RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 LGALSLQ3ZCW2 172 aaPredicted RBP18.12■□□□□ 0.49
HERPUD2-205ENST00000427455 TMEM256Q8N2U0 113 aa18.12■□□□□ 0.49
HERPUD2-205ENST00000427455 C11orf45Q8TAV5 145 aa18.12■□□□□ 0.49
HERPUD2-205ENST00000427455 CMTM2Q8TAZ6 248 aa18.12■□□□□ 0.49
HERPUD2-205ENST00000427455 TMEM189A5PLL7 270 aa18.11■□□□□ 0.49
HERPUD2-205ENST00000427455 SLC25A5P05141 298 aaKnown RBP18.11■□□□□ 0.49
HERPUD2-205ENST00000427455 RRN3P1Q2M238 152 aa18.11■□□□□ 0.49
HERPUD2-205ENST00000427455 GFI1BQ5VTD9 330 aa18.11■□□□□ 0.49
HERPUD2-205ENST00000427455 IQCF2Q8IXL9 164 aa18.11■□□□□ 0.49
HERPUD2-205ENST00000427455 ARL6IP6Q8N6S5 226 aa18.11■□□□□ 0.49
HERPUD2-205ENST00000427455 STOML3Q8TAV4 291 aa18.11■□□□□ 0.49
HERPUD2-205ENST00000427455 VGLL1Q99990 258 aa18.11■□□□□ 0.49
HERPUD2-205ENST00000427455 C20orf144Q9BQM9 153 aa18.11■□□□□ 0.49
HERPUD2-205ENST00000427455 CXorf65A6NEN9 183 aa18.1■□□□□ 0.49
HERPUD2-205ENST00000427455 UMAD1C9J7I0 102 aa18.1■□□□□ 0.49
HERPUD2-205ENST00000427455 DIRC3C9JPN6 131 aa18.1■□□□□ 0.49
HERPUD2-205ENST00000427455 PMS2P11Q13670 270 aa18.1■□□□□ 0.49
HERPUD2-205ENST00000427455 KIR3DS1Q14943 382 aa18.1■□□□□ 0.49
HERPUD2-205ENST00000427455 FAM19A4Q96LR4 140 aa18.1■□□□□ 0.49
HERPUD2-205ENST00000427455 CD300CQ08708 224 aa18.09■□□□□ 0.49
HERPUD2-205ENST00000427455 LOC102723971A0A1B0GUV8 181 aa18.08■□□□□ 0.48
HERPUD2-205ENST00000427455 MAP1LC3B2A6NCE7 125 aa18.08■□□□□ 0.48
HERPUD2-205ENST00000427455 ZNF138P52744 262 aa18.08■□□□□ 0.48
HERPUD2-205ENST00000427455 NANOS2P60321 138 aaKnown RBP18.08■□□□□ 0.48
HERPUD2-205ENST00000427455 MAP1LC3BQ9GZQ8 125 aa18.08■□□□□ 0.48
HERPUD2-205ENST00000427455 ZNF492Q9P255 531 aa18.08■□□□□ 0.48
HERPUD2-205ENST00000427455 KLLNB2CW77 178 aa18.07■□□□□ 0.48
HERPUD2-205ENST00000427455 H7BYZ3 331 aa18.07■□□□□ 0.48
HERPUD2-205ENST00000427455 J3KRW8 73 aa18.07■□□□□ 0.48
HERPUD2-205ENST00000427455 CRISP2P16562 243 aa18.07■□□□□ 0.48
HERPUD2-205ENST00000427455 ZFP69Q49AA0 526 aa18.07■□□□□ 0.48
HERPUD2-205ENST00000427455 TMED6Q8WW62 240 aa18.07■□□□□ 0.48
HERPUD2-205ENST00000427455 LINC01587Q99440 93 aa18.07■□□□□ 0.48
HERPUD2-205ENST00000427455 PLA2G2EQ9NZK7 142 aa18.07■□□□□ 0.48
HERPUD2-205ENST00000427455 RPH3ALQ9UNE2 315 aa18.07■□□□□ 0.48
HERPUD2-205ENST00000427455 TRBV7-9A0A0J9YWB2 115 aa18.06■□□□□ 0.48
HERPUD2-205ENST00000427455 NMBP08949 121 aa18.06■□□□□ 0.48
HERPUD2-205ENST00000427455 FHITP49789 147 aa18.06■□□□□ 0.48
HERPUD2-205ENST00000427455 FGF8P55075 233 aaPredicted RBP18.06■□□□□ 0.48
HERPUD2-205ENST00000427455 TAS2R60P59551 318 aa18.06■□□□□ 0.48
HERPUD2-205ENST00000427455 C5orf17Q8NAS9 161 aa18.06■□□□□ 0.48
HERPUD2-205ENST00000427455 Q8TAT8 98 aa18.06■□□□□ 0.48
HERPUD2-205ENST00000427455 NUPR2A6NF83 97 aa18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 ZNF705GA8MUZ8 300 aaPredicted RBP18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 GGTLC3B5MD39 225 aa18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 EMP1P54849 157 aa18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 DPPA3Q6W0C5 159 aa18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 GOLT1AQ6ZVE7 132 aa18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 FAM213BQ8TBF2 198 aa18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 TMPRSS5Q9H3S3 457 aa18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 CELA1Q9UNI1 258 aa18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 TENM2Q9NT68 2774 aa18.05■□□□□ 0.48
HERPUD2-205ENST00000427455 TRAV12-3A0A0B4J271 114 aa18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 A0A1W2PRE2 83 aa18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 C7orf71A4D174 169 aa18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 GNG5P63218 68 aa18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 EIF5AL1Q6IS14 154 aaKnown RBP18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 C9orf62Q8N4C0 152 aa18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 ZFAND2AQ8N6M9 145 aa18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 NIPSNAP3BQ9BS92 247 aa18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 DYNC2H1Q8NCM8 4307 aaKnown RBP18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 KMT2CQ8NEZ4 4911 aaKnown RBP18.04■□□□□ 0.48
HERPUD2-205ENST00000427455 TEX48A0A1B0GUV7 120 aa18.03■□□□□ 0.48
HERPUD2-205ENST00000427455 SERTM2A0A1B0GWG4 89 aa18.03■□□□□ 0.48
HERPUD2-205ENST00000427455 GPX1P07203 203 aa18.03■□□□□ 0.48
HERPUD2-205ENST00000427455 SLC51BQ86UW2 128 aa18.03■□□□□ 0.48
HERPUD2-205ENST00000427455 YTHDF2Q9Y5A9 579 aaKnown RBP18.03■□□□□ 0.48
HERPUD2-205ENST00000427455 LENEPQ9Y5L5 61 aa18.03■□□□□ 0.48
HERPUD2-205ENST00000427455 SPART-AS1P0CW21 52 aa18.02■□□□□ 0.48
HERPUD2-205ENST00000427455 SUMO1P63165 101 aaKnown RBP18.02■□□□□ 0.48
HERPUD2-205ENST00000427455 BTN1A1Q13410 526 aa18.02■□□□□ 0.48
HERPUD2-205ENST00000427455 PHLDA1Q8WV24 401 aaPredicted RBP18.02■□□□□ 0.48
HERPUD2-205ENST00000427455 TCRAP04437 139 aa18.01■□□□□ 0.47
HERPUD2-205ENST00000427455 PRM2P04554 102 aa18.01■□□□□ 0.47
HERPUD2-205ENST00000427455 RNASE4P34096 147 aaKnown RBP18.01■□□□□ 0.47
HERPUD2-205ENST00000427455 CEMP1Q6PRD7 247 aaPredicted RBP18.01■□□□□ 0.47
HERPUD2-205ENST00000427455 MBD3L1Q8WWY6 194 aa18.01■□□□□ 0.47
HERPUD2-205ENST00000427455 DKK2Q9UBU2 259 aa18.01■□□□□ 0.47
HERPUD2-205ENST00000427455 HTN1P15515 57 aa18■□□□□ 0.47
HERPUD2-205ENST00000427455 UBE2G2P60604 165 aa18■□□□□ 0.47
HERPUD2-205ENST00000427455 PRR9Q5T870 116 aa18■□□□□ 0.47
HERPUD2-205ENST00000427455 SFT2D1Q8WV19 159 aa18■□□□□ 0.47
HERPUD2-205ENST00000427455 C16orf74Q96GX8 76 aa18■□□□□ 0.47
HERPUD2-205ENST00000427455 PYGO2Q9BRQ0 406 aa18■□□□□ 0.47
HERPUD2-205ENST00000427455 NKX6-2Q9C056 277 aaPredicted RBP18■□□□□ 0.47
HERPUD2-205ENST00000427455 FAM74A7A6NL05 159 aa17.99■□□□□ 0.47
HERPUD2-205ENST00000427455 K7EQM0 130 aa17.99■□□□□ 0.47
HERPUD2-205ENST00000427455 AZU1P20160 251 aa17.99■□□□□ 0.47
HERPUD2-205ENST00000427455 RAB5CP51148 216 aa17.99■□□□□ 0.47
HERPUD2-205ENST00000427455 FAM222AQ5U5X8 452 aa17.99■□□□□ 0.47
HERPUD2-205ENST00000427455 ZNF493Q6ZR52 646 aa17.99■□□□□ 0.47
HERPUD2-205ENST00000427455 Q6ZTC4 211 aa17.99■□□□□ 0.47
HERPUD2-205ENST00000427455 TMEM263Q8WUH6 116 aaKnown RBP17.99■□□□□ 0.47
HERPUD2-205ENST00000427455 EPDR1Q9UM22 224 aa17.99■□□□□ 0.47
HERPUD2-205ENST00000427455 PLECQ15149 4684 aaKnown RBP17.98■□□□□ 0.47
HERPUD2-205ENST00000427455 TRAV8-1A0A0A6YYK1 113 aa17.98■□□□□ 0.47
HERPUD2-205ENST00000427455 C11orf94C9JXX5 98 aa17.98■□□□□ 0.47
HERPUD2-205ENST00000427455 ZNF324O75467 553 aaPredicted RBP17.98■□□□□ 0.47
HERPUD2-205ENST00000427455 C12orf74Q32Q52 190 aa17.98■□□□□ 0.47
HERPUD2-205ENST00000427455 RNASE8Q8TDE3 154 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms