RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 IGKV2-40A0A087WW87 121 aaPredicted RBP16.7■□□□□ 0.26
SMARCB1-205ENST00000417137 DIRC3C9JPN6 131 aa16.7■□□□□ 0.26
SMARCB1-205ENST00000417137 IGKV2D-40P01614 121 aaPredicted RBP16.7■□□□□ 0.26
SMARCB1-205ENST00000417137 HBE1P02100 147 aa16.7■□□□□ 0.26
SMARCB1-205ENST00000417137 CD300CQ08708 224 aa16.7■□□□□ 0.26
SMARCB1-205ENST00000417137 SLC51BQ86UW2 128 aa16.7■□□□□ 0.26
SMARCB1-205ENST00000417137 TMEM256Q8N2U0 113 aa16.7■□□□□ 0.26
SMARCB1-205ENST00000417137 C20orf144Q9BQM9 153 aa16.7■□□□□ 0.26
SMARCB1-205ENST00000417137 TMEM189A5PLL7 270 aa16.69■□□□□ 0.26
SMARCB1-205ENST00000417137 MAP1LC3B2A6NCE7 125 aa16.69■□□□□ 0.26
SMARCB1-205ENST00000417137 DEFB4AO15263 64 aa16.69■□□□□ 0.26
SMARCB1-205ENST00000417137 TMED6Q8WW62 240 aa16.69■□□□□ 0.26
SMARCB1-205ENST00000417137 VGLL1Q99990 258 aa16.69■□□□□ 0.26
SMARCB1-205ENST00000417137 MAP1LC3BQ9GZQ8 125 aa16.69■□□□□ 0.26
SMARCB1-205ENST00000417137 RBMY1A1P0DJD3 496 aaKnown RBP16.68■□□□□ 0.26
SMARCB1-205ENST00000417137 RBMY1CP0DJD4 496 aa16.68■□□□□ 0.26
SMARCB1-205ENST00000417137 RBMY1FQ15415 496 aaKnown RBP16.68■□□□□ 0.26
SMARCB1-205ENST00000417137 RRN3P1Q2M238 152 aa16.68■□□□□ 0.26
SMARCB1-205ENST00000417137 FAM213BQ8TBF2 198 aa16.68■□□□□ 0.26
SMARCB1-205ENST00000417137 LINC01587Q99440 93 aa16.68■□□□□ 0.26
SMARCB1-205ENST00000417137 A0A1W2PRE2 83 aa16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 NMBP08949 121 aa16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 RAB5CP51148 216 aa16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 ZNF138P52744 262 aa16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 FGF8P55075 233 aaPredicted RBP16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 C9orf62Q8N4C0 152 aa16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 C11orf45Q8TAV5 145 aa16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 PLA2G2EQ9NZK7 142 aa16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 ZNF492Q9P255 531 aa16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 RPH3ALQ9UNE2 315 aa16.67■□□□□ 0.26
SMARCB1-205ENST00000417137 TRBV7-9A0A0J9YWB2 115 aa16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 SERTM2A0A1B0GWG4 89 aa16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 FHITP49789 147 aa16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 SUMO1P63165 101 aaKnown RBP16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 C5orf17Q8NAS9 161 aa16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 SFT2D1Q8WV19 159 aa16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 MBD3L1Q8WWY6 194 aa16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 FAM19A4Q96LR4 140 aa16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 NKX6-2Q9C056 277 aaPredicted RBP16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 TMPRSS5Q9H3S3 457 aa16.66■□□□□ 0.26
SMARCB1-205ENST00000417137 H7BYZ3 331 aa16.65■□□□□ 0.26
SMARCB1-205ENST00000417137 J3KRW8 73 aa16.65■□□□□ 0.26
SMARCB1-205ENST00000417137 K7EQM0 130 aa16.65■□□□□ 0.26
SMARCB1-205ENST00000417137 GFI1BQ5VTD9 330 aa16.65■□□□□ 0.26
SMARCB1-205ENST00000417137 GPX1P07203 203 aa16.64■□□□□ 0.25
SMARCB1-205ENST00000417137 H2AFB1P0C5Y9 115 aa16.64■□□□□ 0.25
SMARCB1-205ENST00000417137 CRISP2P16562 243 aa16.64■□□□□ 0.25
SMARCB1-205ENST00000417137 TAS2R60P59551 318 aa16.64■□□□□ 0.25
SMARCB1-205ENST00000417137 GOLT1AQ6ZVE7 132 aa16.64■□□□□ 0.25
SMARCB1-205ENST00000417137 NIPSNAP3BQ9BS92 247 aa16.64■□□□□ 0.25
SMARCB1-205ENST00000417137 LENEPQ9Y5L5 61 aa16.64■□□□□ 0.25
SMARCB1-205ENST00000417137 LOC102723971A0A1B0GUV8 181 aa16.63■□□□□ 0.25
SMARCB1-205ENST00000417137 CXorf65A6NEN9 183 aa16.63■□□□□ 0.25
SMARCB1-205ENST00000417137 KLLNB2CW77 178 aa16.63■□□□□ 0.25
SMARCB1-205ENST00000417137 KIR3DS1Q14943 382 aa16.63■□□□□ 0.25
SMARCB1-205ENST00000417137 CASC10Q5T4H9 136 aa16.63■□□□□ 0.25
SMARCB1-205ENST00000417137 ZFAND6Q6FIF0 208 aa16.63■□□□□ 0.25
SMARCB1-205ENST00000417137 EPDR1Q9UM22 224 aa16.63■□□□□ 0.25
SMARCB1-205ENST00000417137 TRAV12-3A0A0B4J271 114 aa16.62■□□□□ 0.25
SMARCB1-205ENST00000417137 C7orf71A4D174 169 aa16.62■□□□□ 0.25
SMARCB1-205ENST00000417137 ZNF705GA8MUZ8 300 aaPredicted RBP16.62■□□□□ 0.25
SMARCB1-205ENST00000417137 UBE2G2P60604 165 aa16.62■□□□□ 0.25
SMARCB1-205ENST00000417137 GGTLC3B5MD39 225 aa16.61■□□□□ 0.25
SMARCB1-205ENST00000417137 IFNA7P01567 189 aa16.61■□□□□ 0.25
SMARCB1-205ENST00000417137 TCRAP04437 139 aa16.61■□□□□ 0.25
SMARCB1-205ENST00000417137 HTN1P15515 57 aa16.61■□□□□ 0.25
SMARCB1-205ENST00000417137 RNASE4P34096 147 aaKnown RBP16.61■□□□□ 0.25
SMARCB1-205ENST00000417137 EMP1P54849 157 aa16.61■□□□□ 0.25
SMARCB1-205ENST00000417137 GNG5P63218 68 aa16.61■□□□□ 0.25
SMARCB1-205ENST00000417137 TEX48A0A1B0GUV7 120 aa16.6■□□□□ 0.25
SMARCB1-205ENST00000417137 FAM74A7A6NL05 159 aa16.6■□□□□ 0.25
SMARCB1-205ENST00000417137 TEX46H3BTG2 121 aa16.6■□□□□ 0.25
SMARCB1-205ENST00000417137 SPART-AS1P0CW21 52 aa16.6■□□□□ 0.25
SMARCB1-205ENST00000417137 SULT1A2P50226 295 aa16.6■□□□□ 0.25
SMARCB1-205ENST00000417137 CCDC28AQ8IWP9 274 aa16.6■□□□□ 0.25
SMARCB1-205ENST00000417137 ZFAND2AQ8N6M9 145 aa16.6■□□□□ 0.25
SMARCB1-205ENST00000417137 Q8TAT8 98 aa16.6■□□□□ 0.25
SMARCB1-205ENST00000417137 YTHDF2Q9Y5A9 579 aaKnown RBP16.6■□□□□ 0.25
SMARCB1-205ENST00000417137 FBLL1A6NHQ2 334 aaKnown RBP16.59■□□□□ 0.25
SMARCB1-205ENST00000417137 PPT1P50897 306 aa16.59■□□□□ 0.25
SMARCB1-205ENST00000417137 NANOS2P60321 138 aaKnown RBP16.59■□□□□ 0.25
SMARCB1-205ENST00000417137 PMS2P11Q13670 270 aa16.59■□□□□ 0.25
SMARCB1-205ENST00000417137 PYGO2Q9BRQ0 406 aa16.59■□□□□ 0.25
SMARCB1-205ENST00000417137 ATG101Q9BSB4 218 aa16.59■□□□□ 0.25
SMARCB1-205ENST00000417137 ARL2-SNX15V9GYD0 113 aa16.59■□□□□ 0.25
SMARCB1-205ENST00000417137 ZNF493Q6ZR52 646 aa16.58■□□□□ 0.24
SMARCB1-205ENST00000417137 CYB561D1Q8N8Q1 229 aa16.58■□□□□ 0.24
SMARCB1-205ENST00000417137 NDFIP1Q9BT67 221 aa16.58■□□□□ 0.24
SMARCB1-205ENST00000417137 F6UZH7 168 aa16.57■□□□□ 0.24
SMARCB1-205ENST00000417137 ZNF324O75467 553 aaPredicted RBP16.57■□□□□ 0.24
SMARCB1-205ENST00000417137 NKX2-5P52952 324 aaPredicted RBP16.57■□□□□ 0.24
SMARCB1-205ENST00000417137 BTN1A1Q13410 526 aa16.57■□□□□ 0.24
SMARCB1-205ENST00000417137 CST9LP1Q5W188 147 aa16.57■□□□□ 0.24
SMARCB1-205ENST00000417137 HIST1H2BAQ96A08 127 aa16.57■□□□□ 0.24
SMARCB1-205ENST00000417137 C16orf74Q96GX8 76 aa16.57■□□□□ 0.24
SMARCB1-205ENST00000417137 TCEAL7Q9BRU2 100 aa16.57■□□□□ 0.24
SMARCB1-205ENST00000417137 A0A1B0GV50 99 aa16.56■□□□□ 0.24
SMARCB1-205ENST00000417137 NUPR2A6NF83 97 aa16.56■□□□□ 0.24
SMARCB1-205ENST00000417137 PRM2P04554 102 aa16.56■□□□□ 0.24
SMARCB1-205ENST00000417137 AZU1P20160 251 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms