RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 TMEM78Q5T7P6 136 aa15.54■□□□□ 0.08
TRAF4-204ENST00000422344 TIMM8BQ9Y5J9 83 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-204ENST00000422344 DNAH6Q9C0G6 4158 aa15.54■□□□□ 0.08
TRAF4-204ENST00000422344 A0A1W2PPV4 95 aa15.53■□□□□ 0.08
TRAF4-204ENST00000422344 PLAC8L1A1L4L8 177 aa15.53■□□□□ 0.08
TRAF4-204ENST00000422344 SLC25A5P05141 298 aaKnown RBP15.53■□□□□ 0.08
TRAF4-204ENST00000422344 CSN1S1P47710 185 aa15.53■□□□□ 0.08
TRAF4-204ENST00000422344 PHYHIPLQ96FC7 376 aa15.53■□□□□ 0.08
TRAF4-204ENST00000422344 AGPAT4-IT1Q9H0P7 198 aa15.53■□□□□ 0.08
TRAF4-204ENST00000422344 KIAA1109Q2LD37 5005 aa15.52■□□□□ 0.08
TRAF4-204ENST00000422344 IGKV2-40A0A087WW87 121 aaPredicted RBP15.52■□□□□ 0.08
TRAF4-204ENST00000422344 IGKV2D-40P01614 121 aaPredicted RBP15.52■□□□□ 0.08
TRAF4-204ENST00000422344 M6PRP20645 277 aa15.52■□□□□ 0.08
TRAF4-204ENST00000422344 RANP62826 216 aaKnown RBP15.52■□□□□ 0.08
TRAF4-204ENST00000422344 C9orf47Q6ZRZ4 202 aa15.52■□□□□ 0.08
TRAF4-204ENST00000422344 RNASE8Q8TDE3 154 aaKnown RBP15.52■□□□□ 0.08
TRAF4-204ENST00000422344 AQP10Q96PS8 301 aa15.52■□□□□ 0.08
TRAF4-204ENST00000422344 C7orf71A4D174 169 aa15.51■□□□□ 0.07
TRAF4-204ENST00000422344 LYPD1Q8N2G4 141 aa15.51■□□□□ 0.07
TRAF4-204ENST00000422344 ZNF503Q96F45 646 aa15.51■□□□□ 0.07
TRAF4-204ENST00000422344 PYGO2Q9BRQ0 406 aa15.51■□□□□ 0.07
TRAF4-204ENST00000422344 NOP10Q9NPE3 64 aaKnown RBP15.51■□□□□ 0.07
TRAF4-204ENST00000422344 SNURFLB1AK76 121 aa15.5■□□□□ 0.07
TRAF4-204ENST00000422344 TMEM88Q6PEY1 159 aa15.5■□□□□ 0.07
TRAF4-204ENST00000422344 HSD17B11Q8NBQ5 300 aa15.5■□□□□ 0.07
TRAF4-204ENST00000422344 INO80EQ8NBZ0 244 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-204ENST00000422344 Q9H3A6 140 aa15.5■□□□□ 0.07
TRAF4-204ENST00000422344 ATP5G1P05496 136 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 GPX1P07203 203 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 RNASE4P34096 147 aaKnown RBP15.49■□□□□ 0.07
TRAF4-204ENST00000422344 ATP5G3P48201 142 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 RAB2AP61019 212 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 UBE2DNLQ8IWF7 75 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 OR10G4Q8NGN3 311 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 OR10G9Q8NGN4 311 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 OR10G7Q8NGN6 311 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 FAM19A4Q96LR4 140 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 VGLL1Q99990 258 aa15.49■□□□□ 0.07
TRAF4-204ENST00000422344 CBY3A6NI87 242 aa15.48■□□□□ 0.07
TRAF4-204ENST00000422344 KLLNB2CW77 178 aa15.48■□□□□ 0.07
TRAF4-204ENST00000422344 F5H768 121 aa15.48■□□□□ 0.07
TRAF4-204ENST00000422344 EIF3GO75821 320 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRAF4-204ENST00000422344 BTN1A1Q13410 526 aa15.48■□□□□ 0.07
TRAF4-204ENST00000422344 Q5BKY6 102 aa15.48■□□□□ 0.07
TRAF4-204ENST00000422344 PQLC2Q6ZP29 291 aa15.48■□□□□ 0.07
TRAF4-204ENST00000422344 POM121L12Q8N7R1 296 aa15.48■□□□□ 0.07
TRAF4-204ENST00000422344 ZNF492Q9P255 531 aa15.48■□□□□ 0.07
TRAF4-204ENST00000422344 FXYD6-FXYD2A0A087WZ82 144 aa15.47■□□□□ 0.07
TRAF4-204ENST00000422344 NMBP08949 121 aa15.47■□□□□ 0.07
TRAF4-204ENST00000422344 CRISP2P16562 243 aa15.47■□□□□ 0.07
TRAF4-204ENST00000422344 ZNF138P52744 262 aa15.47■□□□□ 0.07
TRAF4-204ENST00000422344 CD300CQ08708 224 aa15.47■□□□□ 0.07
TRAF4-204ENST00000422344 FAM74A1Q5RGS3 127 aa15.47■□□□□ 0.07
TRAF4-204ENST00000422344 RXFP4Q8TDU9 374 aa15.47■□□□□ 0.07
TRAF4-204ENST00000422344 C15orf53Q8NAA6 179 aa15.46■□□□□ 0.07
TRAF4-204ENST00000422344 ZNF680Q8NEM1 530 aa15.46■□□□□ 0.07
TRAF4-204ENST00000422344 OR2T35Q8NGX2 323 aa15.46■□□□□ 0.07
TRAF4-204ENST00000422344 CMTM2Q8TAZ6 248 aa15.46■□□□□ 0.07
TRAF4-204ENST00000422344 HYLS1Q96M11 299 aa15.46■□□□□ 0.07
TRAF4-204ENST00000422344 PSMG3Q9BT73 122 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-204ENST00000422344 RYR1P21817 5038 aa15.45■□□□□ 0.06
TRAF4-204ENST00000422344 RBAKDNA6NC62 111 aa15.45■□□□□ 0.06
TRAF4-204ENST00000422344 CDC34P49427 236 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-204ENST00000422344 OR2G3Q8NGZ4 309 aa15.45■□□□□ 0.06
TRAF4-204ENST00000422344 Q8TAT8 98 aa15.45■□□□□ 0.06
TRAF4-204ENST00000422344 OTORQ9NRC9 128 aa15.45■□□□□ 0.06
TRAF4-204ENST00000422344 RGS13O14921 159 aa15.44■□□□□ 0.06
TRAF4-204ENST00000422344 HMGB3O15347 200 aaKnown RBP15.44■□□□□ 0.06
TRAF4-204ENST00000422344 MBP02144 154 aa15.44■□□□□ 0.06
TRAF4-204ENST00000422344 ATP6V0CP27449 155 aa15.44■□□□□ 0.06
TRAF4-204ENST00000422344 EIF4E3Q8N5X7 224 aaKnown RBP15.44■□□□□ 0.06
TRAF4-204ENST00000422344 ZFAND2AQ8N6M9 145 aa15.44■□□□□ 0.06
TRAF4-204ENST00000422344 RPH3ALQ9UNE2 315 aa15.44■□□□□ 0.06
TRAF4-204ENST00000422344 BORCS7-ASMTA0A0B4J1R7 106 aa15.43■□□□□ 0.06
TRAF4-204ENST00000422344 TRBV7-9A0A0J9YWB2 115 aa15.43■□□□□ 0.06
TRAF4-204ENST00000422344 PGPA6NDG6 321 aa15.43■□□□□ 0.06
TRAF4-204ENST00000422344 DIRC3C9JPN6 131 aa15.43■□□□□ 0.06
TRAF4-204ENST00000422344 ZNF324O75467 553 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-204ENST00000422344 LINC00467Q9BRT7 94 aa15.43■□□□□ 0.06
TRAF4-204ENST00000422344 TNFSF18Q9UNG2 199 aa15.43■□□□□ 0.06
TRAF4-204ENST00000422344 GAGE12BA1L429 117 aa15.42■□□□□ 0.06
TRAF4-204ENST00000422344 GAGE7O76087 117 aa15.42■□□□□ 0.06
TRAF4-204ENST00000422344 GAGE12FP0CL80 117 aa15.42■□□□□ 0.06
TRAF4-204ENST00000422344 GAGE12GP0CL81 117 aa15.42■□□□□ 0.06
TRAF4-204ENST00000422344 GAGE12IP0CL82 117 aa15.42■□□□□ 0.06
TRAF4-204ENST00000422344 SERF2P84101 59 aa15.42■□□□□ 0.06
TRAF4-204ENST00000422344 ARL14EPLP0DKL9 152 aa15.41■□□□□ 0.06
TRAF4-204ENST00000422344 DAZ2Q13117 558 aaKnown RBP15.41■□□□□ 0.06
TRAF4-204ENST00000422344 ANXA2RQ3ZCQ2 193 aa15.41■□□□□ 0.06
TRAF4-204ENST00000422344 PRR9Q5T870 116 aa15.41■□□□□ 0.06
TRAF4-204ENST00000422344 GNPNAT1Q96EK6 184 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-204ENST00000422344 SH3BGRL3Q9H299 93 aa15.41■□□□□ 0.06
TRAF4-204ENST00000422344 GSN-AS1Q9NRJ2 163 aa15.41■□□□□ 0.06
TRAF4-204ENST00000422344 RNF222A6NCQ9 220 aa15.4■□□□□ 0.06
TRAF4-204ENST00000422344 NUDT3O95989 172 aa15.4■□□□□ 0.06
TRAF4-204ENST00000422344 RNF212Q495C1 297 aa15.4■□□□□ 0.06
TRAF4-204ENST00000422344 RPL7L1Q6DKI1 246 aaKnown RBP15.4■□□□□ 0.06
TRAF4-204ENST00000422344 LINC00612Q8N6U2 182 aa15.4■□□□□ 0.06
TRAF4-204ENST00000422344 RAB24Q969Q5 203 aa15.4■□□□□ 0.06
TRAF4-204ENST00000422344 ARPC5LQ9BPX5 153 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms