RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 CRXO43186 299 aaPredicted RBP14.78□□□□□ -0.04
SNX17-202ENST00000427123 FAM104BQ5XKR9 115 aa14.78□□□□□ -0.04
SNX17-202ENST00000427123 ATOH7Q8N100 152 aa14.78□□□□□ -0.04
SNX17-202ENST00000427123 HIF1ANQ9NWT6 349 aa14.78□□□□□ -0.04
SNX17-202ENST00000427123 UQCR10Q9UDW1 63 aa14.78□□□□□ -0.04
SNX17-202ENST00000427123 U3KQK5 164 aa14.78□□□□□ -0.04
SNX17-202ENST00000427123 CSMD1Q96PZ7 3565 aa14.78□□□□□ -0.04
SNX17-202ENST00000427123 C20orf202A1L168 122 aa14.78□□□□□ -0.04
SNX17-202ENST00000427123 PPIFP30405 207 aaKnown RBP14.78□□□□□ -0.04
SNX17-202ENST00000427123 ZNF138P52744 262 aa14.78□□□□□ -0.04
SNX17-202ENST00000427123 USMG5Q96IX5 58 aa14.78□□□□□ -0.04
SNX17-202ENST00000427123 ASH1LQ9NR48 2969 aaKnown RBP14.78□□□□□ -0.04
SNX17-202ENST00000427123 TRAV9-2A0A087WT02 112 aa14.77□□□□□ -0.04
SNX17-202ENST00000427123 CSN3P07498 182 aa14.77□□□□□ -0.04
SNX17-202ENST00000427123 IGLC3P0DOY3 106 aa14.77□□□□□ -0.04
SNX17-202ENST00000427123 LINC01559Q495D7 138 aa14.77□□□□□ -0.04
SNX17-202ENST00000427123 IL17RELQ6ZVW7 336 aa14.77□□□□□ -0.04
SNX17-202ENST00000427123 SYS1-DBNDD2H3BUS1 97 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 NDUFA4O00483 81 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 ORM1P02763 201 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 SPATA12Q7Z6I5 190 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 GLMPQ8WWB7 406 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 AP5S1Q9NUS5 200 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 GATA3P23771 443 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 NUTF2P61970 127 aaKnown RBP14.76□□□□□ -0.05
SNX17-202ENST00000427123 FA2HQ7L5A8 372 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 AMN1Q8IY45 258 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 AGPAT4-IT1Q9H0P7 198 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 HSPB8Q9UJY1 196 aa14.76□□□□□ -0.05
SNX17-202ENST00000427123 D6R8Y8 96 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 TWIST1Q15672 202 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 TMEM78Q5T7P6 136 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 LINC00173Q6ZV60 143 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 ORMDL3Q8N138 153 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 PSMG3-AS1Q96PY0 264 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 CNFNQ9BYD5 112 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 HIST1H1AQ02539 215 aaPredicted RBP14.75□□□□□ -0.05
SNX17-202ENST00000427123 C9orf139Q6ZV77 190 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 ZNF575Q86XF7 245 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 PRSS3P2Q8NHM4 247 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 DOPEY1Q5JWR5 2465 aa14.75□□□□□ -0.05
SNX17-202ENST00000427123 CACNA1BQ00975 2339 aa14.74□□□□□ -0.05
SNX17-202ENST00000427123 SLC25A16P16260 332 aa14.74□□□□□ -0.05
SNX17-202ENST00000427123 SSTP61278 116 aa14.74□□□□□ -0.05
SNX17-202ENST00000427123 C9orf47Q6ZRZ4 202 aa14.74□□□□□ -0.05
SNX17-202ENST00000427123 PRELID3AQ96N28 172 aa14.74□□□□□ -0.05
SNX17-202ENST00000427123 MAP1LC3CQ9BXW4 147 aa14.74□□□□□ -0.05
SNX17-202ENST00000427123 MUC21A0A0G2JKD1 596 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 MUC21A0A140T8X8 626 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 TRBV12-3P01733 135 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 MAJINQ3KP22 176 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 MRPL51Q4U2R6 128 aaKnown RBP14.73□□□□□ -0.05
SNX17-202ENST00000427123 MUC21Q5SSG8 566 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 C16orf92Q96LL3 132 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 PET117Q6UWS5 81 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 UNQ9165/PRO28630Q6UXU0 137 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 TMEM191AQ9H0A3 160 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 PPP1R14DQ9NXH3 145 aa14.73□□□□□ -0.05
SNX17-202ENST00000427123 OR4C46A6NHA9 309 aa14.72□□□□□ -0.05
SNX17-202ENST00000427123 PF4V1P10720 104 aa14.72□□□□□ -0.05
SNX17-202ENST00000427123 BLCAPP62952 87 aa14.72□□□□□ -0.05
SNX17-202ENST00000427123 CFAP46Q8IYW2 2715 aa14.72□□□□□ -0.05
SNX17-202ENST00000427123 AVPP01185 164 aa14.71□□□□□ -0.05
SNX17-202ENST00000427123 Q6ZN92 141 aa14.71□□□□□ -0.05
SNX17-202ENST00000427123 OR10AG1Q8NH19 301 aa14.71□□□□□ -0.05
SNX17-202ENST00000427123 HNRNPA3P51991 378 aaKnown RBP14.71□□□□□ -0.05
SNX17-202ENST00000427123 NRGNQ92686 78 aa14.71□□□□□ -0.05
SNX17-202ENST00000427123 SIGLEC8Q9NYZ4 499 aa14.71□□□□□ -0.05
SNX17-202ENST00000427123 SMAD7O15105 426 aaKnown RBP14.7□□□□□ -0.06
SNX17-202ENST00000427123 IGLV1-40P01703 118 aa14.7□□□□□ -0.06
SNX17-202ENST00000427123 IFI27P40305 119 aaPredicted RBP14.7□□□□□ -0.06
SNX17-202ENST00000427123 KLK15Q9H2R5 256 aa14.7□□□□□ -0.06
SNX17-202ENST00000427123 ZNF580Q9UK33 172 aa14.7□□□□□ -0.06
SNX17-202ENST00000427123 A0A0G2JLM5 398 aa14.7□□□□□ -0.06
SNX17-202ENST00000427123 IGHV3-11P01762 117 aa14.7□□□□□ -0.06
SNX17-202ENST00000427123 IGLL1P15814 213 aa14.7□□□□□ -0.06
SNX17-202ENST00000427123 LINC01356Q8N9X3 169 aa14.7□□□□□ -0.06
SNX17-202ENST00000427123 OR4X2Q8NGF9 303 aa14.7□□□□□ -0.06
SNX17-202ENST00000427123 IGSF10Q6WRI0 2623 aa14.69□□□□□ -0.06
SNX17-202ENST00000427123 RPLP1P05386 114 aaKnown RBP14.69□□□□□ -0.06
SNX17-202ENST00000427123 CKS2P33552 79 aa14.69□□□□□ -0.06
SNX17-202ENST00000427123 CFHR3Q02985 330 aa14.69□□□□□ -0.06
SNX17-202ENST00000427123 Q6ZS46 218 aa14.69□□□□□ -0.06
SNX17-202ENST00000427123 ZNF738Q8NE65 137 aa14.69□□□□□ -0.06
SNX17-202ENST00000427123 NPFFR1Q9GZQ6 430 aa14.69□□□□□ -0.06
SNX17-202ENST00000427123 LENEPQ9Y5L5 61 aa14.69□□□□□ -0.06
SNX17-202ENST00000427123 IGKV3D-20A0A0C4DH25 116 aa14.68□□□□□ -0.06
SNX17-202ENST00000427123 LOC389332A0A1B0GUA5 103 aa14.68□□□□□ -0.06
SNX17-202ENST00000427123 GPHB5Q86YW7 130 aa14.68□□□□□ -0.06
SNX17-202ENST00000427123 C20orf173Q96LM9 149 aa14.68□□□□□ -0.06
SNX17-202ENST00000427123 ZNF747Q9BV97 191 aa14.68□□□□□ -0.06
SNX17-202ENST00000427123 ST20Q9HBF5 79 aa14.68□□□□□ -0.06
SNX17-202ENST00000427123 C11orf21Q9P2W6 132 aa14.68□□□□□ -0.06
SNX17-202ENST00000427123 SOCS3O14543 225 aa14.67□□□□□ -0.06
SNX17-202ENST00000427123 PPBPP02775 128 aa14.67□□□□□ -0.06
SNX17-202ENST00000427123 MSRB1Q9NZV6 116 aa14.67□□□□□ -0.06
SNX17-202ENST00000427123 J3QLI3 93 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 NPYP01303 97 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 COX6B1P14854 86 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 SPTAN1Q13813 2472 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms