RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 DEFB136Q30KP8 78 aa13.74□□□□□ -0.21
RTN4R-202ENST00000416372 WIPF2Q8TF74 440 aaPredicted RBP13.74□□□□□ -0.21
RTN4R-202ENST00000416372 TMEM18Q96B42 140 aa13.74□□□□□ -0.21
RTN4R-202ENST00000416372 C16orf92Q96LL3 132 aa13.74□□□□□ -0.21
RTN4R-202ENST00000416372 TRAPPC1Q9Y5R8 145 aa13.74□□□□□ -0.21
RTN4R-202ENST00000416372 V9GYV3 84 aa13.74□□□□□ -0.21
RTN4R-202ENST00000416372 ANK3Q12955 4377 aaKnown RBP13.74□□□□□ -0.21
RTN4R-202ENST00000416372 TRAV8-2A0A0B4J237 113 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 TMEM213A2RRL7 107 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 TSTD3H0UI37 97 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 EDN2P20800 178 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 DEFA6Q01524 100 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 KLHL30-AS1Q8NEE0 82 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 DPF1Q92782 380 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 IL36BQ9NZH7 164 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 ZFP30Q9Y2G7 519 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 A8MWP6 167 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 LINC01619G3V211 115 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 FAM231DQ6ZW35 169 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 CLEC5AQ9NY25 188 aa13.73□□□□□ -0.21
RTN4R-202ENST00000416372 NDUFA7O95182 113 aa13.72□□□□□ -0.21
RTN4R-202ENST00000416372 GZMBP10144 247 aa13.72□□□□□ -0.21
RTN4R-202ENST00000416372 TCF24Q7RTU0 167 aa13.72□□□□□ -0.21
RTN4R-202ENST00000416372 OR11H1Q8NG94 326 aa13.72□□□□□ -0.21
RTN4R-202ENST00000416372 OR1N2Q8NGR9 330 aa13.72□□□□□ -0.21
RTN4R-202ENST00000416372 MRPL53Q96EL3 112 aaKnown RBP13.72□□□□□ -0.21
RTN4R-202ENST00000416372 NRN1Q9NPD7 142 aa13.72□□□□□ -0.21
RTN4R-202ENST00000416372 FBLL1A6NHQ2 334 aaKnown RBP13.71□□□□□ -0.21
RTN4R-202ENST00000416372 ZNF705GA8MUZ8 300 aaPredicted RBP13.71□□□□□ -0.21
RTN4R-202ENST00000416372 SLURP1P55000 103 aa13.71□□□□□ -0.21
RTN4R-202ENST00000416372 KLF5Q13887 457 aaPredicted RBP13.71□□□□□ -0.21
RTN4R-202ENST00000416372 GBGT1Q8N5D6 347 aa13.71□□□□□ -0.21
RTN4R-202ENST00000416372 NUDT10Q8NFP7 164 aa13.71□□□□□ -0.21
RTN4R-202ENST00000416372 WFDC12Q8WWY7 111 aa13.71□□□□□ -0.21
RTN4R-202ENST00000416372 NUDT11Q96G61 164 aa13.71□□□□□ -0.21
RTN4R-202ENST00000416372 ZMAT5Q9UDW3 170 aaKnown RBP13.71□□□□□ -0.21
RTN4R-202ENST00000416372 SELENOKQ9Y6D0 94 aa13.71□□□□□ -0.21
RTN4R-202ENST00000416372 IGKV3-7A0A075B6H7 116 aa13.71□□□□□ -0.22
RTN4R-202ENST00000416372 PRAC2D3DTV9 90 aa13.71□□□□□ -0.22
RTN4R-202ENST00000416372 HAX1O00165 279 aa13.71□□□□□ -0.22
RTN4R-202ENST00000416372 CD28P10747 220 aa13.71□□□□□ -0.22
RTN4R-202ENST00000416372 HIST2H2BDQ6DRA6 164 aa13.71□□□□□ -0.22
RTN4R-202ENST00000416372 C11orf44Q8N8P7 122 aa13.71□□□□□ -0.22
RTN4R-202ENST00000416372 ASCL2Q99929 193 aa13.71□□□□□ -0.22
RTN4R-202ENST00000416372 VGLL1Q99990 258 aa13.71□□□□□ -0.22
RTN4R-202ENST00000416372 ZNF492Q9P255 531 aa13.71□□□□□ -0.22
RTN4R-202ENST00000416372 TCF21O43680 179 aa13.7□□□□□ -0.22
RTN4R-202ENST00000416372 DAZAP1Q96EP5 407 aaKnown RBP13.7□□□□□ -0.22
RTN4R-202ENST00000416372 NF1P21359 2839 aa13.7□□□□□ -0.22
RTN4R-202ENST00000416372 DUX3Q96PT4 197 aa13.69□□□□□ -0.22
RTN4R-202ENST00000416372 RBAKDNA6NC62 111 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 C2orf70A6NJV1 201 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 SOCS3O14543 225 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 CBLN1P23435 193 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 DDTP30046 118 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 SAPCD1Q5SSQ6 148 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 LINC00322Q6ZN03 302 aaPredicted RBP13.68□□□□□ -0.22
RTN4R-202ENST00000416372 ZC2HC1AQ96GY0 325 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 RNF114Q9Y508 228 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 HIVEP1P15822 2718 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 A0A1W2PRX2 142 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 M0QZ24 198 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 RPL19P84098 196 aaKnown RBP13.68□□□□□ -0.22
RTN4R-202ENST00000416372 ERCC8Q13216 396 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 ZNF738Q8NE65 137 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 Q8TAT8 98 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 C20orf173Q96LM9 149 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 C8orf49Q96NF6 230 aa13.68□□□□□ -0.22
RTN4R-202ENST00000416372 C19orf71A6NCJ1 209 aa13.67□□□□□ -0.22
RTN4R-202ENST00000416372 CRLF1O75462 422 aa13.67□□□□□ -0.22
RTN4R-202ENST00000416372 P01737 135 aa13.67□□□□□ -0.22
RTN4R-202ENST00000416372 CA1P00915 261 aaPredicted RBP13.66□□□□□ -0.22
RTN4R-202ENST00000416372 CT45A10P0DMU9 189 aa13.66□□□□□ -0.22
RTN4R-202ENST00000416372 COX19Q49B96 90 aa13.66□□□□□ -0.22
RTN4R-202ENST00000416372 PRR25Q96S07 402 aa13.66□□□□□ -0.22
RTN4R-202ENST00000416372 CITED2Q99967 270 aaPredicted RBP13.66□□□□□ -0.22
RTN4R-202ENST00000416372 NDFIP1Q9BT67 221 aa13.66□□□□□ -0.22
RTN4R-202ENST00000416372 RPP21Q9H633 154 aaKnown RBP13.66□□□□□ -0.22
RTN4R-202ENST00000416372 PEMTQ9UBM1 199 aa13.66□□□□□ -0.22
RTN4R-202ENST00000416372 TSSC4Q9Y5U2 329 aaPredicted RBP13.66□□□□□ -0.22
RTN4R-202ENST00000416372 TCL1AP56279 114 aa13.66□□□□□ -0.22
RTN4R-202ENST00000416372 IQCJQ1A5X6 159 aa13.66□□□□□ -0.22
RTN4R-202ENST00000416372 SAMD13Q5VXD3 122 aa13.66□□□□□ -0.22
RTN4R-202ENST00000416372 C14orf144Q96I85 54 aa13.66□□□□□ -0.22
RTN4R-202ENST00000416372 SMIM27A0A1W2PRY6 76 aa13.65□□□□□ -0.22
RTN4R-202ENST00000416372 ID1P41134 155 aa13.65□□□□□ -0.22
RTN4R-202ENST00000416372 WFDC3Q8IUB2 231 aa13.65□□□□□ -0.22
RTN4R-202ENST00000416372 DLX4Q92988 240 aaPredicted RBP13.65□□□□□ -0.22
RTN4R-202ENST00000416372 RAX2Q96IS3 184 aa13.65□□□□□ -0.22
RTN4R-202ENST00000416372 ESDP10768 282 aa13.64□□□□□ -0.23
RTN4R-202ENST00000416372 PROK1P58294 105 aa13.64□□□□□ -0.23
RTN4R-202ENST00000416372 SRSF2Q01130 221 aaKnown RBP13.64□□□□□ -0.23
RTN4R-202ENST00000416372 TMEM78Q5T7P6 136 aa13.64□□□□□ -0.23
RTN4R-202ENST00000416372 OR9G4Q8NGQ1 327 aa13.64□□□□□ -0.23
RTN4R-202ENST00000416372 AGPAT4-IT1Q9H0P7 198 aa13.64□□□□□ -0.23
RTN4R-202ENST00000416372 NSD1Q96L73 2696 aaPredicted RBP13.64□□□□□ -0.23
RTN4R-202ENST00000416372 OVOL1O14753 267 aa13.63□□□□□ -0.23
RTN4R-202ENST00000416372 OR4B1Q8NGF8 309 aa13.63□□□□□ -0.23
RTN4R-202ENST00000416372 TSKUQ8WUA8 353 aa13.63□□□□□ -0.23
RTN4R-202ENST00000416372 GNB1LQ9BYB4 327 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms