RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 J3KRW8 73 aa11.88□□□□□ -0.51
VRK2-204ENST00000428021 SERF2P84101 59 aa11.88□□□□□ -0.51
VRK2-204ENST00000428021 NIPSNAP3BQ9BS92 247 aa11.88□□□□□ -0.51
VRK2-204ENST00000428021 APLNQ9ULZ1 77 aa11.88□□□□□ -0.51
VRK2-204ENST00000428021 TEX48A0A1B0GUV7 120 aa11.87□□□□□ -0.51
VRK2-204ENST00000428021 H7BYZ3 331 aa11.87□□□□□ -0.51
VRK2-204ENST00000428021 HMGB3O15347 200 aaKnown RBP11.87□□□□□ -0.51
VRK2-204ENST00000428021 LY6G6CO95867 125 aa11.87□□□□□ -0.51
VRK2-204ENST00000428021 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
VRK2-204ENST00000428021 TRAV12-3A0A0B4J271 114 aa11.86□□□□□ -0.51
VRK2-204ENST00000428021 KLLNB2CW77 178 aa11.86□□□□□ -0.51
VRK2-204ENST00000428021 ARPC5O15511 151 aa11.86□□□□□ -0.51
VRK2-204ENST00000428021 SLC25A5P05141 298 aaKnown RBP11.86□□□□□ -0.51
VRK2-204ENST00000428021 HTN1P15515 57 aa11.86□□□□□ -0.51
VRK2-204ENST00000428021 CRISP2P16562 243 aa11.86□□□□□ -0.51
VRK2-204ENST00000428021 CDC34P49427 236 aaPredicted RBP11.86□□□□□ -0.51
VRK2-204ENST00000428021 TCTAP57738 103 aa11.86□□□□□ -0.51
VRK2-204ENST00000428021 RNASE8Q8TDE3 154 aaKnown RBP11.86□□□□□ -0.51
VRK2-204ENST00000428021 RAB24Q969Q5 203 aa11.86□□□□□ -0.51
VRK2-204ENST00000428021 CYTL1Q9NRR1 136 aa11.86□□□□□ -0.51
VRK2-204ENST00000428021 ZNF492Q9P255 531 aa11.86□□□□□ -0.51
VRK2-204ENST00000428021 IGHV4-4A0A075B6R2 117 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 BORCS7-ASMTA0A0B4J1R7 106 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 MBP02144 154 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 STAG3L2P0CL84 134 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 STAG3L3P0CL85 134 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 ARL14EPLP0DKL9 152 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 CD300CQ08708 224 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 ZFAND2AQ8N6M9 145 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 OR11H4Q8NGC9 324 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 GNPNAT1Q96EK6 184 aaPredicted RBP11.85□□□□□ -0.51
VRK2-204ENST00000428021 OTORQ9NRC9 128 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 KMT2AQ03164 3969 aa11.85□□□□□ -0.51
VRK2-204ENST00000428021 C7orf71A4D174 169 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 RBAKDNA6NC62 111 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 LYRM9A8MSI8 78 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 DIRC3C9JPN6 131 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 TAAR5O14804 337 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 ZNF324O75467 553 aaPredicted RBP11.84□□□□□ -0.51
VRK2-204ENST00000428021 CSN1S1P47710 185 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 TMEM78Q5T7P6 136 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 PRR9Q5T870 116 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 LGALS9CQ6DKI2 356 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 ZNF493Q6ZR52 646 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 SUN5Q8TC36 379 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
VRK2-204ENST00000428021 C16orf74Q96GX8 76 aa11.84□□□□□ -0.51
VRK2-204ENST00000428021 PGPA6NDG6 321 aa11.83□□□□□ -0.52
VRK2-204ENST00000428021 NMBP08949 121 aa11.83□□□□□ -0.52
VRK2-204ENST00000428021 ZNF138P52744 262 aa11.83□□□□□ -0.52
VRK2-204ENST00000428021 DAD1P61803 113 aa11.83□□□□□ -0.52
VRK2-204ENST00000428021 BTN1A1Q13410 526 aa11.83□□□□□ -0.52
VRK2-204ENST00000428021 SSX7Q7RTT5 188 aa11.83□□□□□ -0.52
VRK2-204ENST00000428021 Q8TAT8 98 aa11.83□□□□□ -0.52
VRK2-204ENST00000428021 HYLS1Q96M11 299 aa11.83□□□□□ -0.52
VRK2-204ENST00000428021 GCHFRP30047 84 aa11.82□□□□□ -0.52
VRK2-204ENST00000428021 RNASE4P34096 147 aaKnown RBP11.82□□□□□ -0.52
VRK2-204ENST00000428021 ZNF726P1Q15940 193 aa11.82□□□□□ -0.52
VRK2-204ENST00000428021 Q6ZQT7 251 aa11.82□□□□□ -0.52
VRK2-204ENST00000428021 KCNRGQ8N5I3 272 aa11.82□□□□□ -0.52
VRK2-204ENST00000428021 RXFP4Q8TDU9 374 aa11.82□□□□□ -0.52
VRK2-204ENST00000428021 PYGO2Q9BRQ0 406 aa11.82□□□□□ -0.52
VRK2-204ENST00000428021 ACTR3CQ9C0K3 210 aaPredicted RBP11.82□□□□□ -0.52
VRK2-204ENST00000428021 TRBV7-9A0A0J9YWB2 115 aa11.81□□□□□ -0.52
VRK2-204ENST00000428021 HMSDA8MTL9 139 aa11.81□□□□□ -0.52
VRK2-204ENST00000428021 GPX1P07203 203 aa11.81□□□□□ -0.52
VRK2-204ENST00000428021 ARL6IP6Q8N6S5 226 aa11.81□□□□□ -0.52
VRK2-204ENST00000428021 NOP10Q9NPE3 64 aaKnown RBP11.81□□□□□ -0.52
VRK2-204ENST00000428021 TIMM8BQ9Y5J9 83 aaPredicted RBP11.81□□□□□ -0.52
VRK2-204ENST00000428021 DEFB130BP0DP73 79 aa11.8□□□□□ -0.52
VRK2-204ENST00000428021 DEFB130AP0DP74 79 aa11.8□□□□□ -0.52
VRK2-204ENST00000428021 HTN3P15516 51 aa11.8□□□□□ -0.52
VRK2-204ENST00000428021 ZNF345Q14585 488 aa11.8□□□□□ -0.52
VRK2-204ENST00000428021 CCDC28AQ8IWP9 274 aa11.8□□□□□ -0.52
VRK2-204ENST00000428021 LINC00467Q9BRT7 94 aa11.8□□□□□ -0.52
VRK2-204ENST00000428021 CXorf1O96002 111 aa11.79□□□□□ -0.52
VRK2-204ENST00000428021 GNG5P63218 68 aa11.79□□□□□ -0.52
VRK2-204ENST00000428021 FAM74A1Q5RGS3 127 aa11.79□□□□□ -0.52
VRK2-204ENST00000428021 LINC00612Q8N6U2 182 aa11.79□□□□□ -0.52
VRK2-204ENST00000428021 CMTM2Q8TAZ6 248 aa11.79□□□□□ -0.52
VRK2-204ENST00000428021 GOLT1AQ6ZVE7 132 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 C11orf72Q8NBR9 251 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 TMED6Q8WW62 240 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 ST6GAL2Q96JF0 529 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 FAM210BQ96KR6 192 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 ARPC5LQ9BPX5 153 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 NDUFAF3Q9BU61 184 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 RPH3ALQ9UNE2 315 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 LENEPQ9Y5L5 61 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
VRK2-204ENST00000428021 CTXND1A0A1B0GTU2 59 aa11.77□□□□□ -0.53
VRK2-204ENST00000428021 CBY3A6NI87 242 aa11.77□□□□□ -0.53
VRK2-204ENST00000428021 ANXA2RQ3ZCQ2 193 aa11.77□□□□□ -0.53
VRK2-204ENST00000428021 AKR1C8PQ5T2L2 129 aa11.77□□□□□ -0.53
VRK2-204ENST00000428021 Q6ZNX1 250 aa11.77□□□□□ -0.53
VRK2-204ENST00000428021 EIF4E3Q8N5X7 224 aaKnown RBP11.77□□□□□ -0.53
VRK2-204ENST00000428021 TMEM167BQ9NRX6 74 aa11.77□□□□□ -0.53
VRK2-204ENST00000428021 TRAV8-1A0A0A6YYK1 113 aa11.76□□□□□ -0.53
VRK2-204ENST00000428021 A0A0D9SG52 128 aa11.76□□□□□ -0.53
VRK2-204ENST00000428021 GGTLC3B5MD39 225 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms