RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 P0DMU3 169 aa12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 FAM231AP0DMU4 169 aa12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 FAM231CP0DMU5 169 aa12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 CD300CQ08708 224 aa12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 TMEM263Q8WUH6 116 aaKnown RBP12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 MED28Q9H204 178 aa12.91□□□□□ -0.34
SMARCAL1-205ENST00000425815 CBY3A6NI87 242 aa12.9□□□□□ -0.34
SMARCAL1-205ENST00000425815 SLC25A5P05141 298 aaKnown RBP12.9□□□□□ -0.34
SMARCAL1-205ENST00000425815 LINC00612Q8N6U2 182 aa12.9□□□□□ -0.34
SMARCAL1-205ENST00000425815 AAMDCQ9H7C9 122 aa12.9□□□□□ -0.34
SMARCAL1-205ENST00000425815 OR7C2O60412 319 aa12.89□□□□□ -0.35
SMARCAL1-205ENST00000425815 CRISP2P16562 243 aa12.89□□□□□ -0.35
SMARCAL1-205ENST00000425815 Q6ZQT7 251 aa12.89□□□□□ -0.35
SMARCAL1-205ENST00000425815 ZFAND2AQ8N6M9 145 aa12.89□□□□□ -0.35
SMARCAL1-205ENST00000425815 C7orf71A4D174 169 aa12.88□□□□□ -0.35
SMARCAL1-205ENST00000425815 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-205ENST00000425815 BTN1A1Q13410 526 aa12.88□□□□□ -0.35
SMARCAL1-205ENST00000425815 PRR9Q5T870 116 aa12.88□□□□□ -0.35
SMARCAL1-205ENST00000425815 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
SMARCAL1-205ENST00000425815 FAT2Q9NYQ8 4349 aa12.88□□□□□ -0.35
SMARCAL1-205ENST00000425815 F5H768 121 aa12.87□□□□□ -0.35
SMARCAL1-205ENST00000425815 M6PRP20645 277 aa12.87□□□□□ -0.35
SMARCAL1-205ENST00000425815 CCDC28AQ8IWP9 274 aa12.87□□□□□ -0.35
SMARCAL1-205ENST00000425815 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
SMARCAL1-205ENST00000425815 AQP10Q96PS8 301 aa12.87□□□□□ -0.35
SMARCAL1-205ENST00000425815 PYGO2Q9BRQ0 406 aa12.87□□□□□ -0.35
SMARCAL1-205ENST00000425815 Q9H3A6 140 aa12.87□□□□□ -0.35
SMARCAL1-205ENST00000425815 ATP5G1P05496 136 aa12.86□□□□□ -0.35
SMARCAL1-205ENST00000425815 RNASE4P34096 147 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-205ENST00000425815 ATP5G3P48201 142 aa12.86□□□□□ -0.35
SMARCAL1-205ENST00000425815 RAB2AP61019 212 aa12.86□□□□□ -0.35
SMARCAL1-205ENST00000425815 UBE2L3P68036 154 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-205ENST00000425815 KHDC3LQ587J8 217 aa12.86□□□□□ -0.35
SMARCAL1-205ENST00000425815 LINC00467Q9BRT7 94 aa12.86□□□□□ -0.35
SMARCAL1-205ENST00000425815 NMBP08949 121 aa12.85□□□□□ -0.35
SMARCAL1-205ENST00000425815 GIPP09681 153 aaPredicted RBP12.85□□□□□ -0.35
SMARCAL1-205ENST00000425815 TAS2R45P59539 299 aa12.85□□□□□ -0.35
SMARCAL1-205ENST00000425815 ACOT6Q3I5F7 207 aaPredicted RBP12.85□□□□□ -0.35
SMARCAL1-205ENST00000425815 TMEM78Q5T7P6 136 aa12.85□□□□□ -0.35
SMARCAL1-205ENST00000425815 C11orf72Q8NBR9 251 aa12.85□□□□□ -0.35
SMARCAL1-205ENST00000425815 HECTD4Q9Y4D8 3996 aa12.85□□□□□ -0.35
SMARCAL1-205ENST00000425815 GPX1P07203 203 aa12.84□□□□□ -0.35
SMARCAL1-205ENST00000425815 ZNF138P52744 262 aa12.84□□□□□ -0.35
SMARCAL1-205ENST00000425815 DAZ2Q13117 558 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-205ENST00000425815 Q8TAT8 98 aa12.84□□□□□ -0.35
SMARCAL1-205ENST00000425815 GAGE12BA1L429 117 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 RBAKDNA6NC62 111 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 DIRC3C9JPN6 131 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 HMGB3O15347 200 aaKnown RBP12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 GAGE7O76087 117 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 GAGE12FP0CL80 117 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 GAGE12GP0CL81 117 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 GAGE12IP0CL82 117 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 ANXA2RQ3ZCQ2 193 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 RNF212Q495C1 297 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 C15orf53Q8NAA6 179 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 HSD17B11Q8NBQ5 300 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 OR10G4Q8NGN3 311 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 OR10G9Q8NGN4 311 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 OR10G7Q8NGN6 311 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 GSN-AS1Q9NRJ2 163 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 TP53TG3Q9ULZ0 132 aa12.83□□□□□ -0.36
SMARCAL1-205ENST00000425815 TRBV7-9A0A0J9YWB2 115 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 A0A1W2PPV4 95 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 PGPA6NDG6 321 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 SNURFLB1AK76 121 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 G3V3Q6 166 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 M0R2N4 97 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 HOXA5P20719 270 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 ATP6V0CP27449 155 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 CSN1S1P47710 185 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 Q6ZTI0 123 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 EIF4E3Q8N5X7 224 aaKnown RBP12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 OR2G3Q8NGZ4 309 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 ASB13Q8WXK3 278 aa12.82□□□□□ -0.36
SMARCAL1-205ENST00000425815 RNF222A6NCQ9 220 aa12.81□□□□□ -0.36
SMARCAL1-205ENST00000425815 ZNF266Q14584 549 aa12.81□□□□□ -0.36
SMARCAL1-205ENST00000425815 LGALS9BQ3B8N2 356 aa12.81□□□□□ -0.36
SMARCAL1-205ENST00000425815 PQLC2Q6ZP29 291 aa12.81□□□□□ -0.36
SMARCAL1-205ENST00000425815 Q6ZR54 194 aa12.81□□□□□ -0.36
SMARCAL1-205ENST00000425815 HYLS1Q96M11 299 aa12.81□□□□□ -0.36
SMARCAL1-205ENST00000425815 OTORQ9NRC9 128 aa12.81□□□□□ -0.36
SMARCAL1-205ENST00000425815 KLF12Q9Y4X4 402 aa12.81□□□□□ -0.36
SMARCAL1-205ENST00000425815 IGLV2-18A0A075B6J9 118 aa12.8□□□□□ -0.36
SMARCAL1-205ENST00000425815 RGS21Q2M5E4 152 aa12.8□□□□□ -0.36
SMARCAL1-205ENST00000425815 UBE2DNLQ8IWF7 75 aa12.8□□□□□ -0.36
SMARCAL1-205ENST00000425815 RXFP4Q8TDU9 374 aa12.8□□□□□ -0.36
SMARCAL1-205ENST00000425815 PSMG3Q9BT73 122 aaPredicted RBP12.8□□□□□ -0.36
SMARCAL1-205ENST00000425815 SH3BGRL3Q9H299 93 aa12.8□□□□□ -0.36
SMARCAL1-205ENST00000425815 TNFSF18Q9UNG2 199 aa12.8□□□□□ -0.36
SMARCAL1-205ENST00000425815 RTL8CO15255 209 aa12.79□□□□□ -0.36
SMARCAL1-205ENST00000425815 NUDT3O95989 172 aa12.79□□□□□ -0.36
SMARCAL1-205ENST00000425815 STAG3L2P0CL84 134 aa12.79□□□□□ -0.36
SMARCAL1-205ENST00000425815 STAG3L3P0CL85 134 aa12.79□□□□□ -0.36
SMARCAL1-205ENST00000425815 ZNF680Q8NEM1 530 aa12.79□□□□□ -0.36
SMARCAL1-205ENST00000425815 SUN5Q8TC36 379 aa12.79□□□□□ -0.36
SMARCAL1-205ENST00000425815 IGHV1OR15-1A0A075B7D0 117 aa12.78□□□□□ -0.36
SMARCAL1-205ENST00000425815 SPINK4O60575 86 aa12.78□□□□□ -0.36
SMARCAL1-205ENST00000425815 OR5I1Q13606 314 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms