RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 IGHV3OR16-13A0A075B7E8 117 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 IGHV3-74A0A0B4J1X5 117 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 COX6B1P14854 86 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 RNF182Q8N6D2 247 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 PRAC2D3DTV9 90 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 M0R143 59 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 C3orf79P0CE67 100 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 BLCAPP62952 87 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 BATFQ16520 125 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 LINC01356Q8N9X3 169 aa10.6□□□□□ -0.71
CDCA3-202ENST00000422785 IGHV3-49A0A0A0MS15 119 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 M0R2Z0 102 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 ZNF80P51504 273 aaPredicted RBP10.59□□□□□ -0.71
CDCA3-202ENST00000422785 RPS20P60866 119 aaKnown RBP10.59□□□□□ -0.71
CDCA3-202ENST00000422785 RBX1P62877 108 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 TDRG1Q3Y452 100 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 CHCHD1Q96BP2 118 aaKnown RBP10.59□□□□□ -0.71
CDCA3-202ENST00000422785 TPPP3Q9BW30 176 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 UTP20O75691 2785 aaKnown RBP10.59□□□□□ -0.71
CDCA3-202ENST00000422785 ZFYVE26Q68DK2 2539 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 ZNF462Q96JM2 2506 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 TMSB15BA0A087X1C1 80 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 TRAV8-2A0A0B4J237 113 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 SRSF2Q01130 221 aaKnown RBP10.59□□□□□ -0.71
CDCA3-202ENST00000422785 LYZL1Q6UWQ5 148 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 ZNF843Q8N446 348 aa10.59□□□□□ -0.71
CDCA3-202ENST00000422785 MRPL53Q96EL3 112 aaKnown RBP10.59□□□□□ -0.71
CDCA3-202ENST00000422785 A0A096LNT2 108 aa10.58□□□□□ -0.72
CDCA3-202ENST00000422785 ERCC8Q13216 396 aa10.58□□□□□ -0.72
CDCA3-202ENST00000422785 ZNF493Q6ZR52 646 aa10.58□□□□□ -0.72
CDCA3-202ENST00000422785 C8orf86Q6ZUL3 223 aa10.58□□□□□ -0.72
CDCA3-202ENST00000422785 C20orf144Q9BQM9 153 aa10.58□□□□□ -0.72
CDCA3-202ENST00000422785 VAMP8Q9BV40 100 aa10.58□□□□□ -0.72
CDCA3-202ENST00000422785 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.58□□□□□ -0.729e-7■■■□□ 17.4
CDCA3-202ENST00000422785 FAM181BA6NEQ2 426 aa10.58□□□□□ -0.72
CDCA3-202ENST00000422785 NDUFA4O00483 81 aa10.58□□□□□ -0.72
CDCA3-202ENST00000422785 TFPI2P48307 235 aa10.58□□□□□ -0.72
CDCA3-202ENST00000422785 SRSF1Q07955 248 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDCA3-202ENST00000422785 Q6ZS46 218 aa10.57□□□□□ -0.72
CDCA3-202ENST00000422785 GLMPQ8WWB7 406 aa10.57□□□□□ -0.72
CDCA3-202ENST00000422785 FABP5P3A8MUU1 101 aa10.57□□□□□ -0.72
CDCA3-202ENST00000422785 IGLV1-40P01703 118 aa10.57□□□□□ -0.72
CDCA3-202ENST00000422785 TRBV12-3P01733 135 aa10.57□□□□□ -0.72
CDCA3-202ENST00000422785 CLEC5AQ9NY25 188 aa10.57□□□□□ -0.72
CDCA3-202ENST00000422785 CELSR1Q9NYQ6 3014 aa10.57□□□□□ -0.72
CDCA3-202ENST00000422785 LINC00614P0C842 121 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 KLK15Q9H2R5 256 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 CELSR2Q9HCU4 2923 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 ZFHX3Q15911 3703 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 MAP1AP78559 2803 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-202ENST00000422785 J3QLI3 93 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 M0QZ24 198 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 PF4V1P10720 104 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 CTRLP40313 264 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 RNF151Q2KHN1 245 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 UNQ9165/PRO28630Q6UXU0 137 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 ZNF705AQ6ZN79 300 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-202ENST00000422785 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 AGPAT4-IT1Q9H0P7 198 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 ZNF580Q9UK33 172 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 PAM16Q9Y3D7 125 aa10.56□□□□□ -0.72
CDCA3-202ENST00000422785 IGLC6P0CF74 106 aa10.55□□□□□ -0.72
CDCA3-202ENST00000422785 CFHR3Q02985 330 aa10.55□□□□□ -0.72
CDCA3-202ENST00000422785 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
CDCA3-202ENST00000422785 UBR5O95071 2799 aaPredicted RBP10.55□□□□□ -0.72
CDCA3-202ENST00000422785 A0A0G2JLM5 398 aa10.55□□□□□ -0.72
CDCA3-202ENST00000422785 EBLN2Q6P2I7 272 aa10.55□□□□□ -0.72
CDCA3-202ENST00000422785 IL17RELQ6ZVW7 336 aa10.55□□□□□ -0.72
CDCA3-202ENST00000422785 CRYBG3Q68DQ2 2970 aa10.55□□□□□ -0.72
CDCA3-202ENST00000422785 C2orf70A6NJV1 201 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 IGHV3-11P01762 117 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 ORM1P02763 201 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 RPLP1P05386 114 aaKnown RBP10.54□□□□□ -0.72
CDCA3-202ENST00000422785 OR4X2Q8NGF9 303 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 A1L4Q6 167 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 TMEM213A2RRL7 107 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 ZNF138P52744 262 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 LINC01559Q495D7 138 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 TMEM78Q5T7P6 136 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 C9orf47Q6ZRZ4 202 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 C16orf92Q96LL3 132 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 PSMG3-AS1Q96PY0 264 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 IGHV1-24A0A0C4DH33 117 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 SMAD7O15105 426 aaKnown RBP10.54□□□□□ -0.72
CDCA3-202ENST00000422785 DEFB112Q30KQ8 113 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 FAM104BQ5XKR9 115 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 C9orf139Q6ZV77 190 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 MIEN1Q9BRT3 115 aa10.54□□□□□ -0.72
CDCA3-202ENST00000422785 FAM208BQ5VWN6 2430 aa10.53□□□□□ -0.72
CDCA3-202ENST00000422785 LRRK2Q5S007 2527 aa10.53□□□□□ -0.72
CDCA3-202ENST00000422785 ANKRD17O75179 2603 aaKnown RBP10.53□□□□□ -0.72
CDCA3-202ENST00000422785 U3KQK5 164 aa10.53□□□□□ -0.72
CDCA3-202ENST00000422785 TGFAP01135 160 aa10.53□□□□□ -0.72
CDCA3-202ENST00000422785 IGHV4-59P01825 116 aa10.53□□□□□ -0.72
CDCA3-202ENST00000422785 HIST1H1AQ02539 215 aaPredicted RBP10.53□□□□□ -0.72
CDCA3-202ENST00000422785 LOXL1Q08397 574 aaPredicted RBP10.53□□□□□ -0.72
CDCA3-202ENST00000422785 GAGE1Q13065 139 aa10.53□□□□□ -0.72
CDCA3-202ENST00000422785 PMCHL1Q16048 86 aa10.53□□□□□ -0.72
CDCA3-202ENST00000422785 NPFFR1Q9GZQ6 430 aa10.53□□□□□ -0.72
CDCA3-202ENST00000422785 OR5AL1P0C617 328 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms