RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 URB1O60287 2271 aaKnown RBP6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 ZNF318Q5VUA4 2279 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 PRRC2CQ9Y520 2896 aaKnown RBP6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 A0A087WX48 190 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 CEACAM4O75871 244 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 Q8N8P6 123 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 CNEP1R1Q8N9A8 125 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 PTH2Q96A98 100 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 RASL11BQ9BPW5 248 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 FAM110AQ9BQ89 295 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 CNFNQ9BYD5 112 aa6.28□□□□□ -1.4
HMGXB4-202ENST00000418170 IGLV2-18A0A075B6J9 118 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 MYMXA0A1B0GTQ4 84 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 MRPS12O15235 138 aaKnown RBP6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 NHLRC4P0CG21 123 aaPredicted RBP6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 APELAP0DMC3 54 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 RPL27AP46776 148 aaKnown RBP6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 PMS2CLQ68D20 193 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 TEX29Q8N6K0 151 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 MSRB1Q9NZV6 116 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 TRBV7-9A0A0J9YWB2 115 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 UBE2D3P61077 147 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 UBE2D2P62837 147 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 CITED1Q99966 193 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 AHCTF1Q8WYP5 2266 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 CACNA1GO43497 2377 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 IGKV1-17P01599 117 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 ZNF688P0C7X2 276 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 PSMB2P49721 201 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 PLGLAQ15195 96 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 ZNF575Q86XF7 245 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 CADP27708 2225 aa6.27□□□□□ -1.41
HMGXB4-202ENST00000418170 A0A1W2PNU3 283 aaPredicted RBP6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 SRD5A1P18405 259 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 UBE2D1P51668 147 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 MYOZ3Q8TDC0 251 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 LINC01549A6NIU2 74 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 FAM90A27PA6NNH2 459 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 CCL3L1P16619 93 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 PDE6HQ13956 83 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 ZFP2Q6ZN57 461 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 SBSPONQ8IVN8 264 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 AAMDCQ9H7C9 122 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 TMEM262E9PQX1 116 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 NDUFA3O95167 84 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 WT1P19544 449 aaPredicted RBP6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 PRR25Q96S07 402 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 LOC107984156A0A0G2JMH3 177 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 LINC01548A6NM66 108 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 I3L2K1 104 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 CD40P25942 277 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 CXCL12P48061 93 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 LYRM7Q5U5X0 104 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 ARL17AQ8IVW1 177 aa6.26□□□□□ -1.41
HMGXB4-202ENST00000418170 LGALS1P09382 135 aaKnown RBP6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 GATA1P15976 413 aaPredicted RBP6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 ZNF80P51504 273 aaPredicted RBP6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 SRSF2Q01130 221 aaKnown RBP6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 LINC00311Q8N616 119 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 TMEM105Q8N8V8 129 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 PSMG3-AS1Q96PY0 264 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 PATE3B3GLJ2 98 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 F8VRH5 84 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 RHODO00212 210 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 HERV-K104P63124 156 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 C8orf31Q8N9H6 132 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 LAGE3Q14657 143 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 PROCRQ9UNN8 238 aa6.25□□□□□ -1.41
HMGXB4-202ENST00000418170 IGLV3-9A0A075B6K5 115 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 TEX22C9J3V5 150 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 H7C1H1 209 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 CFIP05156 583 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 TEX36Q5VZQ5 186 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 ZNF491Q8N8L2 437 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 SPRY4Q9C004 299 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 SIT1Q9Y3P8 196 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 ICE1Q9Y2F5 2266 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 IGKV2-40A0A087WW87 121 aaPredicted RBP6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 TRAV12-1A0A0B4J245 112 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 A8MWV9 139 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 IGKV2D-40P01614 121 aaPredicted RBP6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 CRYGBP07316 175 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 GLRXP35754 106 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 TNFAIP6P98066 277 aaPredicted RBP6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 DTX2Q86UW9 622 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 RNF125Q96EQ8 232 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 SLC25A15Q9Y619 301 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 ADGRG4Q8IZF6 3080 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 TRBV20-1A0A075B6N2 111 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 ENSAO43768 121 aaKnown RBP6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 RPL32P62910 135 aaKnown RBP6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 TMEM78Q5T7P6 136 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 TMEM200BQ69YZ2 307 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 SFTA2Q6UW10 78 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 DEFB123Q8N688 67 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 KIR2DL4Q99706 377 aa6.24□□□□□ -1.41
HMGXB4-202ENST00000418170 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 GAGE7O76087 117 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 TCL1BO95988 128 aa6.23□□□□□ -1.41
HMGXB4-202ENST00000418170 GAGE12FP0CL80 117 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms