RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SPATA3Q8NHX4 192 aa11.19□□□□□ -0.62
SGCE-202ENST00000415788 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
SGCE-202ENST00000415788 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
SGCE-202ENST00000415788 CCL25O15444 150 aa11.19□□□□□ -0.62
SGCE-202ENST00000415788 IGHV3-11P01762 117 aa11.19□□□□□ -0.62
SGCE-202ENST00000415788 CACNG8Q8WXS5 425 aa11.19□□□□□ -0.62
SGCE-202ENST00000415788 MRPL32Q9BYC8 188 aaKnown RBP11.19□□□□□ -0.62
SGCE-202ENST00000415788 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
SGCE-202ENST00000415788 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.18□□□□□ -0.62
SGCE-202ENST00000415788 A0A1W2PRX2 142 aa11.18□□□□□ -0.62
SGCE-202ENST00000415788 SPINK4O60575 86 aa11.18□□□□□ -0.62
SGCE-202ENST00000415788 FCGR2BP31994 310 aaPredicted RBP11.18□□□□□ -0.62
SGCE-202ENST00000415788 MRPL54Q6P161 138 aaKnown RBP11.18□□□□□ -0.62
SGCE-202ENST00000415788 ZNF502Q8TBZ5 544 aa11.18□□□□□ -0.62
SGCE-202ENST00000415788 FBN1P35555 2871 aaKnown RBP11.17□□□□□ -0.62
SGCE-202ENST00000415788 HSBP1O75506 76 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 NTF3P20783 257 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 CDKN1BP46527 198 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 MFAP4P55083 255 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 RBX1P62877 108 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 CD69Q07108 199 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 NSUN5P1Q3KNT7 163 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 OR4F17Q8NGA8 305 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 PEF1Q9UBV8 284 aaKnown RBP11.17□□□□□ -0.62
SGCE-202ENST00000415788 M0QZ24 198 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 OR7C2O60412 319 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 C8orf88P0DMB2 117 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 MGST1P10620 155 aaKnown RBP11.17□□□□□ -0.62
SGCE-202ENST00000415788 TCL1AP56279 114 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 RPS20P60866 119 aaKnown RBP11.17□□□□□ -0.62
SGCE-202ENST00000415788 HIST2H2BDQ6DRA6 164 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 C18orf65Q6ZTR6 163 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 C8orf86Q6ZUL3 223 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 ZNF503Q96F45 646 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 GRAMD2BQ96HH9 432 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 CCDC140Q96MF4 163 aa11.17□□□□□ -0.62
SGCE-202ENST00000415788 FNDC4Q9H6D8 234 aaPredicted RBP11.17□□□□□ -0.62
SGCE-202ENST00000415788 IGHV3-21A0A0B4J1V1 117 aa11.16□□□□□ -0.62
SGCE-202ENST00000415788 GGTLC3B5MD39 225 aa11.16□□□□□ -0.62
SGCE-202ENST00000415788 SCGB2A1O75556 95 aa11.16□□□□□ -0.62
SGCE-202ENST00000415788 UBE2G1P62253 170 aa11.16□□□□□ -0.62
SGCE-202ENST00000415788 COTL1Q14019 142 aa11.16□□□□□ -0.62
SGCE-202ENST00000415788 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
SGCE-202ENST00000415788 FAM19A2Q8N3H0 131 aa11.16□□□□□ -0.62
SGCE-202ENST00000415788 M0R2Z0 102 aa11.15□□□□□ -0.62
SGCE-202ENST00000415788 HINT1P49773 126 aaPredicted RBP11.15□□□□□ -0.62
SGCE-202ENST00000415788 Q56UQ5 140 aa11.15□□□□□ -0.62
SGCE-202ENST00000415788 CLEC19AQ6UXS0 136 aa11.15□□□□□ -0.62
SGCE-202ENST00000415788 S4R3C0 116 aa11.15□□□□□ -0.62
SGCE-202ENST00000415788 TRAV30A0A087WSZ9 112 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 CCL24O00175 119 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 IGHV3-23P01764 117 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 CLEC3BP05452 202 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 MYCNOSP40205 109 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 SLAQ13239 276 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 TMEM116Q8NCL8 245 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 OR11H1Q8NG94 326 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 RNASE8Q8TDE3 154 aaKnown RBP11.15□□□□□ -0.63
SGCE-202ENST00000415788 DPF1Q92782 380 aa11.15□□□□□ -0.63
SGCE-202ENST00000415788 TRAV34A0A0B4J273 112 aa11.14□□□□□ -0.63
SGCE-202ENST00000415788 LINC01619G3V211 115 aa11.14□□□□□ -0.63
SGCE-202ENST00000415788 GNG7O60262 68 aa11.14□□□□□ -0.63
SGCE-202ENST00000415788 GPR183P32249 361 aa11.14□□□□□ -0.63
SGCE-202ENST00000415788 FHL3Q13643 280 aa11.14□□□□□ -0.63
SGCE-202ENST00000415788 ALKBH7Q9BT30 221 aaPredicted RBP11.14□□□□□ -0.63
SGCE-202ENST00000415788 F8W735 103 aaPredicted RBP11.13□□□□□ -0.63
SGCE-202ENST00000415788 ARL3P36405 182 aa11.13□□□□□ -0.63
SGCE-202ENST00000415788 MLANAQ16655 118 aa11.13□□□□□ -0.63
SGCE-202ENST00000415788 DEFB136Q30KP8 78 aa11.13□□□□□ -0.63
SGCE-202ENST00000415788 SMIM12Q96EX1 92 aa11.13□□□□□ -0.63
SGCE-202ENST00000415788 RAX2Q96IS3 184 aa11.13□□□□□ -0.63
SGCE-202ENST00000415788 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
SGCE-202ENST00000415788 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
SGCE-202ENST00000415788 IGHV4OR15-8A0A075B7B6 117 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 A0A087WW49 117 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 OR2T8A6NH00 312 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 C2orf70A6NJV1 201 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 TRBV12-3P01733 135 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 IGHV3-48P01763 117 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 PF4P02776 101 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 HIST1H1EP10412 219 aaKnown RBP11.12□□□□□ -0.63
SGCE-202ENST00000415788 IGLL1P15814 213 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 EBLN2Q6P2I7 272 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 NUP35Q8NFH5 326 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 OR4C5Q8NGB2 326 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 TMEM70Q9BUB7 260 aa11.12□□□□□ -0.63
SGCE-202ENST00000415788 CRXO43186 299 aaPredicted RBP11.11□□□□□ -0.63
SGCE-202ENST00000415788 CTSGP08311 255 aa11.11□□□□□ -0.63
SGCE-202ENST00000415788 HOXD3P31249 432 aaPredicted RBP11.11□□□□□ -0.63
SGCE-202ENST00000415788 LCN12Q6JVE5 192 aa11.11□□□□□ -0.63
SGCE-202ENST00000415788 ATOH7Q8N100 152 aa11.11□□□□□ -0.63
SGCE-202ENST00000415788 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
SGCE-202ENST00000415788 UBE2L3P68036 154 aaKnown RBP11.1□□□□□ -0.63
SGCE-202ENST00000415788 RNASEKQ6P5S7 137 aaKnown RBP11.1□□□□□ -0.63
SGCE-202ENST00000415788 OR1L4Q8NGR5 311 aa11.1□□□□□ -0.63
SGCE-202ENST00000415788 CHCHD1Q96BP2 118 aaKnown RBP11.1□□□□□ -0.63
SGCE-202ENST00000415788 FAM167A-AS1Q96KT0 104 aa11.1□□□□□ -0.63
SGCE-202ENST00000415788 DUX3Q96PT4 197 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms