RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PRO0461Q9UI25 63 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 V9GYY9 64 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 HLA-DRB4X5D2U9 266 aa4.27□□□□□ -1.73
ECHDC1-206ENST00000417628 IGHV3-15A0A0B4J1V0 119 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 PRSS37A4D1T9 235 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 CRYM-AS1A6NIL9 109 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 FOXI3A8MTJ6 420 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 C9JAW5 83 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 E9PLD3 99 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 C11orf98E9PRG8 122 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 TIMM8AO60220 97 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 APCSP02743 223 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 MT-ATP8P03928 68 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 CT62P0C5K7 136 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 MYOD1P15172 320 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 BLVRBP30043 206 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 PSMB3P49720 205 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 KIAA1644Q3SXP7 199 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 LYRM7Q5U5X0 104 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 MORN3Q6PF18 240 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 TMEM136Q6ZRR5 245 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 APRG1Q8IVJ8 170 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 OR5D14Q8NGL3 314 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 OR10G7Q8NGN6 311 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 PIGCQ92535 297 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 RASL10AQ92737 203 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 LINC01600Q96MT4 127 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 AMELYQ99218 206 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 LINC01587Q99440 93 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 MCHR1Q99705 422 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 MCRIP2Q9BUT9 160 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 NAA60Q9H7X0 242 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 ELOVL3Q9HB03 270 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 HIGD1AQ9Y241 93 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 OR2W1Q9Y3N9 320 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 MPC1Q9Y5U8 109 aa4.26□□□□□ -1.73
ECHDC1-206ENST00000417628 IGLV5-39A0A0G2JS06 123 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 GRIFINA4D1Z8 144 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 CEBPZOSA8MTT3 80 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 C9JCJ5 164 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 CCDC179H3BU77 68 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 OR2J3O76001 311 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 APOMO95445 188 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 SLC25A5P05141 298 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 CNTFRP26992 372 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 GLRXP35754 106 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 CCL8P80075 99 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 GAGE2BQ13066 116 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 TAL2Q16559 108 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 TBC1D28Q2M2D7 210 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 RPEL1Q2QD12 228 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 GAGE2EQ4V326 116 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 PHLDA2Q53GA4 152 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 MEIG1Q5JSS6 88 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 TSPO2Q5TGU0 170 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 CBLN3Q6UW01 205 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 TRAPPC6BQ86SZ2 158 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 ATOH7Q8N100 152 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 H1FXQ92522 213 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 CHCHD1Q96BP2 118 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 RAB40CQ96S21 281 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 IMUPQ9GZP8 106 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 FAM234AQ9H0X4 552 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 SLC39A9Q9NUM3 307 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 IDI2-AS1Q9NZ38 188 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 GAGE2DQ9UEU5 116 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 SMAD5-AS1Q9Y6J3 95 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 ARL2-SNX15V9GYD0 113 aa4.25□□□□□ -1.73
ECHDC1-206ENST00000417628 IGHV1-24A0A0C4DH33 117 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 CTXND1A0A1B0GTU2 59 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 TINCRA0A1B0GVN0 87 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 A0A1B0GVY2 172 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 ZNF850A8MQ14 1090 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 LINC01619G3V211 115 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 SDCBPO00560 298 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 NPFFO15130 113 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 NBR2O15453 112 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 HSBP1O75506 76 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 NUDT14O95848 222 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 NAPSAO96009 420 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 IGLV1-44P01699 117 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 FGF6P10767 208 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 IGFBP3P17936 291 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 GATA2P23769 480 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 MPV17P39210 176 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 SSR2P43308 183 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 EMP1P54849 157 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 HSPB3Q12988 150 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 DIAPH2-AS1Q14236 149 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 ZNF141Q15928 474 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 TTC32Q5I0X7 151 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 LINC01545Q5VT33 79 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 KCTD18Q6PI47 426 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 LYPD6Q86Y78 171 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 ZNF695Q8IW36 515 aa4.24□□□□□ -1.73
ECHDC1-206ENST00000417628 TMEM123Q8N131 208 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms