RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 GOLT1AQ6ZVE7 132 aa10.59□□□□□ -0.71
SGCE-204ENST00000428696 LINC00477Q96M19 166 aa10.59□□□□□ -0.71
SGCE-204ENST00000428696 TENM3Q9P273 2699 aa10.59□□□□□ -0.71
SGCE-204ENST00000428696 DIRC3C9JPN6 131 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 INSP01308 110 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 LEPP41159 167 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 CDKN1BP46527 198 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 EMP1P54849 157 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 CSNK1G2-AS1Q8NCQ2 148 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 IGF2BP2-AS1Q96M15 143 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 WWC2-AS2Q96NR7 200 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 LINC01587Q99440 93 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 RNASE4P34096 147 aaKnown RBP10.58□□□□□ -0.72
SGCE-204ENST00000428696 RAB5CP51148 216 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 ALKAL2Q6UX46 152 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 Q8TAT8 98 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 SGK494Q96LW2 274 aa10.58□□□□□ -0.72
SGCE-204ENST00000428696 YTHDF2Q9Y5A9 579 aaKnown RBP10.58□□□□□ -0.72
SGCE-204ENST00000428696 A8MTW9 85 aa10.57□□□□□ -0.72
SGCE-204ENST00000428696 ZNF705EA8MWA4 302 aaPredicted RBP10.57□□□□□ -0.72
SGCE-204ENST00000428696 GPX1P07203 203 aa10.57□□□□□ -0.72
SGCE-204ENST00000428696 ZNF138P52744 262 aa10.57□□□□□ -0.72
SGCE-204ENST00000428696 C1orf158Q8N1D5 194 aa10.57□□□□□ -0.72
SGCE-204ENST00000428696 SUN5Q8TC36 379 aa10.57□□□□□ -0.72
SGCE-204ENST00000428696 MBD3L1Q8WWY6 194 aa10.57□□□□□ -0.72
SGCE-204ENST00000428696 TRAV12-3A0A0B4J271 114 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 IGHV4-28A0A0C4DH34 117 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 A0A1W2PRE2 83 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 ZNF705GA8MUZ8 300 aaPredicted RBP10.56□□□□□ -0.72
SGCE-204ENST00000428696 GGTLC3B5MD39 225 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 TEX46H3BTG2 121 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 K7EQM0 130 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 PAGE4O60829 102 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 HBE1P02100 147 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 PRM2P04554 102 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 SULT1A2P50226 295 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 C9orf47Q6ZRZ4 202 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 C5orf17Q8NAS9 161 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 EPDR1Q9UM22 224 aa10.56□□□□□ -0.72
SGCE-204ENST00000428696 TRAV8-1A0A0A6YYK1 113 aa10.55□□□□□ -0.72
SGCE-204ENST00000428696 CRXO43186 299 aaPredicted RBP10.55□□□□□ -0.72
SGCE-204ENST00000428696 MIFP14174 115 aa10.55□□□□□ -0.72
SGCE-204ENST00000428696 GFI1BQ5VTD9 330 aa10.55□□□□□ -0.72
SGCE-204ENST00000428696 GNG13Q9P2W3 67 aa10.55□□□□□ -0.72
SGCE-204ENST00000428696 X6R8D5 127 aa10.55□□□□□ -0.72
SGCE-204ENST00000428696 STAB2Q8WWQ8 2551 aa10.55□□□□□ -0.72
SGCE-204ENST00000428696 RBAKDNA6NC62 111 aa10.54□□□□□ -0.72
SGCE-204ENST00000428696 FAM74A7A6NL05 159 aa10.54□□□□□ -0.72
SGCE-204ENST00000428696 TCRAP04437 139 aa10.54□□□□□ -0.72
SGCE-204ENST00000428696 CCL20P78556 96 aa10.54□□□□□ -0.72
SGCE-204ENST00000428696 RRN3P1Q2M238 152 aa10.54□□□□□ -0.72
SGCE-204ENST00000428696 NIPSNAP3BQ9BS92 247 aa10.54□□□□□ -0.72
SGCE-204ENST00000428696 EDA2RQ9HAV5 297 aa10.54□□□□□ -0.72
SGCE-204ENST00000428696 ZNF492Q9P255 531 aa10.54□□□□□ -0.72
SGCE-204ENST00000428696 RBMY1A1P0DJD3 496 aaKnown RBP10.53□□□□□ -0.72
SGCE-204ENST00000428696 RBMY1CP0DJD4 496 aa10.53□□□□□ -0.72
SGCE-204ENST00000428696 BTN1A1Q13410 526 aa10.53□□□□□ -0.72
SGCE-204ENST00000428696 RBMY1FQ15415 496 aaKnown RBP10.53□□□□□ -0.72
SGCE-204ENST00000428696 ZNF705AQ6ZN79 300 aaPredicted RBP10.53□□□□□ -0.72
SGCE-204ENST00000428696 PRNTQ86SH4 94 aa10.53□□□□□ -0.72
SGCE-204ENST00000428696 ODF3Q96PU9 254 aa10.53□□□□□ -0.72
SGCE-204ENST00000428696 NKX6-2Q9C056 277 aaPredicted RBP10.53□□□□□ -0.72
SGCE-204ENST00000428696 TRAV34A0A0B4J273 112 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 LOC102723971A0A1B0GUV8 181 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 C7orf71A4D174 169 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 SMIM9A6NGZ8 99 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 F6UZH7 168 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 ATP5G3P48201 142 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 ZFAND6Q6FIF0 208 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 Q8NAQ8 132 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 LINC00479Q96M42 142 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 ATG101Q9BSB4 218 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 NDFIP1Q9BT67 221 aa10.52□□□□□ -0.73
SGCE-204ENST00000428696 CXorf65A6NEN9 183 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 PEX7O00628 323 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 PPT1P50897 306 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 PMS2P11Q13670 270 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 CCDC28AQ8IWP9 274 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 TMEM256Q8N2U0 113 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 CYB561D1Q8N8Q1 229 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 C11orf45Q8TAV5 145 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 MUC7Q8TAX7 377 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 TREM1Q9NP99 234 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 PSG8Q9UQ74 426 aa10.51□□□□□ -0.73
SGCE-204ENST00000428696 SERTM2A0A1B0GWG4 89 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 H7BYZ3 331 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 AZU1P20160 251 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 ARL6IP6Q8N6S5 226 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 IL17DQ8TAD2 202 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 FAM19A4Q96LR4 140 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 RGS13O14921 159 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 TAS2R60P59551 318 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 NANOS2P60321 138 aaKnown RBP10.5□□□□□ -0.73
SGCE-204ENST00000428696 FLI1Q01543 452 aaPredicted RBP10.5□□□□□ -0.73
SGCE-204ENST00000428696 ZNF767PQ75MW2 155 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 NEU1Q99519 415 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 NAGKQ9UJ70 344 aa10.5□□□□□ -0.73
SGCE-204ENST00000428696 TRAV1-1A0A0B4J248 108 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms