RNA–Protein interactions for RNA: ENST00000423575.5

LINC00539-202, long intergenic non-protein coding RNA 539, humanhuman

TSL 3 BASIC

Gene LINC00539, Length 699 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-202ENST00000423575 IFITM2Q01629 132 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 PMS2P11Q13670 270 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 SPINK13Q1W4C9 94 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 DEFB135Q30KP9 77 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 LYPD6BQ8NI32 183 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 TM2D3Q9BRN9 247 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 NKX6-2Q9C056 277 aaPredicted RBP8.84□□□□□ -0.99
LINC00539-202ENST00000423575 XCL2Q9UBD3 114 aa8.84□□□□□ -0.99
LINC00539-202ENST00000423575 TRAV8-1A0A0A6YYK1 113 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 PEX7O00628 323 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 NMBP08949 121 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 BCL2P10415 239 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 TMEM78Q5T7P6 136 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 Q6ZWC4 215 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 CYB561D1Q8N8Q1 229 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 FAM19A4Q96LR4 140 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 ODF3Q96PU9 254 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 ATG101Q9BSB4 218 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 PPP1R14DQ9NXH3 145 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 ZNF492Q9P255 531 aa8.83□□□□□ -1
LINC00539-202ENST00000423575 TRAV12-2A0A075B6T6 113 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 SERTM2A0A1B0GWG4 89 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 SCO2A0A1W2PP80 73 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 C11orf94C9JXX5 98 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 CRXO43186 299 aaPredicted RBP8.82□□□□□ -1
LINC00539-202ENST00000423575 IFNA1P01562 189 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 IGLV2-11P01706 119 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 ZNF138P52744 262 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 KIR3DS1Q14943 382 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 CSNK1G2-AS1Q8NCQ2 148 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 HIST1H2BAQ96A08 127 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 SGK494Q96LW2 274 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 LINC00477Q96M19 166 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 LINC00479Q96M42 142 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 SPATA25Q9BR10 227 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 TCEAL7Q9BRU2 100 aa8.82□□□□□ -1
LINC00539-202ENST00000423575 STAB2Q8WWQ8 2551 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 TRAV34A0A0B4J273 112 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 LOC102723971A0A1B0GUV8 181 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 J3KRW8 73 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 AMBPP02760 352 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 CRISP2P16562 243 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 LEPP41159 167 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 ZFAND2AQ8N6M9 145 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 RNF183Q96D59 192 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 RCHY1Q96PM5 261 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 OVOL2Q9BRP0 275 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 C1QTNF4Q9BXJ3 329 aa8.81□□□□□ -1
LINC00539-202ENST00000423575 COL7A1Q02388 2944 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 K7EQM0 130 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 SPRY2O43597 315 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 RBMY1A1P0DJD3 496 aaKnown RBP8.8□□□□□ -1
LINC00539-202ENST00000423575 RBMY1CP0DJD4 496 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 TSPOP30536 169 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 CDKN1BP46527 198 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 FLI1Q01543 452 aaPredicted RBP8.8□□□□□ -1
LINC00539-202ENST00000423575 MEF2BQ02080 365 aaPredicted RBP8.8□□□□□ -1
LINC00539-202ENST00000423575 RBMY1FQ15415 496 aaKnown RBP8.8□□□□□ -1
LINC00539-202ENST00000423575 PRR9Q5T870 116 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 GFI1BQ5VTD9 330 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 C1orf158Q8N1D5 194 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 TMEM75Q8N9X5 138 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 C2CD4CQ8TF44 421 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 C11orf52Q96A22 123 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 TVP23CQ96ET8 276 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 IGF2BP2-AS1Q96M15 143 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 RARRES2Q99969 163 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 VAX2Q9UIW0 290 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 PSG8Q9UQ74 426 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 TP53TG1Q9Y2A0 90 aa8.8□□□□□ -1
LINC00539-202ENST00000423575 TRBV7-9A0A0J9YWB2 115 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 KLLNB2CW77 178 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 F6UZH7 168 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 INSP01308 110 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 NHLRC4P0CG21 123 aaPredicted RBP8.79□□□□□ -1
LINC00539-202ENST00000423575 AKR1C3P42330 323 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 TOR2AQ5JU69 321 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 ZNF506Q5JVG8 444 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 ZNF767PQ75MW2 155 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 PRNTQ86SH4 94 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 Q86TA4 180 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 TXNDC17Q9BRA2 123 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 ZMAT4Q9H898 229 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 TGP01266 2768 aa8.79□□□□□ -1
LINC00539-202ENST00000423575 C7orf71A4D174 169 aa8.78□□□□□ -1
LINC00539-202ENST00000423575 RBFOX3A6NFN3 312 aa8.78□□□□□ -1
LINC00539-202ENST00000423575 TAGLN2P37802 199 aaKnown RBP8.78□□□□□ -1
LINC00539-202ENST00000423575 BTN1A1Q13410 526 aa8.78□□□□□ -1
LINC00539-202ENST00000423575 ZNF705AQ6ZN79 300 aaPredicted RBP8.78□□□□□ -1
LINC00539-202ENST00000423575 OR11H2Q8NH07 326 aa8.78□□□□□ -1
LINC00539-202ENST00000423575 FAM210AQ96ND0 272 aa8.78□□□□□ -1
LINC00539-202ENST00000423575 KLF12Q9Y4X4 402 aa8.78□□□□□ -1
LINC00539-202ENST00000423575 LENEPQ9Y5L5 61 aa8.78□□□□□ -1
LINC00539-202ENST00000423575 X6R8D5 127 aa8.78□□□□□ -1
LINC00539-202ENST00000423575 IGHV3OR16-12A0A075B7B8 117 aa8.77□□□□□ -1.01
LINC00539-202ENST00000423575 FBLL1A6NHQ2 334 aaKnown RBP8.77□□□□□ -1.01
LINC00539-202ENST00000423575 PDE6DO43924 150 aa8.77□□□□□ -1.01
LINC00539-202ENST00000423575 GPX1P07203 203 aa8.77□□□□□ -1.01
LINC00539-202ENST00000423575 RNASE4P34096 147 aaKnown RBP8.77□□□□□ -1.01
LINC00539-202ENST00000423575 TMEM183BQ1AE95 376 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms