RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 WFDC1Q9HC57 220 aa6.7□□□□□ -1.34
TRIM39-208ENST00000428555 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
TRIM39-208ENST00000428555 OR10J4P0C629 311 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 PET100P0DJ07 73 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 P0DMU3 169 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 FAM231AP0DMU4 169 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 FAM231CP0DMU5 169 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 LEPP41159 167 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 PDE6HQ13956 83 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 ICAM4Q14773 271 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 FFAR4Q5NUL3 377 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 TMEM88Q6PEY1 159 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 ZNF493Q6ZR52 646 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 RNF141Q8WVD5 230 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 FXYD5Q96DB9 178 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 MRPL53Q96EL3 112 aaKnown RBP6.69□□□□□ -1.34
TRIM39-208ENST00000428555 LINC00477Q96M19 166 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 PAXXQ9BUH6 204 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 NOP10Q9NPE3 64 aaKnown RBP6.69□□□□□ -1.34
TRIM39-208ENST00000428555 FUT9Q9Y231 359 aa6.69□□□□□ -1.34
TRIM39-208ENST00000428555 TIMM8BQ9Y5J9 83 aaPredicted RBP6.69□□□□□ -1.34
TRIM39-208ENST00000428555 CBY3A6NI87 242 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 EREGO14944 169 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 EIF3GO75821 320 aaKnown RBP eCLIP6.68□□□□□ -1.34
TRIM39-208ENST00000428555 PTTG1O95997 202 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 RANP62826 216 aaKnown RBP6.68□□□□□ -1.34
TRIM39-208ENST00000428555 FAM122CQ6P4D5 195 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 CCDC28AQ8IWP9 274 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 RNASE8Q8TDE3 154 aaKnown RBP6.68□□□□□ -1.34
TRIM39-208ENST00000428555 ZNF503Q96F45 646 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 C16orf74Q96GX8 76 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 ODF3Q96PU9 254 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 VGLL1Q99990 258 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 C20orf144Q9BQM9 153 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 MRPL32Q9BYC8 188 aaKnown RBP6.68□□□□□ -1.34
TRIM39-208ENST00000428555 MED28Q9H204 178 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 AAMDCQ9H7C9 122 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 KCNIP2Q9NS61 270 aa6.68□□□□□ -1.34
TRIM39-208ENST00000428555 IGKV2-40A0A087WW87 121 aaPredicted RBP6.67□□□□□ -1.34
TRIM39-208ENST00000428555 F5H768 121 aa6.67□□□□□ -1.34
TRIM39-208ENST00000428555 M0R2N4 97 aa6.67□□□□□ -1.34
TRIM39-208ENST00000428555 OR7C2O60412 319 aa6.67□□□□□ -1.34
TRIM39-208ENST00000428555 ZNF324O75467 553 aaPredicted RBP6.67□□□□□ -1.34
TRIM39-208ENST00000428555 IGKV2D-40P01614 121 aaPredicted RBP6.67□□□□□ -1.34
TRIM39-208ENST00000428555 SLC25A5P05141 298 aaKnown RBP6.67□□□□□ -1.34
TRIM39-208ENST00000428555 RNASE4P34096 147 aaKnown RBP6.67□□□□□ -1.34
TRIM39-208ENST00000428555 CD300CQ08708 224 aa6.67□□□□□ -1.34
TRIM39-208ENST00000428555 Q5BKY6 102 aa6.67□□□□□ -1.34
TRIM39-208ENST00000428555 C9orf47Q6ZRZ4 202 aa6.67□□□□□ -1.34
TRIM39-208ENST00000428555 TMEM263Q8WUH6 116 aaKnown RBP6.67□□□□□ -1.34
TRIM39-208ENST00000428555 PHYHIPLQ96FC7 376 aa6.67□□□□□ -1.34
TRIM39-208ENST00000428555 FAM19A4Q96LR4 140 aa6.67□□□□□ -1.34
TRIM39-208ENST00000428555 C7orf71A4D174 169 aa6.66□□□□□ -1.34
TRIM39-208ENST00000428555 ATP5G1P05496 136 aa6.66□□□□□ -1.34
TRIM39-208ENST00000428555 GPX1P07203 203 aa6.66□□□□□ -1.34
TRIM39-208ENST00000428555 ATP5G3P48201 142 aa6.66□□□□□ -1.34
TRIM39-208ENST00000428555 BTN1A1Q13410 526 aa6.66□□□□□ -1.34
TRIM39-208ENST00000428555 TMEM78Q5T7P6 136 aa6.66□□□□□ -1.34
TRIM39-208ENST00000428555 PET117Q6UWS5 81 aa6.66□□□□□ -1.34
TRIM39-208ENST00000428555 FAT2Q9NYQ8 4349 aa6.66□□□□□ -1.34
TRIM39-208ENST00000428555 IGLV2-18A0A075B6J9 118 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 GAGE12BA1L429 117 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 SNURFLB1AK76 121 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 KLLNB2CW77 178 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 GAGE7O76087 117 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 GAGE12FP0CL80 117 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 GAGE12GP0CL81 117 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 GAGE12IP0CL82 117 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 UBE2L3P68036 154 aaKnown RBP6.65□□□□□ -1.34
TRIM39-208ENST00000428555 Q6ZQT7 251 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 UBE2DNLQ8IWF7 75 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 ZFAND2AQ8N6M9 145 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 PYGO2Q9BRQ0 406 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 Q9H3A6 140 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 ZNF492Q9P255 531 aa6.65□□□□□ -1.34
TRIM39-208ENST00000428555 A0A1W2PPV4 95 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 PGPA6NDG6 321 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 HMGB3O15347 200 aaKnown RBP6.64□□□□□ -1.35
TRIM39-208ENST00000428555 NUDT3O95989 172 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 NMBP08949 121 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 CRISP2P16562 243 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 M6PRP20645 277 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 CSN1S1P47710 185 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 ZNF138P52744 262 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 TAS2R45P59539 299 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 RAB2AP61019 212 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 OR5I1Q13606 314 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 ACOT6Q3I5F7 207 aaPredicted RBP6.64□□□□□ -1.35
TRIM39-208ENST00000428555 RNF212Q495C1 297 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 SMUG1Q53HV7 270 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 PRR9Q5T870 116 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 LYPD1Q8N2G4 141 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 LINC00612Q8N6U2 182 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 C15orf53Q8NAA6 179 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 OR10G4Q8NGN3 311 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 OR10G9Q8NGN4 311 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 OR10G7Q8NGN6 311 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 Q8TAT8 98 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 HYLS1Q96M11 299 aa6.64□□□□□ -1.35
TRIM39-208ENST00000428555 GSN-AS1Q9NRJ2 163 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms