RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 YTHDF2Q9Y5A9 579 aaKnown RBP9.2□□□□□ -0.94
VRK3-203ENST00000424804 IGKV2-40A0A087WW87 121 aaPredicted RBP9.19□□□□□ -0.94
VRK3-203ENST00000424804 IGKV2D-40P01614 121 aaPredicted RBP9.19□□□□□ -0.94
VRK3-203ENST00000424804 P0DMU3 169 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 FAM231AP0DMU4 169 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 FAM231CP0DMU5 169 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 CT45A10P0DMU9 189 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 HTN3P15516 51 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 M6PRP20645 277 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 LEPP41159 167 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 RANP62826 216 aaKnown RBP9.19□□□□□ -0.94
VRK3-203ENST00000424804 LGALS9BQ3B8N2 356 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 FAM222AQ5U5X8 452 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 OR10G4Q8NGN3 311 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 OR10G9Q8NGN4 311 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 OR10G7Q8NGN6 311 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 FXYD5Q96DB9 178 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 NDUFAF3Q9BU61 184 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 RPH3ALQ9UNE2 315 aa9.19□□□□□ -0.94
VRK3-203ENST00000424804 NPIPB6E9PJ23 425 aa9.18□□□□□ -0.94
VRK3-203ENST00000424804 M0R2N4 97 aa9.18□□□□□ -0.94
VRK3-203ENST00000424804 ARPC5O15511 151 aa9.18□□□□□ -0.94
VRK3-203ENST00000424804 ATP6V0CP27449 155 aa9.18□□□□□ -0.94
VRK3-203ENST00000424804 GFI1BQ5VTD9 330 aa9.18□□□□□ -0.94
VRK3-203ENST00000424804 RPL7L1Q6DKI1 246 aaKnown RBP9.18□□□□□ -0.94
VRK3-203ENST00000424804 MRPL53Q96EL3 112 aaKnown RBP9.18□□□□□ -0.94
VRK3-203ENST00000424804 ZNF503Q96F45 646 aa9.18□□□□□ -0.94
VRK3-203ENST00000424804 HYLS1Q96M11 299 aa9.18□□□□□ -0.94
VRK3-203ENST00000424804 SH3BGRL3Q9H299 93 aa9.18□□□□□ -0.94
VRK3-203ENST00000424804 TNFSF18Q9UNG2 199 aa9.18□□□□□ -0.94
VRK3-203ENST00000424804 BORCS7-ASMTA0A0B4J1R7 106 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 TRAV12-3A0A0B4J271 114 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 RNF222A6NCQ9 220 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 PRSS29PA6NIE9 313 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 AZU1P20160 251 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 CSN1S1P47710 185 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 TMEM78Q5T7P6 136 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 TMEM256Q8N2U0 113 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 NIPSNAP3BQ9BS92 247 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 Q9H3A6 140 aa9.17□□□□□ -0.94
VRK3-203ENST00000424804 CDC34P49427 236 aaPredicted RBP9.16□□□□□ -0.94
VRK3-203ENST00000424804 DAD1P61803 113 aa9.16□□□□□ -0.94
VRK3-203ENST00000424804 IQCF2Q8IXL9 164 aa9.16□□□□□ -0.94
VRK3-203ENST00000424804 FAM210BQ96KR6 192 aa9.16□□□□□ -0.94
VRK3-203ENST00000424804 VGLL1Q99990 258 aa9.16□□□□□ -0.94
VRK3-203ENST00000424804 AGPAT4-IT1Q9H0P7 198 aa9.16□□□□□ -0.94
VRK3-203ENST00000424804 APOBP04114 4563 aaKnown RBP9.15□□□□□ -0.94
VRK3-203ENST00000424804 TEX48A0A1B0GUV7 120 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 H7BYZ3 331 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 DEFB130BP0DP73 79 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 DEFB130AP0DP74 79 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 RNASE4P34096 147 aaKnown RBP9.15□□□□□ -0.94
VRK3-203ENST00000424804 TAS2R60P59551 318 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 CCDC28AQ8IWP9 274 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 Q8TAT8 98 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 CMTM2Q8TAZ6 248 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 LINC00477Q96M19 166 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 PSMG3Q9BT73 122 aaPredicted RBP9.15□□□□□ -0.94
VRK3-203ENST00000424804 DNAH5Q8TE73 4624 aa9.15□□□□□ -0.94
VRK3-203ENST00000424804 PGPA6NDG6 321 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 G3V3Q6 166 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 MBP02144 154 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 GPX1P07203 203 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 BTN1A1Q13410 526 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 FAM74A1Q5RGS3 127 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 PQLC2Q6ZP29 291 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 OR2G3Q8NGZ4 309 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 RAB24Q969Q5 203 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 C16orf74Q96GX8 76 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 KRTAP4-5Q9BYR2 181 aa9.14□□□□□ -0.95
VRK3-203ENST00000424804 IGLV2-18A0A075B6J9 118 aa9.13□□□□□ -0.95
VRK3-203ENST00000424804 PLAC8L1A1L4L8 177 aa9.13□□□□□ -0.95
VRK3-203ENST00000424804 C7orf71A4D174 169 aa9.13□□□□□ -0.95
VRK3-203ENST00000424804 SLC25A5P05141 298 aaKnown RBP9.13□□□□□ -0.95
VRK3-203ENST00000424804 SERF2P84101 59 aa9.13□□□□□ -0.95
VRK3-203ENST00000424804 RNF212Q495C1 297 aa9.13□□□□□ -0.95
VRK3-203ENST00000424804 LYPD1Q8N2G4 141 aa9.13□□□□□ -0.95
VRK3-203ENST00000424804 GNPNAT1Q96EK6 184 aaPredicted RBP9.13□□□□□ -0.95
VRK3-203ENST00000424804 ODF3Q96PU9 254 aa9.13□□□□□ -0.95
VRK3-203ENST00000424804 C20orf144Q9BQM9 153 aa9.13□□□□□ -0.95
VRK3-203ENST00000424804 ACTR3CQ9C0K3 210 aaPredicted RBP9.13□□□□□ -0.95
VRK3-203ENST00000424804 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
VRK3-203ENST00000424804 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
VRK3-203ENST00000424804 ZNF138P52744 262 aa9.12□□□□□ -0.95
VRK3-203ENST00000424804 CD300CQ08708 224 aa9.12□□□□□ -0.95
VRK3-203ENST00000424804 TMEM88Q6PEY1 159 aa9.12□□□□□ -0.95
VRK3-203ENST00000424804 C9orf47Q6ZRZ4 202 aa9.12□□□□□ -0.95
VRK3-203ENST00000424804 RXFP4Q8TDU9 374 aa9.12□□□□□ -0.95
VRK3-203ENST00000424804 TMEM263Q8WUH6 116 aaKnown RBP9.12□□□□□ -0.95
VRK3-203ENST00000424804 OTORQ9NRC9 128 aa9.12□□□□□ -0.95
VRK3-203ENST00000424804 SNURFLB1AK76 121 aa9.11□□□□□ -0.95
VRK3-203ENST00000424804 DIRC3C9JPN6 131 aa9.11□□□□□ -0.95
VRK3-203ENST00000424804 TAAR5O14804 337 aa9.11□□□□□ -0.95
VRK3-203ENST00000424804 STAG3L2P0CL84 134 aa9.11□□□□□ -0.95
VRK3-203ENST00000424804 STAG3L3P0CL85 134 aa9.11□□□□□ -0.95
VRK3-203ENST00000424804 GCHFRP30047 84 aa9.11□□□□□ -0.95
VRK3-203ENST00000424804 GNG5P63218 68 aa9.11□□□□□ -0.95
VRK3-203ENST00000424804 AKR1C8PQ5T2L2 129 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms