RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 RPP25LQ8N5L8 163 aaKnown RBP9.04□□□□□ -0.96
PTCH1-205ENST00000418258 C8orf49Q96NF6 230 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 RHODO00212 210 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 ATRAIDQ6UW56 229 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 ANGP03950 147 aaKnown RBP9.03□□□□□ -0.96
PTCH1-205ENST00000418258 NMSQ5H8A3 153 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 TNFRSF6BO95407 300 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 KLHDC3Q9BQ90 382 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 TMEM243Q9BU79 118 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 TSSC4Q9Y5U2 329 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-205ENST00000418258 TRAV25A0A0B4J276 109 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 hDV102S1A0JD36 115 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 I3L3M4 83 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 NDUFB8O95169 186 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 SHANK2-AS3Q9BTD1 123 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 MUC6Q6W4X9 2439 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 OCIAD2Q56VL3 154 aa9.03□□□□□ -0.96
PTCH1-205ENST00000418258 C15orf62A8K5M9 175 aa9.02□□□□□ -0.96
PTCH1-205ENST00000418258 CDKN1BP46527 198 aa9.02□□□□□ -0.96
PTCH1-205ENST00000418258 GAGE2AQ6NT46 116 aa9.02□□□□□ -0.96
PTCH1-205ENST00000418258 TMEM14EPQ6UXP3 125 aa9.02□□□□□ -0.96
PTCH1-205ENST00000418258 KIAA1549LQ6ZVL6 1849 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 PRR14LQ5THK1 2151 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 LINC01551Q86U37 167 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 TMEM75Q8N9X5 138 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 DSCAML1Q8TD84 2053 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 TRBV6-6A0A0A6YYG2 114 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 IGHV3-38A0A0C4DH36 116 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 ZNRF2Q8NHG8 242 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 SIGMAR1Q99720 223 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 ZNF581Q9P0T4 197 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 LHFPL1Q86WI0 220 aa9.02□□□□□ -0.97
PTCH1-205ENST00000418258 A0A087X0K7 114 aa9.01□□□□□ -0.97
PTCH1-205ENST00000418258 HCFC1P51610 2035 aa9.01□□□□□ -0.97
PTCH1-205ENST00000418258 TP53TG1Q9Y2A0 90 aa9.01□□□□□ -0.97
PTCH1-205ENST00000418258 ZFAND6Q6FIF0 208 aa9.01□□□□□ -0.97
PTCH1-205ENST00000418258 TMEM242Q9NWH2 141 aa9.01□□□□□ -0.97
PTCH1-205ENST00000418258 FNDC10F2Z333 226 aa9.01□□□□□ -0.97
PTCH1-205ENST00000418258 UBE2BP63146 152 aa9.01□□□□□ -0.97
PTCH1-205ENST00000418258 KLF5Q13887 457 aaPredicted RBP9.01□□□□□ -0.97
PTCH1-205ENST00000418258 LINC00479Q96M42 142 aa9.01□□□□□ -0.97
PTCH1-205ENST00000418258 IGKV2D-24A0A075B6R9 120 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 CCL24O00175 119 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 NAA38Q9BRA0 125 aaKnown RBP9□□□□□ -0.97
PTCH1-205ENST00000418258 IGHV1OR15-1A0A075B7D0 117 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 IGFL3Q6UXB1 125 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 Q86TA4 180 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 HS3ST6Q96QI5 342 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 Q9HAA7 133 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 TMEM14BQ9NUH8 114 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 NDUFA4O00483 81 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 MMP23AO75900 390 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 CXCL1P09341 107 aa9□□□□□ -0.97
PTCH1-205ENST00000418258 GAGE2BQ13066 116 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 RNF144BQ7Z419 303 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 SORL1Q92673 2214 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 HIST1H2BLQ99880 126 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 NXPH4O95158 308 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 IGKV1-39P01597 117 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 IGKV1D-39P04432 117 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 PFN1P07737 140 aaKnown RBP8.99□□□□□ -0.97
PTCH1-205ENST00000418258 TAL2Q16559 108 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 TRAV1-1A0A0B4J248 108 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 PRB1P04280 392 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 TEX36Q5VZQ5 186 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 IGKV1OR2-108A0A075B7D4 117 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 PRSS29PA6NIE9 313 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 ZNF833PQ6ZTB9 187 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 CITED2Q99967 270 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-205ENST00000418258 CHAC1Q9BUX1 264 aa8.99□□□□□ -0.97
PTCH1-205ENST00000418258 OTOGLQ3ZCN5 2332 aa8.98□□□□□ -0.97
PTCH1-205ENST00000418258 NDUFS5O43920 106 aa8.98□□□□□ -0.97
PTCH1-205ENST00000418258 H3BMM0 161 aa8.98□□□□□ -0.97
PTCH1-205ENST00000418258 SYS1-DBNDD2H3BUS1 97 aa8.98□□□□□ -0.97
PTCH1-205ENST00000418258 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-205ENST00000418258 HLA-DRB4P13762 266 aa8.98□□□□□ -0.97
PTCH1-205ENST00000418258 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
PTCH1-205ENST00000418258 HLA-DRB4X5D2U9 266 aa8.98□□□□□ -0.97
PTCH1-205ENST00000418258 CD5LO43866 347 aa8.98□□□□□ -0.97
PTCH1-205ENST00000418258 A0A0J9YY99 117 aa8.98□□□□□ -0.97
PTCH1-205ENST00000418258 DSCR8Q96T75 97 aa8.98□□□□□ -0.97
PTCH1-205ENST00000418258 ZC2HC1BQ5TFG8 222 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 TMEM256Q8N2U0 113 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 SCRT2Q9NQ03 307 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 UBE2WQ96B02 151 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 PCNX3Q9H6A9 2034 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 NDUFA4L2Q9NRX3 87 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 YPEL3P61236 119 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-205ENST00000418258 FAM120AOSQ5T036 256 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 SPG11Q96JI7 2443 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 GPR179Q6PRD1 2367 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 IGLV2-23P01705 113 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 C1orf194Q5T5A4 169 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 Q8TCH9 128 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 GFRA4Q9GZZ7 299 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 VPREB3Q9UKI3 123 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 C9JAW5 83 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 TMEM141Q96I45 108 aa8.97□□□□□ -0.97
PTCH1-205ENST00000418258 MRPL27Q9P0M9 148 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms