RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ODF3L1Q8IXM7 274 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 C18orf15Q96N68 181 aa8.49□□□□□ -1.05
TCOF1-204ENST00000427724 A0A1W2PRE2 83 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 CCL24O00175 119 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 LINC00479Q96M42 142 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 ZNF138P52744 262 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 LMO4P61968 165 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 ASPHD1Q5U4P2 390 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 TMEM136Q6ZRR5 245 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 LOC107984156A0A0G2JMH3 177 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 ARL17AQ8IVW1 177 aa8.48□□□□□ -1.05
TCOF1-204ENST00000427724 ELANEP08246 267 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 RNASE4P34096 147 aaKnown RBP8.47□□□□□ -1.05
TCOF1-204ENST00000427724 TCTEX1D4Q5JR98 221 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 SIGMAR1Q99720 223 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 TWIST1Q15672 202 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 C17orf58Q2M2W7 97 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 SCGB1D4Q6XE38 83 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 DNAJC9-AS1A6NH13 148 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 FCN3O75636 299 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 DUSP14O95147 198 aaKnown RBP8.47□□□□□ -1.05
TCOF1-204ENST00000427724 ZNF134P52741 427 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 LRP4O75096 1905 aa8.47□□□□□ -1.05
TCOF1-204ENST00000427724 TRBV7-1A0A0A6YYK4 115 aa8.46□□□□□ -1.05
TCOF1-204ENST00000427724 ZNF56Q15929 161 aa8.46□□□□□ -1.05
TCOF1-204ENST00000427724 LSM4Q9Y4Z0 139 aaKnown RBP8.46□□□□□ -1.05
TCOF1-204ENST00000427724 TMEM238C9JI98 176 aa8.46□□□□□ -1.05
TCOF1-204ENST00000427724 UBE2L6O14933 153 aa8.46□□□□□ -1.05
TCOF1-204ENST00000427724 C11orf53Q8IXP5 236 aa8.46□□□□□ -1.05
TCOF1-204ENST00000427724 DAZ1Q9NQZ3 744 aaKnown RBP8.46□□□□□ -1.05
TCOF1-204ENST00000427724 M0R381 172 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 IGLV2-14P01704 120 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 DEFB130BP0DP73 79 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 DEFB130AP0DP74 79 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 Q1RN00 199 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 SIGLEC15Q6ZMC9 328 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 C18orf32Q8TCD1 76 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 TRGV4A0A0C4DH28 118 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
TCOF1-204ENST00000427724 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 C5orf30Q96GV9 206 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 ZNF414Q96IQ9 312 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 Q9H3A6 140 aa8.46□□□□□ -1.06
TCOF1-204ENST00000427724 A0A1B0GWB2 263 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 CKS2P33552 79 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 GPR82Q96P67 336 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 TRAV8-6A0A0B4J262 113 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 NDUFB8O95169 186 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 ZC2HC1AQ96GY0 325 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 NHP2Q9NX24 153 aaKnown RBP8.45□□□□□ -1.06
TCOF1-204ENST00000427724 DMXL1Q9Y485 3027 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 FAM223BA6NKX1 122 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 C15orf65H3BRN8 121 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 SYS1-DBNDD2H3BUS1 97 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 PAX2Q02962 417 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 ZNF415Q09FC8 603 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 SFTA2Q6UW10 78 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 FAM223AQ8IWN6 122 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 ZNF295-AS1Q8N0V1 137 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 HIST1H4GQ99525 98 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 XCL2Q9UBD3 114 aa8.45□□□□□ -1.06
TCOF1-204ENST00000427724 PLXNB1O43157 2135 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 FRMD6-AS1P0C7T7 363 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 ESDP10768 282 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 FER1L6-AS1Q8NA97 138 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 CD7P09564 240 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 SEC11AP67812 179 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 SLAQ13239 276 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 C2orf83Q53S99 150 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 RPP21Q9H633 154 aaKnown RBP8.44□□□□□ -1.06
TCOF1-204ENST00000427724 EPDR1Q9UM22 224 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 LOC400499M0QZD8 3231 aa8.44□□□□□ -1.06
TCOF1-204ENST00000427724 NUP35Q8NFH5 326 aa8.43□□□□□ -1.06
TCOF1-204ENST00000427724 PRSS47A8MTI9 375 aa8.43□□□□□ -1.06
TCOF1-204ENST00000427724 CACNG7P62955 275 aa8.43□□□□□ -1.06
TCOF1-204ENST00000427724 CITED2Q99967 270 aaPredicted RBP8.43□□□□□ -1.06
TCOF1-204ENST00000427724 C1QTNF4Q9BXJ3 329 aa8.43□□□□□ -1.06
TCOF1-204ENST00000427724 A0A1W2PPI3 338 aa8.43□□□□□ -1.06
TCOF1-204ENST00000427724 RNASE2P10153 161 aaKnown RBP8.43□□□□□ -1.06
TCOF1-204ENST00000427724 GUSBP1Q15486 140 aa8.43□□□□□ -1.06
TCOF1-204ENST00000427724 NPIPB6E9PJ23 425 aa8.43□□□□□ -1.06
TCOF1-204ENST00000427724 TPSG1Q9NRR2 321 aa8.43□□□□□ -1.06
TCOF1-204ENST00000427724 MRPL27Q9P0M9 148 aaKnown RBP8.43□□□□□ -1.06
TCOF1-204ENST00000427724 RBX1P62877 108 aa8.42□□□□□ -1.06
TCOF1-204ENST00000427724 SLC25A39Q9BZJ4 359 aaPredicted RBP8.42□□□□□ -1.06
TCOF1-204ENST00000427724 TMEM14BQ9NUH8 114 aa8.42□□□□□ -1.06
TCOF1-204ENST00000427724 IGLC7A0M8Q6 106 aa8.42□□□□□ -1.06
TCOF1-204ENST00000427724 KIR3DS1Q14943 382 aa8.42□□□□□ -1.06
TCOF1-204ENST00000427724 CSTL1Q9H114 145 aa8.42□□□□□ -1.06
TCOF1-204ENST00000427724 K7EP13 123 aa8.42□□□□□ -1.06
TCOF1-204ENST00000427724 SAMD5Q5TGI4 173 aa8.42□□□□□ -1.06
TCOF1-204ENST00000427724 CIARTQ8N365 385 aaPredicted RBP8.42□□□□□ -1.06
TCOF1-204ENST00000427724 V9GYV3 84 aa8.42□□□□□ -1.06
TCOF1-204ENST00000427724 BAHCC1Q9P281 2608 aa8.42□□□□□ -1.06
TCOF1-204ENST00000427724 A0A1B0GUT8 65 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 PMS2P5A8MQ11 134 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 GGTLC3B5MD39 225 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms