RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 SMAD5-AS1Q9Y6J3 95 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 AGRNO00468 2067 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 IGHV4-61A0A0C4DH41 118 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 CBY3A6NI87 242 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 M0R1W7 72 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 IGKV3-20P01619 116 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 IGHV4-38-2P0DP08 117 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 PF4V1P10720 104 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 ATP5J2P56134 94 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 Q6ZS46 218 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 WIPF2Q8TF74 440 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-213ENST00000421756 TMEM208Q9BTX3 173 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 USP24Q9UPU5 2620 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 TRAV26-2A0A0B4J265 109 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 C2orf70A6NJV1 201 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 ODF3BA8MYP8 253 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 TRGV3P03979 118 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 IGF1P05019 195 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 EFNA4P52798 201 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 PLP1P60201 277 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 FBXL19-AS1Q494R0 122 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 DNLZQ5SXM8 178 aa10.37□□□□□ -0.75
MCF2L-213ENST00000421756 NAA38Q9BRA0 125 aaKnown RBP10.37□□□□□ -0.75
MCF2L-213ENST00000421756 NDUFA3O95167 84 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 IGHV4-39P01824 125 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 ESDP10768 282 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 BLCAPP62952 87 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 C20orf144Q9BQM9 153 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 F6UB75 175 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 TM4SF20Q53R12 229 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 NPFFO15130 113 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 NPBQ8NG41 125 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 ITLN2Q8WWU7 325 aaPredicted RBP10.36□□□□□ -0.75
MCF2L-213ENST00000421756 KLK15Q9H2R5 256 aa10.36□□□□□ -0.75
MCF2L-213ENST00000421756 IGHV2-70DA0A0C4DH43 119 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 CENPVL3A0A0U1RRI6 287 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 HSBP1L1C9JCN9 74 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 SYS1-DBNDD2H3BUS1 97 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 PRELID3AQ96N28 172 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 PRR25Q96S07 402 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 A0A087X0K7 114 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 LMO4P61968 165 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 FOXE3Q13461 319 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 MPV17L2Q567V2 206 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 FAM162BQ5T6X4 162 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 PRSS57Q6UWY2 283 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 MAP1LC3CQ9BXW4 147 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 SIRPDQ9H106 197 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 H3BUX3 64 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 TSPOP30536 169 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 TMEM14CQ9P0S9 112 aa10.35□□□□□ -0.75
MCF2L-213ENST00000421756 TRAV9-2A0A087WT02 112 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 WI2-2373I1.2A0A1W2PRP0 233 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 GOSR1O95249 250 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 NUDT3O95989 172 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 C21orf62-AS1Q17RA5 79 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 KLHDC1Q8N7A1 406 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 C16orf92Q96LL3 132 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 RNF5Q99942 180 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 HIVEP2P31629 2446 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 TRAV30A0A087WSZ9 112 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 ATP5L2Q7Z4Y8 100 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 FER1L6-AS1Q8NA97 138 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 ZFP30Q9Y2G7 519 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 TTC9CQ8N5M4 171 aa10.34□□□□□ -0.75
MCF2L-213ENST00000421756 EDN2P20800 178 aa10.33□□□□□ -0.76
MCF2L-213ENST00000421756 KIR3DS1Q14943 382 aa10.33□□□□□ -0.76
MCF2L-213ENST00000421756 UNQ9165/PRO28630Q6UXU0 137 aa10.33□□□□□ -0.76
MCF2L-213ENST00000421756 NPYP01303 97 aa10.33□□□□□ -0.76
MCF2L-213ENST00000421756 CCDC140Q96MF4 163 aa10.33□□□□□ -0.76
MCF2L-213ENST00000421756 MRPS12O15235 138 aaKnown RBP10.32□□□□□ -0.76
MCF2L-213ENST00000421756 CCL19Q99731 98 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 ZNF492Q9P255 531 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 GOLT1BQ9Y3E0 138 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 C20orf202A1L168 122 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 UBE2E1P51965 193 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 CACNG7P62955 275 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 ZNF124Q15973 351 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 COL5A1-AS1Q5SY13 56 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 ZNF738Q8NE65 137 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 NDFIP1Q9BT67 221 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 TTTY13Q9BZ97 58 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 IGHV4-30-2A0A087WSY4 118 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 M0R381 172 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 CTRLP40313 264 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 NMUP48645 174 aa10.32□□□□□ -0.76
MCF2L-213ENST00000421756 MRPL51Q4U2R6 128 aaKnown RBP10.31□□□□□ -0.76
MCF2L-213ENST00000421756 C10orf99Q6UWK7 81 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 SIGLEC8Q9NYZ4 499 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 CHD6Q8TD26 2715 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 ATP5G2Q06055 141 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 DTX2Q86UW9 622 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 FN1P02751 2386 aaKnown RBP10.31□□□□□ -0.76
MCF2L-213ENST00000421756 HTN1P15515 57 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 PSG9Q00887 426 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 VAMP3Q15836 100 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
MCF2L-213ENST00000421756 METTL26Q96S19 204 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms