RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 MAST4O15021 2626 aa11.36□□□□□ -0.59
GINS3-203ENST00000426538 H7BYZ3 331 aa11.36□□□□□ -0.59
GINS3-203ENST00000426538 KRTAP24-1Q3LI83 254 aa11.36□□□□□ -0.59
GINS3-203ENST00000426538 PRR27Q6MZM9 219 aa11.36□□□□□ -0.59
GINS3-203ENST00000426538 NDFIP1Q9BT67 221 aa11.36□□□□□ -0.59
GINS3-203ENST00000426538 CXorf65A6NEN9 183 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 SAP30O75446 220 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 ERCC8Q13216 396 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
GINS3-203ENST00000426538 TMEM61Q8N0U2 210 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 TUBA4BQ9H853 241 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 TRAV25A0A0B4J276 109 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 ZNF688P0C7X2 276 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 CD300EQ496F6 205 aaPredicted RBP11.35□□□□□ -0.59
GINS3-203ENST00000426538 PSMG4Q5JS54 123 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 C9orf47Q6ZRZ4 202 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.35□□□□□ -0.59
GINS3-203ENST00000426538 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
GINS3-203ENST00000426538 PRR25Q96S07 402 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 RNASE7Q9H1E1 156 aaKnown RBP11.35□□□□□ -0.59
GINS3-203ENST00000426538 OSTCQ9NRP0 149 aa11.35□□□□□ -0.59
GINS3-203ENST00000426538 TRAV2A0A0B4J234 112 aa11.34□□□□□ -0.59
GINS3-203ENST00000426538 CT45A10P0DMU9 189 aa11.34□□□□□ -0.59
GINS3-203ENST00000426538 PRIMA1Q86XR5 153 aa11.34□□□□□ -0.59
GINS3-203ENST00000426538 Q8TAT8 98 aa11.34□□□□□ -0.59
GINS3-203ENST00000426538 LINC00477Q96M19 166 aa11.34□□□□□ -0.59
GINS3-203ENST00000426538 ASCL2Q99929 193 aa11.34□□□□□ -0.59
GINS3-203ENST00000426538 ZNF705DP0CH99 300 aaPredicted RBP11.33□□□□□ -0.6
GINS3-203ENST00000426538 ZNF705BP0CI00 300 aaPredicted RBP11.33□□□□□ -0.6
GINS3-203ENST00000426538 ZNF138P52744 262 aa11.33□□□□□ -0.6
GINS3-203ENST00000426538 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
GINS3-203ENST00000426538 OR8A1Q8NGG7 326 aa11.33□□□□□ -0.6
GINS3-203ENST00000426538 OR4C46A6NHA9 309 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 ZNF705GA8MUZ8 300 aaPredicted RBP11.32□□□□□ -0.6
GINS3-203ENST00000426538 S100PP25815 95 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 HIST1H1AQ02539 215 aaPredicted RBP11.32□□□□□ -0.6
GINS3-203ENST00000426538 FAM231DQ6ZW35 169 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 LINC00482Q8N8I6 264 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 NUDT10Q8NFP7 164 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 NUDT11Q96G61 164 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 C8orf49Q96NF6 230 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 SPAG8Q99932 426 aaPredicted RBP11.32□□□□□ -0.6
GINS3-203ENST00000426538 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 URGCP-MRPS24S4R325 110 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 SMUG1Q53HV7 270 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 ZC2HC1AQ96GY0 325 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 PPP1R14DQ9NXH3 145 aa11.32□□□□□ -0.6
GINS3-203ENST00000426538 F6UB75 175 aa11.31□□□□□ -0.6
GINS3-203ENST00000426538 GATCO43716 136 aaKnown RBP11.31□□□□□ -0.6
GINS3-203ENST00000426538 P01737 135 aa11.31□□□□□ -0.6
GINS3-203ENST00000426538 DEFB1P60022 68 aa11.31□□□□□ -0.6
GINS3-203ENST00000426538 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
GINS3-203ENST00000426538 KCNIP4Q6PIL6 250 aa11.31□□□□□ -0.6
GINS3-203ENST00000426538 LENEPQ9Y5L5 61 aa11.31□□□□□ -0.6
GINS3-203ENST00000426538 V9GYV3 84 aa11.31□□□□□ -0.6
GINS3-203ENST00000426538 NPIPB6E9PJ23 425 aa11.3□□□□□ -0.6
GINS3-203ENST00000426538 C3orf56Q8N813 242 aa11.3□□□□□ -0.6
GINS3-203ENST00000426538 IMMP2LQ96T52 175 aa11.3□□□□□ -0.6
GINS3-203ENST00000426538 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
GINS3-203ENST00000426538 ATRQ13535 2644 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 IZUMO1RA6ND01 250 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 ELOBQ15370 118 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 LINC00322Q6ZN03 302 aaPredicted RBP11.29□□□□□ -0.6
GINS3-203ENST00000426538 COX8CQ7Z4L0 72 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 OR2K2Q8NGT1 345 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 TMEM158Q8WZ71 300 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 ZNF747Q9BV97 191 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 C19orf71A6NCJ1 209 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 IGLV1-51P01701 117 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 CD33P20138 364 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 DEFB131AP59861 70 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 FAM162BQ5T6X4 162 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 IL36BQ9NZH7 164 aa11.29□□□□□ -0.6
GINS3-203ENST00000426538 C12orf54Q6X4T0 127 aa11.28□□□□□ -0.6
GINS3-203ENST00000426538 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
GINS3-203ENST00000426538 ZNF256Q9Y2P7 627 aaPredicted RBP11.28□□□□□ -0.6
GINS3-203ENST00000426538 A0A0J9YX75 114 aa11.27□□□□□ -0.61
GINS3-203ENST00000426538 COLCA2A8K830 154 aa11.27□□□□□ -0.61
GINS3-203ENST00000426538 FABP5P3A8MUU1 101 aa11.27□□□□□ -0.61
GINS3-203ENST00000426538 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.61
GINS3-203ENST00000426538 PFN1P07737 140 aaKnown RBP11.27□□□□□ -0.61
GINS3-203ENST00000426538 CRIP1P50238 77 aa11.27□□□□□ -0.61
GINS3-203ENST00000426538 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
GINS3-203ENST00000426538 GDF5OSQ5U4N7 250 aa11.27□□□□□ -0.61
GINS3-203ENST00000426538 OR4B1Q8NGF8 309 aa11.27□□□□□ -0.61
GINS3-203ENST00000426538 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
GINS3-203ENST00000426538 RPP21Q9H633 154 aaKnown RBP11.27□□□□□ -0.61
GINS3-203ENST00000426538 TENM1Q9UKZ4 2725 aa11.27□□□□□ -0.61
GINS3-203ENST00000426538 INSL3P51460 131 aa11.26□□□□□ -0.61
GINS3-203ENST00000426538 TRBV7-9A0A0J9YWB2 115 aa11.26□□□□□ -0.61
GINS3-203ENST00000426538 A0A1W2PPQ1 181 aa11.26□□□□□ -0.61
GINS3-203ENST00000426538 A8MWL6 223 aa11.26□□□□□ -0.61
GINS3-203ENST00000426538 SH2D1AO60880 128 aa11.26□□□□□ -0.61
GINS3-203ENST00000426538 CA1P00915 261 aaPredicted RBP11.26□□□□□ -0.61
GINS3-203ENST00000426538 GPX1P07203 203 aa11.26□□□□□ -0.61
GINS3-203ENST00000426538 CMC4P56277 68 aaPredicted RBP11.26□□□□□ -0.61
GINS3-203ENST00000426538 C9orf66Q5T8R8 295 aa11.26□□□□□ -0.61
GINS3-203ENST00000426538 OR2D3Q8NGH3 330 aa11.26□□□□□ -0.61
GINS3-203ENST00000426538 MAP6D1Q9H9H5 199 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms