RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TMEM167AQ8TBQ9 72 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 TRGV9Q99603 122 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 RALYQ9UKM9 306 aaKnown RBP11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 LOC107984156A0A0G2JMH3 177 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 DPM2O94777 84 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 XGP55808 180 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 Q6AWC8 147 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 ZNF493Q6ZR52 646 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 ARL17AQ8IVW1 177 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 RITA1Q96K30 269 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 MAP1LC3AQ9H492 121 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 MSRB1Q9NZV6 116 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 FAM215AQ9Y5M1 114 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 ARHGAP32A7KAX9 2087 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 M0R1B8 84 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 CEACAM4O75871 244 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 FAM27E3Q08E93 113 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 C22orf34Q6ZV56 151 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 ANAPC13Q9BS18 74 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 CDIP1Q9H305 208 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 PRO0461Q9UI25 63 aa11.59□□□□□ -0.55
NCKIPSD-204ENST00000416649 IGHV1-18A0A0C4DH31 117 aa11.58□□□□□ -0.56
NCKIPSD-204ENST00000416649 NDUFA3O95167 84 aa11.58□□□□□ -0.56
NCKIPSD-204ENST00000416649 GATA1P15976 413 aaPredicted RBP11.58□□□□□ -0.56
NCKIPSD-204ENST00000416649 PAX8Q06710 450 aa11.58□□□□□ -0.56
NCKIPSD-204ENST00000416649 Q6ZS92 163 aa11.58□□□□□ -0.56
NCKIPSD-204ENST00000416649 TMEM158Q8WZ71 300 aa11.58□□□□□ -0.56
NCKIPSD-204ENST00000416649 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.56
NCKIPSD-204ENST00000416649 LINC00312Q9Y6C7 94 aa11.58□□□□□ -0.56
NCKIPSD-204ENST00000416649 ANXA2RQ3ZCQ2 193 aa11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 U3KQK5 164 aa11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 CELSR1Q9NYQ6 3014 aa11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 B5MCH6 92 aa11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 SH2D1AO60880 128 aa11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 TGFAP01135 160 aa11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 PSMB2P49721 201 aa11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 ZNF474Q6S9Z5 364 aaPredicted RBP11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 Q6ZUT4 128 aa11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 PGPEP1Q9NXJ5 209 aa11.57□□□□□ -0.56
NCKIPSD-204ENST00000416649 FHL3Q13643 280 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 NFE4Q86UQ8 179 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 GATD1Q8NB37 220 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 C1QTNF4Q9BXJ3 329 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 VMA21Q3ZAQ7 101 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 MALRD1Q5VYJ5 2156 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 IGF2-ASQ6U949 168 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 ZNF833PQ6ZTB9 187 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 NGBQ9NPG2 151 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 CFAP161Q6P656 301 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 TMEM75Q8N9X5 138 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 GAFA1Q96PS6 74 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 RASL11BQ9BPW5 248 aa11.56□□□□□ -0.56
NCKIPSD-204ENST00000416649 TRBV19A0A075B6N1 114 aa11.55□□□□□ -0.56
NCKIPSD-204ENST00000416649 PRSS29PA6NIE9 313 aa11.55□□□□□ -0.56
NCKIPSD-204ENST00000416649 CCL8P80075 99 aa11.55□□□□□ -0.56
NCKIPSD-204ENST00000416649 RNF7Q9UBF6 113 aa11.55□□□□□ -0.56
NCKIPSD-204ENST00000416649 ANKHD1Q8IWZ3 2542 aaKnown RBP11.55□□□□□ -0.56
NCKIPSD-204ENST00000416649 KLRD1Q13241 179 aa11.55□□□□□ -0.56
NCKIPSD-204ENST00000416649 Q8TAT8 98 aa11.55□□□□□ -0.56
NCKIPSD-204ENST00000416649 RPEQ96AT9 228 aa11.55□□□□□ -0.56
NCKIPSD-204ENST00000416649 S4R3C0 116 aa11.55□□□□□ -0.56
NCKIPSD-204ENST00000416649 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 RPL27AP46776 148 aaKnown RBP11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 RAXQ9Y2V3 346 aa11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 UFC1Q9Y3C8 167 aa11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 IGKV2-40A0A087WW87 121 aaPredicted RBP11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 H3BVH4 76 aa11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 TSPAN13O95857 204 aa11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 IGKV2D-40P01614 121 aaPredicted RBP11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 IL4P05112 153 aa11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 CNTFRP26992 372 aa11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 ACACBO00763 2458 aa11.54□□□□□ -0.56
NCKIPSD-204ENST00000416649 LINC01548A6NM66 108 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 NCBP2LA6PVI3 153 aaKnown RBP11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 HOXA3O43365 443 aaPredicted RBP11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 ORM1P02763 201 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 C5orf64Q2M2E5 130 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 ERG28Q9UKR5 140 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 ZFHX3Q15911 3703 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 FAM90A27PA6NNH2 459 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 TNFRSF6BO95407 300 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 LHBP01229 141 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 CRYGCP07315 174 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 SMCPP49901 116 aaPredicted RBP11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 IGFL3Q6UXB1 125 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 GFRALQ6UXV0 394 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 ZMAT4Q9H898 229 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 INS-IGF2F8WCM5 200 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 IGLV2-23P01705 113 aa11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 EGR2P11161 476 aaPredicted RBP11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 HOXB4P17483 251 aaPredicted RBP11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 TNFAIP6P98066 277 aaPredicted RBP11.53□□□□□ -0.56
NCKIPSD-204ENST00000416649 PIFOQ8TCI5 191 aa11.52□□□□□ -0.57
NCKIPSD-204ENST00000416649 LINC01549A6NIU2 74 aa11.52□□□□□ -0.57
NCKIPSD-204ENST00000416649 ZFP2Q6ZN57 461 aa11.52□□□□□ -0.57
NCKIPSD-204ENST00000416649 DLX4Q92988 240 aaPredicted RBP11.52□□□□□ -0.57
NCKIPSD-204ENST00000416649 KLK15Q9H2R5 256 aa11.52□□□□□ -0.57
NCKIPSD-204ENST00000416649 AAMDCQ9H7C9 122 aa11.52□□□□□ -0.57
NCKIPSD-204ENST00000416649 RAI1Q7Z5J4 1906 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms