ 0
CASC4-203ENST00000429162 USP9YO00507 2555 aaPredicted RBP15.08■□□□□ 0
CASC4-203ENST00000429162 TSTD3H0UI37 97 aa15.07■□□□□ 0
CASC4-203ENST00000429162 SOCS3O14543 225 aa15.07■□□□□ 0
CASC4-203ENST00000429162 CTRLP40313 264 aa15.07■□□□□ 0
CASC4-203ENST00000429162 GPHB5Q86YW7 130 aa15.07■□□□□ 0
CASC4-203ENST00000429162 TEX29Q8N6K0 151 aa15.07■□□□□ 0
CASC4-203ENST00000429162 RHPN1-AS1Q9BWJ2 59 aa15.07■□□□□ 0
CASC4-203ENST00000429162 NRN1Q9NPD7 142 aa15.07■□□□□ 0
CASC4-203ENST00000429162 PTPN13Q12923 2485 aa15.07■□□□□ 0
CASC4-203ENST00000429162 FOXE3Q13461 319 aa15.07■□□□□ 0
CASC4-203ENST00000429162 FER1L6-AS1Q8NA97 138 aa15.07■□□□□ 0
CASC4-203ENST00000429162 UFC1Q9Y3C8 167 aa15.07■□□□□ 0
CASC4-203ENST00000429162 HSBP1O75506 76 aa15.06■□□□□ 0
CASC4-203ENST00000429162 ORM1P02763 201 aa15.06■□□□□ 0
CASC4-203ENST00000429162 ELANEP08246 267 aa15.06■□□□□ 0
CASC4-203ENST00000429162 HIST1H1AQ02539 215 aaPredicted RBP15.06■□□□□ 0
CASC4-203ENST00000429162 LINC01559Q495D7 138 aa15.06■□□□□ 0
CASC4-203ENST00000429162 TM4SF20Q53R12 229 aa15.06■□□□□ 0
CASC4-203ENST00000429162 PRR31Q5SQ13 230 aa15.06■□□□□ 0
CASC4-203ENST00000429162 ZNF493Q6ZR52 646 aa15.06■□□□□ 0
CASC4-203ENST00000429162 SMPXQ9UHP9 88 aa15.06■□□□□ 0
CASC4-203ENST00000429162 NAV2Q8IVL1 2488 aa15.06■□□□□ 0
CASC4-203ENST00000429162 OVOL1O14753 267 aa15.05■□□□□ 0
CASC4-203ENST00000429162 IGLC6P0CF74 106 aa15.05■□□□□ 0
CASC4-203ENST00000429162 RNASEKQ6P5S7 137 aaKnown RBP15.05■□□□□ 0
CASC4-203ENST00000429162 C10orf99Q6UWK7 81 aa15.05■□□□□ 0
CASC4-203ENST00000429162 C20orf173Q96LM9 149 aa15.05■□□□□ 0
CASC4-203ENST00000429162 LENEPQ9Y5L5 61 aa15.05■□□□□ 0
CASC4-203ENST00000429162 CENPEQ02224 2701 aa15.05■□□□□ -0
CASC4-203ENST00000429162 RPL11P62913 178 aaKnown RBP15.05■□□□□ -0
CASC4-203ENST00000429162 MAP1AP78559 2803 aaPredicted RBP15.05■□□□□ -0
CASC4-203ENST00000429162 RPLP1P05386 114 aaKnown RBP15.04■□□□□ -0
CASC4-203ENST00000429162 NTF3P20783 257 aa15.04■□□□□ -0
CASC4-203ENST00000429162 SAMD13Q5VXD3 122 aa15.04■□□□□ -0
CASC4-203ENST00000429162 OR10J6PQ8NGY7 276 aa15.04■□□□□ -0
CASC4-203ENST00000429162 MYOZ3Q8TDC0 251 aa15.04■□□□□ -0
CASC4-203ENST00000429162 PSMG3-AS1Q96PY0 264 aa15.04■□□□□ -0
CASC4-203ENST00000429162 CSPG4Q6UVK1 2322 aa15.03■□□□□ -0
CASC4-203ENST00000429162 LGALS1P09382 135 aaKnown RBP15.03■□□□□ -0
CASC4-203ENST00000429162 ZNF705DP0CH99 300 aaPredicted RBP15.03■□□□□ -0
CASC4-203ENST00000429162 ZNF705BP0CI00 300 aaPredicted RBP15.03■□□□□ -0
CASC4-203ENST00000429162 CHCHD1Q96BP2 118 aaKnown RBP15.03■□□□□ -0
CASC4-203ENST00000429162 DMRTA1Q5VZB9 504 aa15.02■□□□□ -0
CASC4-203ENST00000429162 NIT1Q86X76 327 aa15.02■□□□□ -0
CASC4-203ENST00000429162 FAM19A2Q8N3H0 131 aa15.02■□□□□ -0
CASC4-203ENST00000429162 WFDC11Q8NEX6 87 aa15.02■□□□□ -0
CASC4-203ENST00000429162 LINC00477Q96M19 166 aa15.02■□□□□ -0
CASC4-203ENST00000429162 PRO1933Q9H354 126 aa15.02■□□□□ -0
CASC4-203ENST00000429162 KRTDAPP60985 99 aa15.02□□□□□ -0.01
CASC4-203ENST00000429162 TMEM213A2RRL7 107 aa15.01□□□□□ -0.01
CASC4-203ENST00000429162 M0R2Z0 102 aa15.01□□□□□ -0.01
CASC4-203ENST00000429162 CD33P20138 364 aa15.01□□□□□ -0.01
CASC4-203ENST00000429162 RNF152Q8N8N0 203 aa15.01□□□□□ -0.01
CASC4-203ENST00000429162 ABCA12Q86UK0 2595 aa15.01□□□□□ -0.01
CASC4-203ENST00000429162 HIST2H2BCQ6DN03 193 aa15□□□□□ -0.01
CASC4-203ENST00000429162 Q8N2B8 174 aa15□□□□□ -0.01
CASC4-203ENST00000429162 ZNF664Q8N3J9 261 aa15□□□□□ -0.01
CASC4-203ENST00000429162 URB1-AS1Q96HZ7 61 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms