RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 ZNF846Q147U1 533 aa12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 LYRM2Q9NU23 88 aaPredicted RBP12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 FUT9Q9Y231 359 aa12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 PRELID1Q9Y255 219 aa12.76□□□□□ -0.37
AC004540.1-203ENST00000421862 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
AC004540.1-203ENST00000421862 FAM24AA6NFZ4 105 aa12.75□□□□□ -0.37
AC004540.1-203ENST00000421862 SIVA1O15304 175 aa12.75□□□□□ -0.37
AC004540.1-203ENST00000421862 SULT1A1P50225 295 aa12.75□□□□□ -0.37
AC004540.1-203ENST00000421862 BCAP31P51572 246 aa12.75□□□□□ -0.37
AC004540.1-203ENST00000421862 C12orf45Q8N5I9 185 aaPredicted RBP12.75□□□□□ -0.37
AC004540.1-203ENST00000421862 LINC00477Q96M19 166 aa12.75□□□□□ -0.37
AC004540.1-203ENST00000421862 PLA2G10O15496 165 aa12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 NMBP08949 121 aa12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 HIST1H1EP10412 219 aaKnown RBP12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 BAXQ07812 192 aa12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 IL15RAQ13261 267 aa12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 C9orf47Q6ZRZ4 202 aa12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 ZFAND2AQ8N6M9 145 aa12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 ST6GAL2Q96JF0 529 aa12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 KLF12Q9Y4X4 402 aa12.74□□□□□ -0.37
AC004540.1-203ENST00000421862 IGSF23A1L1A6 192 aa12.73□□□□□ -0.37
AC004540.1-203ENST00000421862 PYYP10082 97 aa12.73□□□□□ -0.37
AC004540.1-203ENST00000421862 S100A11P31949 105 aa12.73□□□□□ -0.37
AC004540.1-203ENST00000421862 PRR9Q5T870 116 aa12.73□□□□□ -0.37
AC004540.1-203ENST00000421862 VGLL1Q99990 258 aa12.73□□□□□ -0.37
AC004540.1-203ENST00000421862 ICOSQ9Y6W8 199 aa12.73□□□□□ -0.37
AC004540.1-203ENST00000421862 FAM25EA8MYX2 175 aa12.72□□□□□ -0.37
AC004540.1-203ENST00000421862 LYRM1O43325 122 aa12.72□□□□□ -0.37
AC004540.1-203ENST00000421862 MPDU1O75352 247 aa12.72□□□□□ -0.37
AC004540.1-203ENST00000421862 NXPH4O95158 308 aa12.72□□□□□ -0.37
AC004540.1-203ENST00000421862 PVALBP20472 110 aaPredicted RBP12.72□□□□□ -0.37
AC004540.1-203ENST00000421862 CDPF1Q6NVV7 123 aa12.72□□□□□ -0.37
AC004540.1-203ENST00000421862 TMEM252Q8N6L7 170 aa12.72□□□□□ -0.37
AC004540.1-203ENST00000421862 C2orf50Q96LR7 162 aa12.72□□□□□ -0.37
AC004540.1-203ENST00000421862 SEC22CQ9BRL7 303 aa12.72□□□□□ -0.37
AC004540.1-203ENST00000421862 TCRBP04435 133 aa12.71□□□□□ -0.37
AC004540.1-203ENST00000421862 HBG1P69891 147 aa12.71□□□□□ -0.37
AC004540.1-203ENST00000421862 HBG2P69892 147 aa12.71□□□□□ -0.37
AC004540.1-203ENST00000421862 STX12Q86Y82 276 aa12.71□□□□□ -0.37
AC004540.1-203ENST00000421862 EXOC3-AS1Q8N2X6 119 aa12.71□□□□□ -0.37
AC004540.1-203ENST00000421862 SLC25A2Q9BXI2 301 aa12.71□□□□□ -0.37
AC004540.1-203ENST00000421862 VPS13BQ7Z7G8 4022 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 C5orf51A6NDU8 294 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 PAX4O43316 350 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 FGF7P21781 194 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 RNASE4P34096 147 aaKnown RBP12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 FAM167A-AS1Q96KT0 104 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 NPCDR1Q9BY65 106 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 NUDT15Q9NV35 164 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 PRO0255Q9UI72 69 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 TP53TG3Q9ULZ0 132 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 TIMM9Q9Y5J7 89 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 FAT1Q14517 4588 aa12.7□□□□□ -0.38
AC004540.1-203ENST00000421862 TRAV6A0A075B6T7 132 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 TRBV7-9A0A0J9YWB2 115 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 GPX1P07203 203 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 CRYBA4P53673 196 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 ERVFC1-1P60608 527 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 S100A10P60903 97 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 RAB32Q13637 225 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 ATP6V1FQ16864 119 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 GCSAMLQ5JQS6 135 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 AAMDCQ9H7C9 122 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 MRPL16Q9NX20 251 aaKnown RBP12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 PGPEP1Q9NXJ5 209 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 ZNF492Q9P255 531 aa12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 DMBT1Q9UGM3 2413 aaPredicted RBP12.69□□□□□ -0.38
AC004540.1-203ENST00000421862 IGHV1OR15-1A0A075B7D0 117 aa12.68□□□□□ -0.38
AC004540.1-203ENST00000421862 EPM2AB3EWF7 344 aa12.68□□□□□ -0.38
AC004540.1-203ENST00000421862 RGS13O14921 159 aa12.68□□□□□ -0.38
AC004540.1-203ENST00000421862 SLAQ13239 276 aa12.68□□□□□ -0.38
AC004540.1-203ENST00000421862 ICAM4Q14773 271 aa12.68□□□□□ -0.38
AC004540.1-203ENST00000421862 TMEM78Q5T7P6 136 aa12.68□□□□□ -0.38
AC004540.1-203ENST00000421862 Q6ZQT7 251 aa12.68□□□□□ -0.38
AC004540.1-203ENST00000421862 BLNKQ8WV28 456 aa12.68□□□□□ -0.38
AC004540.1-203ENST00000421862 FHL2Q14192 279 aa12.67□□□□□ -0.38
AC004540.1-203ENST00000421862 LYPD5Q6UWN5 251 aa12.67□□□□□ -0.38
AC004540.1-203ENST00000421862 LYPD1Q8N2G4 141 aa12.67□□□□□ -0.38
AC004540.1-203ENST00000421862 IGHV3-53P01767 116 aa12.66□□□□□ -0.38
AC004540.1-203ENST00000421862 XGP55808 180 aa12.66□□□□□ -0.38
AC004540.1-203ENST00000421862 ZNF415Q09FC8 603 aa12.66□□□□□ -0.38
AC004540.1-203ENST00000421862 MRPL23Q16540 153 aaKnown RBP12.66□□□□□ -0.38
AC004540.1-203ENST00000421862 FAM122CQ6P4D5 195 aa12.66□□□□□ -0.38
AC004540.1-203ENST00000421862 NFE4Q86UQ8 179 aa12.66□□□□□ -0.38
AC004540.1-203ENST00000421862 ARPC5LQ9BPX5 153 aa12.66□□□□□ -0.38
AC004540.1-203ENST00000421862 GPN1Q9HCN4 374 aaPredicted RBP12.66□□□□□ -0.38
AC004540.1-203ENST00000421862 EREGO14944 169 aa12.65□□□□□ -0.38
AC004540.1-203ENST00000421862 MIR17HGQ75NE6 70 aa12.65□□□□□ -0.38
AC004540.1-203ENST00000421862 FXYD5Q96DB9 178 aa12.65□□□□□ -0.38
AC004540.1-203ENST00000421862 PTTG2Q9NZH5 202 aa12.65□□□□□ -0.38
AC004540.1-203ENST00000421862 HHLA3Q9XRX5 114 aa12.65□□□□□ -0.38
AC004540.1-203ENST00000421862 TNFRSF18Q9Y5U5 241 aa12.65□□□□□ -0.38
AC004540.1-203ENST00000421862 MYCBP2O75592 4640 aa12.64□□□□□ -0.39
AC004540.1-203ENST00000421862 A0A087WTM6 91 aa12.64□□□□□ -0.39
AC004540.1-203ENST00000421862 K7EP13 123 aa12.64□□□□□ -0.39
AC004540.1-203ENST00000421862 NBEAP1P0C6P0 100 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms