RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 LRRC37A5PQ49AS3 106 aa11.86□□□□□ -0.51
TRIM39-209ENST00000428728 CHAC2Q8WUX2 184 aa11.86□□□□□ -0.51
TRIM39-209ENST00000428728 SLC25A2Q9BXI2 301 aa11.86□□□□□ -0.51
TRIM39-209ENST00000428728 AAMDCQ9H7C9 122 aa11.86□□□□□ -0.51
TRIM39-209ENST00000428728 PRELID1Q9Y255 219 aa11.86□□□□□ -0.51
TRIM39-209ENST00000428728 DNAH11Q96DT5 4516 aa11.86□□□□□ -0.51
TRIM39-209ENST00000428728 DYNC1H1Q14204 4646 aaKnown RBP11.85□□□□□ -0.51
TRIM39-209ENST00000428728 DAZ2Q13117 558 aaKnown RBP11.85□□□□□ -0.51
TRIM39-209ENST00000428728 PDE6HQ13956 83 aa11.85□□□□□ -0.51
TRIM39-209ENST00000428728 ICAM4Q14773 271 aa11.85□□□□□ -0.51
TRIM39-209ENST00000428728 ZNF680Q8NEM1 530 aa11.85□□□□□ -0.51
TRIM39-209ENST00000428728 OR5C1Q8NGR4 320 aa11.85□□□□□ -0.51
TRIM39-209ENST00000428728 ENKURQ8TC29 256 aa11.85□□□□□ -0.51
TRIM39-209ENST00000428728 ZNF503Q96F45 646 aa11.85□□□□□ -0.51
TRIM39-209ENST00000428728 KRTAP1-5Q9BYS1 174 aa11.85□□□□□ -0.51
TRIM39-209ENST00000428728 AGPAT4-IT1Q9H0P7 198 aa11.85□□□□□ -0.51
TRIM39-209ENST00000428728 Q9H8V8 135 aa11.85□□□□□ -0.51
TRIM39-209ENST00000428728 TRGV2A0A075B6R0 118 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 TRGV1A0A0A0MS02 117 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 KLLNB2CW77 178 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 RNASE4P34096 147 aaKnown RBP11.84□□□□□ -0.51
TRIM39-209ENST00000428728 ASAH1Q13510 395 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 TTC32Q5I0X7 151 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 FAM122CQ6P4D5 195 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 MIR17HGQ75NE6 70 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 C11orf72Q8NBR9 251 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 LINC00477Q96M19 166 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 OR5AC2Q9NZP5 309 aa11.84□□□□□ -0.51
TRIM39-209ENST00000428728 GPX1P07203 203 aa11.83□□□□□ -0.52
TRIM39-209ENST00000428728 ESRGQ1W209 222 aa11.83□□□□□ -0.52
TRIM39-209ENST00000428728 PRR9Q5T870 116 aa11.83□□□□□ -0.52
TRIM39-209ENST00000428728 EIF4E3Q8N5X7 224 aaKnown RBP11.83□□□□□ -0.52
TRIM39-209ENST00000428728 FAM167A-AS1Q96KT0 104 aa11.83□□□□□ -0.52
TRIM39-209ENST00000428728 FAM19A4Q96LR4 140 aa11.83□□□□□ -0.52
TRIM39-209ENST00000428728 VGLL1Q99990 258 aa11.83□□□□□ -0.52
TRIM39-209ENST00000428728 E5RGE8 158 aa11.82□□□□□ -0.52
TRIM39-209ENST00000428728 ZNF324O75467 553 aaPredicted RBP11.82□□□□□ -0.52
TRIM39-209ENST00000428728 TMEM78Q5T7P6 136 aa11.82□□□□□ -0.52
TRIM39-209ENST00000428728 C9orf47Q6ZRZ4 202 aa11.82□□□□□ -0.52
TRIM39-209ENST00000428728 S100ZQ8WXG8 99 aa11.82□□□□□ -0.52
TRIM39-209ENST00000428728 SLC25A31Q9H0C2 315 aa11.82□□□□□ -0.52
TRIM39-209ENST00000428728 FUT9Q9Y231 359 aa11.82□□□□□ -0.52
TRIM39-209ENST00000428728 MRPS16Q9Y3D3 137 aaKnown RBP11.82□□□□□ -0.52
TRIM39-209ENST00000428728 KLF12Q9Y4X4 402 aa11.82□□□□□ -0.52
TRIM39-209ENST00000428728 PCLOQ9Y6V0 5065 aa11.82□□□□□ -0.52
TRIM39-209ENST00000428728 H3BNG1 76 aa11.81□□□□□ -0.52
TRIM39-209ENST00000428728 OR10J4P0C629 311 aa11.81□□□□□ -0.52
TRIM39-209ENST00000428728 CRISP2P16562 243 aa11.81□□□□□ -0.52
TRIM39-209ENST00000428728 ZFAND2AQ8N6M9 145 aa11.81□□□□□ -0.52
TRIM39-209ENST00000428728 Q8TAT8 98 aa11.81□□□□□ -0.52
TRIM39-209ENST00000428728 VSIG2Q96IQ7 327 aa11.81□□□□□ -0.52
TRIM39-209ENST00000428728 UPK3BQ9BT76 320 aa11.81□□□□□ -0.52
TRIM39-209ENST00000428728 OR51M1Q9H341 326 aa11.81□□□□□ -0.52
TRIM39-209ENST00000428728 Q9H3A6 140 aa11.81□□□□□ -0.52
TRIM39-209ENST00000428728 H0YIZ8 118 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 RGS13O14921 159 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 NBEAP1P0C6P0 100 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 TCL1AP56279 114 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 ANXA2RQ3ZCQ2 193 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 Q6ZQT7 251 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 PHYHIPLQ96FC7 376 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 LINC00467Q9BRT7 94 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 PAXXQ9BUH6 204 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 MRPL32Q9BYC8 188 aaKnown RBP11.8□□□□□ -0.52
TRIM39-209ENST00000428728 KRTAP4-5Q9BYR2 181 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 NMES1Q9C002 83 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 WDR61Q9GZS3 305 aaKnown RBP11.8□□□□□ -0.52
TRIM39-209ENST00000428728 KCNIP2Q9NS61 270 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 TP53TG3Q9ULZ0 132 aa11.8□□□□□ -0.52
TRIM39-209ENST00000428728 A0A096LPF7 62 aa11.79□□□□□ -0.52
TRIM39-209ENST00000428728 OR7C2O60412 319 aa11.79□□□□□ -0.52
TRIM39-209ENST00000428728 UPK1BO75841 260 aa11.79□□□□□ -0.52
TRIM39-209ENST00000428728 IGHV3-53P01767 116 aa11.79□□□□□ -0.52
TRIM39-209ENST00000428728 LINC00299Q6ZSB3 139 aa11.79□□□□□ -0.52
TRIM39-209ENST00000428728 ARPC5LQ9BPX5 153 aa11.79□□□□□ -0.52
TRIM39-209ENST00000428728 MRPL16Q9NX20 251 aaKnown RBP11.79□□□□□ -0.52
TRIM39-209ENST00000428728 SPINK4O60575 86 aa11.78□□□□□ -0.52
TRIM39-209ENST00000428728 IBA57Q5T440 356 aaKnown RBP11.78□□□□□ -0.52
TRIM39-209ENST00000428728 SPATA12Q7Z6I5 190 aa11.78□□□□□ -0.52
TRIM39-209ENST00000428728 FXYD5Q96DB9 178 aa11.78□□□□□ -0.52
TRIM39-209ENST00000428728 C18orf15Q96N68 181 aa11.78□□□□□ -0.52
TRIM39-209ENST00000428728 ZNF492Q9P255 531 aa11.78□□□□□ -0.52
TRIM39-209ENST00000428728 IGHV1OR15-1A0A075B7D0 117 aa11.77□□□□□ -0.53
TRIM39-209ENST00000428728 C17orf112F2Z3M2 114 aa11.77□□□□□ -0.53
TRIM39-209ENST00000428728 ZNF138P52744 262 aa11.77□□□□□ -0.53
TRIM39-209ENST00000428728 INMT-MINDY4F8WBC2 141 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 PAX4O43316 350 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 PRAF2O60831 178 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 NMBP08949 121 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 UBE2L3P68036 154 aaKnown RBP11.76□□□□□ -0.53
TRIM39-209ENST00000428728 CYCSP99999 105 aaKnown RBP11.76□□□□□ -0.53
TRIM39-209ENST00000428728 ZNF415Q09FC8 603 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 FFAR4Q5NUL3 377 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 PPP1R1CQ8WVI7 109 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 ST6GAL2Q96JF0 529 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 ATP5SQ99766 215 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 ICOSQ9Y6W8 199 aa11.76□□□□□ -0.53
TRIM39-209ENST00000428728 A0A1W2PPQ1 181 aa11.75□□□□□ -0.53
TRIM39-209ENST00000428728 CDK2AP2O75956 126 aa11.75□□□□□ -0.53
TRIM39-209ENST00000428728 CSN1S1P47710 185 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms