RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 TMED6Q8WW62 240 aa9.09□□□□□ -0.95
GPC1-204ENST00000426280 IGF2BP2-AS1Q96M15 143 aa9.09□□□□□ -0.95
GPC1-204ENST00000426280 BOLA1Q9Y3E2 137 aa9.09□□□□□ -0.95
GPC1-204ENST00000426280 VPS13DQ5THJ4 4388 aa9.08□□□□□ -0.96
GPC1-204ENST00000426280 CTXND1A0A1B0GTU2 59 aa9.08□□□□□ -0.96
GPC1-204ENST00000426280 GCHFRP30047 84 aa9.08□□□□□ -0.96
GPC1-204ENST00000426280 FGF8P55075 233 aaPredicted RBP9.08□□□□□ -0.96
GPC1-204ENST00000426280 EIF5AP63241 154 aaKnown RBP9.08□□□□□ -0.96
GPC1-204ENST00000426280 PDE6HQ13956 83 aa9.08□□□□□ -0.96
GPC1-204ENST00000426280 LGALS9CQ6DKI2 356 aa9.08□□□□□ -0.96
GPC1-204ENST00000426280 STOML3Q8TAV4 291 aa9.08□□□□□ -0.96
GPC1-204ENST00000426280 Q9H3A6 140 aa9.08□□□□□ -0.96
GPC1-204ENST00000426280 TMPRSS5Q9H3S3 457 aa9.08□□□□□ -0.96
GPC1-204ENST00000426280 DKK2Q9UBU2 259 aa9.08□□□□□ -0.96
GPC1-204ENST00000426280 TRAV10A0A0B4J240 114 aa9.07□□□□□ -0.96
GPC1-204ENST00000426280 PLAC8L1A1L4L8 177 aa9.07□□□□□ -0.96
GPC1-204ENST00000426280 SMIM9A6NGZ8 99 aa9.07□□□□□ -0.96
GPC1-204ENST00000426280 DUSP14O95147 198 aaKnown RBP9.07□□□□□ -0.96
GPC1-204ENST00000426280 FAM222AQ5U5X8 452 aa9.07□□□□□ -0.96
GPC1-204ENST00000426280 IQCF2Q8IXL9 164 aa9.07□□□□□ -0.96
GPC1-204ENST00000426280 AAMDCQ9H7C9 122 aa9.07□□□□□ -0.96
GPC1-204ENST00000426280 YTHDF2Q9Y5A9 579 aaKnown RBP9.07□□□□□ -0.96
GPC1-204ENST00000426280 BIRC6Q9NR09 4857 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 IGHV4-4A0A075B6R2 117 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 DEFB131BA0A096LNP1 70 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 LOC102723971A0A1B0GUV8 181 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 MAP1LC3B2A6NCE7 125 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 C11orf94C9JXX5 98 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 CXorf1O96002 111 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 ERCC8Q13216 396 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 SLC51BQ86UW2 128 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 FAM213BQ8TBF2 198 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 MAP1LC3BQ9GZQ8 125 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 PRELID1Q9Y255 219 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 GOLT1BQ9Y3E0 138 aa9.06□□□□□ -0.96
GPC1-204ENST00000426280 IGKV2-40A0A087WW87 121 aaPredicted RBP9.05□□□□□ -0.96
GPC1-204ENST00000426280 A0A1B0GV50 99 aa9.05□□□□□ -0.96
GPC1-204ENST00000426280 PGPA6NDG6 321 aa9.05□□□□□ -0.96
GPC1-204ENST00000426280 BOLA2-SMG1P6H3BVE0 249 aa9.05□□□□□ -0.96
GPC1-204ENST00000426280 IGKV2D-40P01614 121 aaPredicted RBP9.05□□□□□ -0.96
GPC1-204ENST00000426280 HBE1P02100 147 aa9.05□□□□□ -0.96
GPC1-204ENST00000426280 SPART-AS1P0CW21 52 aa9.05□□□□□ -0.96
GPC1-204ENST00000426280 OR10J6PQ8NGY7 276 aa9.05□□□□□ -0.96
GPC1-204ENST00000426280 SUN5Q8TC36 379 aa9.05□□□□□ -0.96
GPC1-204ENST00000426280 MRPL53Q96EL3 112 aaKnown RBP9.05□□□□□ -0.96
GPC1-204ENST00000426280 KMT2AQ03164 3969 aa9.05□□□□□ -0.96
GPC1-204ENST00000426280 UMAD1C9J7I0 102 aa9.04□□□□□ -0.96
GPC1-204ENST00000426280 CT45A10P0DMU9 189 aa9.04□□□□□ -0.96
GPC1-204ENST00000426280 RRN3P1Q2M238 152 aa9.04□□□□□ -0.96
GPC1-204ENST00000426280 FAM74A1Q5RGS3 127 aa9.04□□□□□ -0.96
GPC1-204ENST00000426280 VGLL1Q99990 258 aa9.04□□□□□ -0.96
GPC1-204ENST00000426280 RPH3ALQ9UNE2 315 aa9.04□□□□□ -0.96
GPC1-204ENST00000426280 NPIPB6E9PJ23 425 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 J3KRW8 73 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 UBE2G2P60604 165 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 GNG5P63218 68 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 LYPD1Q8N2G4 141 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 SFT2D1Q8WV19 159 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 NIPSNAP3BQ9BS92 247 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 TMEM208Q9BTX3 173 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 OTORQ9NRC9 128 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 TMEM167BQ9NRX6 74 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 PPP1R14DQ9NXH3 145 aa9.03□□□□□ -0.96
GPC1-204ENST00000426280 GGTLC3B5MD39 225 aa9.02□□□□□ -0.97
GPC1-204ENST00000426280 DIRC3C9JPN6 131 aa9.02□□□□□ -0.97
GPC1-204ENST00000426280 INSP01308 110 aa9.02□□□□□ -0.97
GPC1-204ENST00000426280 AMBPP02760 352 aa9.02□□□□□ -0.97
GPC1-204ENST00000426280 HTN3P15516 51 aa9.02□□□□□ -0.97
GPC1-204ENST00000426280 SULT1A2P50226 295 aa9.02□□□□□ -0.97
GPC1-204ENST00000426280 Q6ZQT7 251 aa9.02□□□□□ -0.97
GPC1-204ENST00000426280 MBD3L1Q8WWY6 194 aa9.02□□□□□ -0.97
GPC1-204ENST00000426280 LINC01587Q99440 93 aa9.02□□□□□ -0.97
GPC1-204ENST00000426280 TMEM189A5PLL7 270 aa9.01□□□□□ -0.97
GPC1-204ENST00000426280 SLC25A5P05141 298 aaKnown RBP9.01□□□□□ -0.97
GPC1-204ENST00000426280 H2AFB1P0C5Y9 115 aa9.01□□□□□ -0.97
GPC1-204ENST00000426280 HTN1P15515 57 aa9.01□□□□□ -0.97
GPC1-204ENST00000426280 CSN1S1P47710 185 aa9.01□□□□□ -0.97
GPC1-204ENST00000426280 SUMO1P63165 101 aaKnown RBP9.01□□□□□ -0.97
GPC1-204ENST00000426280 GFI1BQ5VTD9 330 aa9.01□□□□□ -0.97
GPC1-204ENST00000426280 EIF5AL1Q6IS14 154 aaKnown RBP9.01□□□□□ -0.97
GPC1-204ENST00000426280 ALKAL2Q6UX46 152 aa9.01□□□□□ -0.97
GPC1-204ENST00000426280 DPPA3Q6W0C5 159 aa9.01□□□□□ -0.97
GPC1-204ENST00000426280 Q8TAT8 98 aa9.01□□□□□ -0.97
GPC1-204ENST00000426280 CMTM2Q8TAZ6 248 aa9.01□□□□□ -0.97
GPC1-204ENST00000426280 DNAH10Q8IVF4 4471 aa9□□□□□ -0.97
GPC1-204ENST00000426280 CDKN1BP46527 198 aa9□□□□□ -0.97
GPC1-204ENST00000426280 TCTAP57738 103 aa9□□□□□ -0.97
GPC1-204ENST00000426280 CCL20P78556 96 aa9□□□□□ -0.97
GPC1-204ENST00000426280 C9orf47Q6ZRZ4 202 aa9□□□□□ -0.97
GPC1-204ENST00000426280 GOLT1AQ6ZVE7 132 aa9□□□□□ -0.97
GPC1-204ENST00000426280 SGK494Q96LW2 274 aa9□□□□□ -0.97
GPC1-204ENST00000426280 LINC00477Q96M19 166 aa9□□□□□ -0.97
GPC1-204ENST00000426280 TRAV8-1A0A0A6YYK1 113 aa8.99□□□□□ -0.97
GPC1-204ENST00000426280 A0A1W2PRE2 83 aa8.99□□□□□ -0.97
GPC1-204ENST00000426280 FAM74A7A6NL05 159 aa8.99□□□□□ -0.97
GPC1-204ENST00000426280 DEFB130BP0DP73 79 aa8.99□□□□□ -0.97
GPC1-204ENST00000426280 DEFB130AP0DP74 79 aa8.99□□□□□ -0.97
GPC1-204ENST00000426280 RAB5CP51148 216 aa8.99□□□□□ -0.97
GPC1-204ENST00000426280 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms