RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 Q6ZSV7 163 aa12.77□□□□□ -0.36
SSBP3-205ENST00000417664 MRPL18Q9H0U6 180 aaKnown RBP12.77□□□□□ -0.36
SSBP3-205ENST00000417664 CRIP1P50238 77 aa12.77□□□□□ -0.37
SSBP3-205ENST00000417664 TMEM78Q5T7P6 136 aa12.77□□□□□ -0.37
SSBP3-205ENST00000417664 TMEM136Q6ZRR5 245 aa12.77□□□□□ -0.37
SSBP3-205ENST00000417664 C8orf49Q96NF6 230 aa12.77□□□□□ -0.37
SSBP3-205ENST00000417664 LENEPQ9Y5L5 61 aa12.77□□□□□ -0.37
SSBP3-205ENST00000417664 SRSF2Q01130 221 aaKnown RBP12.76□□□□□ -0.37
SSBP3-205ENST00000417664 MRPL54Q6P161 138 aaKnown RBP12.76□□□□□ -0.37
SSBP3-205ENST00000417664 TMEM213A2RRL7 107 aa12.75□□□□□ -0.37
SSBP3-205ENST00000417664 PRAC2D3DTV9 90 aa12.75□□□□□ -0.37
SSBP3-205ENST00000417664 OVOL1O14753 267 aa12.75□□□□□ -0.37
SSBP3-205ENST00000417664 SPINK4O60575 86 aa12.75□□□□□ -0.37
SSBP3-205ENST00000417664 RNASE1P07998 156 aaKnown RBP12.75□□□□□ -0.37
SSBP3-205ENST00000417664 ZNF138P52744 262 aa12.75□□□□□ -0.37
SSBP3-205ENST00000417664 RPS20P60866 119 aaKnown RBP12.75□□□□□ -0.37
SSBP3-205ENST00000417664 ZNF418Q8TF45 676 aaPredicted RBP12.75□□□□□ -0.37
SSBP3-205ENST00000417664 C4orf3Q8WVX3 66 aa12.75□□□□□ -0.37
SSBP3-205ENST00000417664 GTSF1Q8WW33 167 aa12.75□□□□□ -0.37
SSBP3-205ENST00000417664 ESM1Q9NQ30 184 aa12.75□□□□□ -0.37
SSBP3-205ENST00000417664 IGHV4OR15-8A0A075B7B6 117 aa12.74□□□□□ -0.37
SSBP3-205ENST00000417664 A0A087WW49 117 aa12.74□□□□□ -0.37
SSBP3-205ENST00000417664 A0A1B0GXF2 115 aa12.74□□□□□ -0.37
SSBP3-205ENST00000417664 RPL11P62913 178 aaKnown RBP12.74□□□□□ -0.37
SSBP3-205ENST00000417664 TCF24Q7RTU0 167 aa12.74□□□□□ -0.37
SSBP3-205ENST00000417664 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
SSBP3-205ENST00000417664 FABP5P3A8MUU1 101 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 SH2D1AO60880 128 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 SRD5A1P18405 259 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 HOXD3P31249 432 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-205ENST00000417664 ID1P41134 155 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 HBBP68871 147 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 HIST3H2BBQ8N257 126 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 ZNF738Q8NE65 137 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 Q8TAT8 98 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 LINC00477Q96M19 166 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 ASCL2Q99929 193 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 RAB4BP61018 213 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 ERCC8Q13216 396 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 KLF5Q13887 457 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-205ENST00000417664 Q71RC1 249 aaPredicted RBP12.73□□□□□ -0.37
SSBP3-205ENST00000417664 C16orf95Q9H693 158 aa12.73□□□□□ -0.37
SSBP3-205ENST00000417664 SONP18583 2426 aaKnown RBP12.73□□□□□ -0.37
SSBP3-205ENST00000417664 A0A1B0GW15 77 aa12.72□□□□□ -0.37
SSBP3-205ENST00000417664 TMEM189A5PLL7 270 aa12.72□□□□□ -0.37
SSBP3-205ENST00000417664 FRMD6-AS1P0C7T7 363 aa12.72□□□□□ -0.37
SSBP3-205ENST00000417664 SYNJ2BPP57105 145 aa12.72□□□□□ -0.37
SSBP3-205ENST00000417664 OR10J6PQ8NGY7 276 aa12.72□□□□□ -0.37
SSBP3-205ENST00000417664 GPR61Q9BZJ8 451 aa12.72□□□□□ -0.37
SSBP3-205ENST00000417664 TRBV7-9A0A0J9YWB2 115 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 LINC01619G3V211 115 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 M0QZ24 198 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 HAX1O00165 279 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 APCSP02743 223 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 CRISP2P16562 243 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 S100A2P29034 98 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 PGLYRP4Q96LB8 373 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 C20orf173Q96LM9 149 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 JMJD8Q96S16 334 aa12.71□□□□□ -0.37
SSBP3-205ENST00000417664 FASNP49327 2511 aaKnown RBP12.71□□□□□ -0.37
SSBP3-205ENST00000417664 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-205ENST00000417664 HILS1P60008 231 aa12.7□□□□□ -0.38
SSBP3-205ENST00000417664 HIST1H1AQ02539 215 aaPredicted RBP12.7□□□□□ -0.38
SSBP3-205ENST00000417664 LINC00518Q8N0U6 118 aa12.7□□□□□ -0.38
SSBP3-205ENST00000417664 DCANP1Q8TF63 244 aa12.7□□□□□ -0.38
SSBP3-205ENST00000417664 A0A1B0GUT8 65 aa12.7□□□□□ -0.38
SSBP3-205ENST00000417664 Q0VG73 95 aa12.7□□□□□ -0.38
SSBP3-205ENST00000417664 RIGQ13278 110 aa12.7□□□□□ -0.38
SSBP3-205ENST00000417664 TCTEX1D4Q5JR98 221 aa12.7□□□□□ -0.38
SSBP3-205ENST00000417664 DPF1Q92782 380 aa12.7□□□□□ -0.38
SSBP3-205ENST00000417664 BORCS7Q96B45 105 aa12.7□□□□□ -0.38
SSBP3-205ENST00000417664 C2orf70A6NJV1 201 aa12.69□□□□□ -0.38
SSBP3-205ENST00000417664 ZNF80P51504 273 aaPredicted RBP12.69□□□□□ -0.38
SSBP3-205ENST00000417664 GFI1BQ5VTD9 330 aa12.69□□□□□ -0.38
SSBP3-205ENST00000417664 PEMTQ9UBM1 199 aa12.69□□□□□ -0.38
SSBP3-205ENST00000417664 MYO9AB2RTY4 2548 aa12.69□□□□□ -0.38
SSBP3-205ENST00000417664 ACANP16112 2415 aa12.68□□□□□ -0.38
SSBP3-205ENST00000417664 IFITM10A6NMD0 228 aa12.68□□□□□ -0.38
SSBP3-205ENST00000417664 SMIM6P0DI80 62 aa12.68□□□□□ -0.38
SSBP3-205ENST00000417664 GZMBP10144 247 aa12.68□□□□□ -0.38
SSBP3-205ENST00000417664 CAMPP49913 170 aa12.68□□□□□ -0.38
SSBP3-205ENST00000417664 LINC01559Q495D7 138 aa12.68□□□□□ -0.38
SSBP3-205ENST00000417664 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
SSBP3-205ENST00000417664 AKAP9Q99996 3911 aa12.68□□□□□ -0.38
SSBP3-205ENST00000417664 HECTD1Q9ULT8 2610 aa12.68□□□□□ -0.38
SSBP3-205ENST00000417664 OR11H1Q8NG94 326 aa12.67□□□□□ -0.38
SSBP3-205ENST00000417664 OR8A1Q8NGG7 326 aa12.67□□□□□ -0.38
SSBP3-205ENST00000417664 OR1N2Q8NGR9 330 aa12.67□□□□□ -0.38
SSBP3-205ENST00000417664 MS4A6AQ9H2W1 248 aa12.67□□□□□ -0.38
SSBP3-205ENST00000417664 LY6G6DO95868 133 aa12.67□□□□□ -0.38
SSBP3-205ENST00000417664 SNRPD3P62318 126 aaKnown RBP12.67□□□□□ -0.38
SSBP3-205ENST00000417664 SLAQ13239 276 aa12.67□□□□□ -0.38
SSBP3-205ENST00000417664 GDF5OSQ5U4N7 250 aa12.67□□□□□ -0.38
SSBP3-205ENST00000417664 GATD1Q8NB37 220 aa12.67□□□□□ -0.38
SSBP3-205ENST00000417664 KLHL30-AS1Q8NEE0 82 aa12.67□□□□□ -0.38
SSBP3-205ENST00000417664 NDUFA7O95182 113 aa12.66□□□□□ -0.38
SSBP3-205ENST00000417664 ORM1P02763 201 aa12.66□□□□□ -0.38
SSBP3-205ENST00000417664 EDN2P20800 178 aa12.66□□□□□ -0.38
SSBP3-205ENST00000417664 PAFAH1B2P68402 229 aa12.66□□□□□ -0.38
SSBP3-205ENST00000417664 KHDC1LQ5JSQ8 128 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms