RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 IGHG4P01861 327 aa9.22□□□□□ -0.93
PTPRN-204ENST00000423636 CSN1S1P47710 185 aa9.22□□□□□ -0.93
PTPRN-204ENST00000423636 RBPMS2Q6ZRY4 209 aaKnown RBP9.22□□□□□ -0.93
PTPRN-204ENST00000423636 REC114Q7Z4M0 266 aa9.22□□□□□ -0.93
PTPRN-204ENST00000423636 PIFOQ8TCI5 191 aa9.22□□□□□ -0.93
PTPRN-204ENST00000423636 EVI2AP22794 236 aa9.21□□□□□ -0.93
PTPRN-204ENST00000423636 SPATA45Q537H7 98 aa9.21□□□□□ -0.93
PTPRN-204ENST00000423636 RNF5Q99942 180 aa9.21□□□□□ -0.93
PTPRN-204ENST00000423636 TWIST1Q15672 202 aa9.21□□□□□ -0.93
PTPRN-204ENST00000423636 C5orf56Q8N8D9 126 aa9.21□□□□□ -0.93
PTPRN-204ENST00000423636 hDV102S1A0JD36 115 aa9.21□□□□□ -0.94
PTPRN-204ENST00000423636 SMAD7O15105 426 aaKnown RBP9.21□□□□□ -0.94
PTPRN-204ENST00000423636 Q0VG73 95 aa9.21□□□□□ -0.94
PTPRN-204ENST00000423636 PRSS22Q9GZN4 317 aa9.21□□□□□ -0.94
PTPRN-204ENST00000423636 TGFAP01135 160 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 MINOS1Q5TGZ0 78 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 ZNF502Q8TBZ5 544 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 PIMREGQ9BSJ6 248 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 MINOS1-NBL1R4GNA1 71 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 TRAV41A0A0B4J266 112 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 IGHV1-69DA0A0B4J2H0 117 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 TMEM189A5PLL7 270 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 K7EQM0 130 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 IGHV1-69P01742 117 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 MT-ND6P03923 174 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 FAM231DQ6ZW35 169 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 Q8N976 141 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 D6R8Y8 96 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 RNF223E7ERA6 249 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 IGHV4-59P01825 116 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 TM4SF20Q53R12 229 aa9.2□□□□□ -0.94
PTPRN-204ENST00000423636 OVOL3O00110 214 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 FOXE3Q13461 319 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 A0A1B0GUT8 65 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 CLPSL1A2RUU4 121 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 IFI27P40305 119 aaPredicted RBP9.19□□□□□ -0.94
PTPRN-204ENST00000423636 PAFAH1B2P68402 229 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 C11orf44Q8N8P7 122 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 C18orf15Q96N68 181 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 TMEM14CQ9P0S9 112 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 HIVEP2P31629 2446 aa9.19□□□□□ -0.94
PTPRN-204ENST00000423636 GCN1Q92616 2671 aaKnown RBP9.18□□□□□ -0.94
PTPRN-204ENST00000423636 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 RPL7P18124 248 aaKnown RBP9.18□□□□□ -0.94
PTPRN-204ENST00000423636 ATP5G2Q06055 141 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 PRR25Q96S07 402 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 TXN2Q99757 166 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 NDUFAF3Q9BU61 184 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 C1orf194Q5T5A4 169 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 OR8A1Q8NGG7 326 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 C10orf105Q8TEF2 133 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 DUX3Q96PT4 197 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.18□□□□□ -0.94
PTPRN-204ENST00000423636 BUB3O43684 328 aa9.18□□□□□ -0.94
PTPRN-204ENST00000423636 TRBV9A0A0B4J1U6 114 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 GOSR1O95249 250 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 ARL3P36405 182 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 PRSS3P2Q8NHM4 247 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 FAM110DQ8TAY7 271 aaPredicted RBP9.17□□□□□ -0.94
PTPRN-204ENST00000423636 C16orf92Q96LL3 132 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 NBEAL2Q6ZNJ1 2754 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 TRAV30A0A087WSZ9 112 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 LOC102724200A0A096LPH7 203 aaPredicted RBP9.17□□□□□ -0.94
PTPRN-204ENST00000423636 TCAPO15273 167 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 HINT1P49773 126 aaPredicted RBP9.17□□□□□ -0.94
PTPRN-204ENST00000423636 OR10J3Q5JRS4 329 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 Q6ZN92 141 aa9.17□□□□□ -0.94
PTPRN-204ENST00000423636 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 C1orf122Q6ZSJ8 110 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 AGPAT4-IT1Q9H0P7 198 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 BEX4Q9NWD9 120 aaPredicted RBP9.16□□□□□ -0.94
PTPRN-204ENST00000423636 UFC1Q9Y3C8 167 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 LINC00614P0C842 121 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 SFTPCP11686 197 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 EBI3Q14213 229 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 MSMBP08118 114 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 PAX8Q06710 450 aa9.16□□□□□ -0.94
PTPRN-204ENST00000423636 LEPROTL1O95214 131 aa9.15□□□□□ -0.94
PTPRN-204ENST00000423636 DEFB112Q30KQ8 113 aa9.15□□□□□ -0.94
PTPRN-204ENST00000423636 FAM162BQ5T6X4 162 aa9.15□□□□□ -0.94
PTPRN-204ENST00000423636 PRSS57Q6UWY2 283 aa9.15□□□□□ -0.94
PTPRN-204ENST00000423636 C8orf86Q6ZUL3 223 aa9.15□□□□□ -0.94
PTPRN-204ENST00000423636 ZNF738Q8NE65 137 aa9.15□□□□□ -0.94
PTPRN-204ENST00000423636 EEF1AKMT3Q96AZ1 226 aa9.15□□□□□ -0.94
PTPRN-204ENST00000423636 MOB4Q9Y3A3 225 aa9.15□□□□□ -0.94
PTPRN-204ENST00000423636 METTL26Q96S19 204 aa9.15□□□□□ -0.94
PTPRN-204ENST00000423636 RAB4AP20338 218 aa9.15□□□□□ -0.95
PTPRN-204ENST00000423636 DEFB136Q30KP8 78 aa9.15□□□□□ -0.95
PTPRN-204ENST00000423636 PRR9Q5T870 116 aa9.15□□□□□ -0.95
PTPRN-204ENST00000423636 SPOCK3Q9BQ16 436 aa9.15□□□□□ -0.95
PTPRN-204ENST00000423636 HTN1P15515 57 aa9.14□□□□□ -0.95
PTPRN-204ENST00000423636 SRSF1Q07955 248 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTPRN-204ENST00000423636 OR4X2Q8NGF9 303 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms