RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	ICAM4	Q14773	271 aa		11.8	□□□□□ -0.52
DDR1-231	ENST00000417521	DPPA3	Q6W0C5	159 aa		11.8	□□□□□ -0.52
DDR1-231	ENST00000417521	RPUSD4	Q96CM3	377 aa	Known RBP	11.8	□□□□□ -0.52
DDR1-231	ENST00000417521		A0A1B0GV50	99 aa		11.79	□□□□□ -0.52
DDR1-231	ENST00000417521	PRAC2	D3DTV9	90 aa		11.79	□□□□□ -0.52
DDR1-231	ENST00000417521	AMTN	Q6UX39	209 aa		11.79	□□□□□ -0.52
DDR1-231	ENST00000417521	SUN5	Q8TC36	379 aa		11.79	□□□□□ -0.52
DDR1-231	ENST00000417521	SFT2D1	Q8WV19	159 aa		11.79	□□□□□ -0.52
DDR1-231	ENST00000417521		Q9H3A6	140 aa		11.79	□□□□□ -0.52
DDR1-231	ENST00000417521	AAMDC	Q9H7C9	122 aa		11.79	□□□□□ -0.52
DDR1-231	ENST00000417521	TMEM189	A5PLL7	270 aa		11.78	□□□□□ -0.52
DDR1-231	ENST00000417521	LY6G6C	O95867	125 aa		11.78	□□□□□ -0.52
DDR1-231	ENST00000417521	RAB5C	P51148	216 aa		11.78	□□□□□ -0.52
DDR1-231	ENST00000417521	CNN1	P51911	297 aa	Known RBP	11.78	□□□□□ -0.52
DDR1-231	ENST00000417521	TCTA	P57738	103 aa		11.78	□□□□□ -0.52
DDR1-231	ENST00000417521	C2CD4C	Q8TF44	421 aa		11.78	□□□□□ -0.52
DDR1-231	ENST00000417521	MBD3L1	Q8WWY6	194 aa		11.78	□□□□□ -0.52
DDR1-231	ENST00000417521	TMEM167B	Q9NRX6	74 aa		11.78	□□□□□ -0.52
DDR1-231	ENST00000417521	GOLT1B	Q9Y3E0	138 aa		11.78	□□□□□ -0.52
DDR1-231	ENST00000417521	AMBP	P02760	352 aa		11.77	□□□□□ -0.52
DDR1-231	ENST00000417521	H2AFB1	P0C5Y9	115 aa		11.77	□□□□□ -0.52
DDR1-231	ENST00000417521	C1orf158	Q8N1D5	194 aa		11.77	□□□□□ -0.52
DDR1-231	ENST00000417521	IGHV3OR16-12	A0A075B7B8	117 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	HIST1H1A	Q02539	215 aa	Predicted RBP	11.76	□□□□□ -0.53
DDR1-231	ENST00000417521		Q6ZTC4	211 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	LYPD1	Q8N2G4	141 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	OR8A1	Q8NGG7	326 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	IGF2BP2-AS1	Q96M15	143 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	TRAV10	A0A0B4J240	114 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	PGP	A6NDG6	321 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	UBE2G2	P60604	165 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	LGALS9C	Q6DKI2	356 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	MRPL53	Q96EL3	112 aa	Known RBP	11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	OTOR	Q9NRC9	128 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	CELA1	Q9UNI1	258 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	PRELID1	Q9Y255	219 aa		11.76	□□□□□ -0.53
DDR1-231	ENST00000417521	C12orf74	Q32Q52	190 aa		11.75	□□□□□ -0.53
DDR1-231	ENST00000417521	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.75	□□□□□ -0.53
DDR1-231	ENST00000417521	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.74	□□□□□ -0.53
DDR1-231	ENST00000417521	GGTLC3	B5MD39	225 aa		11.74	□□□□□ -0.53
DDR1-231	ENST00000417521	IGLL5	B9A064	214 aa		11.74	□□□□□ -0.53
DDR1-231	ENST00000417521	IGKV2D-40	P01614	121 aa	Predicted RBP	11.74	□□□□□ -0.53
DDR1-231	ENST00000417521	HBE1	P02100	147 aa		11.74	□□□□□ -0.53
DDR1-231	ENST00000417521	SPART-AS1	P0CW21	52 aa		11.74	□□□□□ -0.53
DDR1-231	ENST00000417521	CCL20	P78556	96 aa		11.74	□□□□□ -0.53
DDR1-231	ENST00000417521	OR10J6P	Q8NGY7	276 aa		11.74	□□□□□ -0.53
DDR1-231	ENST00000417521	TEX48	A0A1B0GUV7	120 aa		11.73	□□□□□ -0.53
DDR1-231	ENST00000417521	CRX	O43186	299 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-231	ENST00000417521	ERCC8	Q13216	396 aa		11.73	□□□□□ -0.53
DDR1-231	ENST00000417521	SPINK13	Q1W4C9	94 aa		11.73	□□□□□ -0.53
DDR1-231	ENST00000417521	RRN3P1	Q2M238	152 aa		11.73	□□□□□ -0.53
DDR1-231	ENST00000417521	RPH3AL	Q9UNE2	315 aa		11.73	□□□□□ -0.53
DDR1-231	ENST00000417521	TRAV1-1	A0A0B4J248	108 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	FAM74A7	A6NL05	159 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521		M0R2Z0	102 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	INS	P01308	110 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	SLC25A5	P05141	298 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	EMP1	P54849	157 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	SUMO1	P63165	101 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	GNG5	P63218	68 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	TEX261	Q6UWH6	196 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	CMTM2	Q8TAZ6	248 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	TMEM208	Q9BTX3	173 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	APLN	Q9ULZ1	77 aa		11.72	□□□□□ -0.53
DDR1-231	ENST00000417521	LOC102723971	A0A1B0GUV8	181 aa		11.71	□□□□□ -0.53
DDR1-231	ENST00000417521		A0A1W2PRE2	83 aa		11.71	□□□□□ -0.53
DDR1-231	ENST00000417521	DIRC3	C9JPN6	131 aa		11.71	□□□□□ -0.53
DDR1-231	ENST00000417521	NPIPB6	E9PJ23	425 aa		11.71	□□□□□ -0.53
DDR1-231	ENST00000417521	CSN1S1	P47710	185 aa		11.71	□□□□□ -0.53
DDR1-231	ENST00000417521	RXFP4	Q8TDU9	374 aa		11.71	□□□□□ -0.53
DDR1-231	ENST00000417521	VGLL1	Q99990	258 aa		11.71	□□□□□ -0.53
DDR1-231	ENST00000417521	PPP1R14D	Q9NXH3	145 aa		11.71	□□□□□ -0.53
DDR1-231	ENST00000417521	DKK2	Q9UBU2	259 aa		11.71	□□□□□ -0.53
DDR1-231	ENST00000417521	DEFB131B	A0A096LNP1	70 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	PAGE4	O60829	102 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	ZNF767P	Q75MW2	155 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	ZNF680	Q8NEM1	530 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	AGPAT4-IT1	Q9H0P7	198 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	CT45A10	P0DMU9	189 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	FAM222A	Q5U5X8	452 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	CST9LP1	Q5W188	147 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	GOLT1A	Q6ZVE7	132 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	C5orf17	Q8NAS9	161 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	GNG13	Q9P2W3	67 aa		11.7	□□□□□ -0.54
DDR1-231	ENST00000417521	IGHV4-4	A0A075B6R2	117 aa		11.69	□□□□□ -0.54
DDR1-231	ENST00000417521	TEX46	H3BTG2	121 aa		11.69	□□□□□ -0.54
DDR1-231	ENST00000417521	CDKN1B	P46527	198 aa		11.69	□□□□□ -0.54
DDR1-231	ENST00000417521	ATP5G3	P48201	142 aa		11.69	□□□□□ -0.54
DDR1-231	ENST00000417521	BLOC1S1	P78537	153 aa		11.69	□□□□□ -0.54
DDR1-231	ENST00000417521	C9orf47	Q6ZRZ4	202 aa		11.69	□□□□□ -0.54
DDR1-231	ENST00000417521	NIPSNAP3B	Q9BS92	247 aa		11.69	□□□□□ -0.54
DDR1-231	ENST00000417521	EPDR1	Q9UM22	224 aa		11.69	□□□□□ -0.54
DDR1-231	ENST00000417521	KMT2A	Q03164	3969 aa		11.68	□□□□□ -0.54
DDR1-231	ENST00000417521	TRAV12-2	A0A075B6T6	113 aa		11.68	□□□□□ -0.54
DDR1-231	ENST00000417521	IFNA7	P01567	189 aa		11.68	□□□□□ -0.54
DDR1-231	ENST00000417521	TCRA	P04437	139 aa		11.68	□□□□□ -0.54
DDR1-231	ENST00000417521	TSPO	P30536	169 aa		11.68	□□□□□ -0.54
DDR1-231	ENST00000417521	TMEM256	Q8N2U0	113 aa		11.68	□□□□□ -0.54
DDR1-231	ENST00000417521		Q8TAT8	98 aa		11.68	□□□□□ -0.54
DDR1-231	ENST00000417521	PCNP	Q8WW12	178 aa	Known RBP	11.68	□□□□□ -0.54

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