RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 METTL1Q9UBP6 276 aaKnown RBP3.39□□□□□ -1.87
LINC00343-202ENST00000415294 SMIM23A6NLE4 172 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 C15orf65H3BRN8 121 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 SULT1C2O00338 296 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 SLC22A1O15245 554 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 TNFAIP8O95379 198 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 IGLV3-1P01715 115 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 CTSDP07339 412 aaPredicted RBP3.38□□□□□ -1.87
LINC00343-202ENST00000415294 PPIBP23284 216 aaKnown RBP3.38□□□□□ -1.87
LINC00343-202ENST00000415294 RAB31Q13636 194 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 OR10J3Q5JRS4 329 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 SPATA24Q86W54 205 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 SLC35F6Q8N357 371 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 OR9I1Q8NGQ6 314 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 GPR84Q9NQS5 396 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 COMMD9Q9P000 198 aa3.38□□□□□ -1.87
LINC00343-202ENST00000415294 TMEM250H0YL14 139 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 H3BQ85 93 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 ISLRO14498 428 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 ATF1P18846 271 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 KDELR2P33947 212 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 Q6ZQT7 251 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 OR2T4Q8NH00 348 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 PGLYRP3Q96LB9 341 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 LINC01587Q99440 93 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 SHANK2-AS3Q9BTD1 123 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 ZNF436Q9C0F3 470 aaPredicted RBP3.37□□□□□ -1.87
LINC00343-202ENST00000415294 SPACA1Q9HBV2 294 aa3.37□□□□□ -1.87
LINC00343-202ENST00000415294 UTP11Q9Y3A2 253 aaKnown RBP3.37□□□□□ -1.87
LINC00343-202ENST00000415294 IGKV2-24A0A0C4DH68 120 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 COPEO14579 308 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 DEGS1O15121 323 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 ZNF682O95780 498 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 IGHV3-53P01767 116 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 GYPBP06028 91 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 MAGEA2P43356 314 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 POLR2JP52435 117 aaKnown RBP3.36□□□□□ -1.87
LINC00343-202ENST00000415294 OR10A3P58181 314 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 ZFP82Q8N141 532 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 LINC00304Q8N9R0 145 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 BPIFB6Q8NFQ5 453 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 ARL11Q969Q4 196 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 FAM206AQ9NX38 181 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 UFC1Q9Y3C8 167 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 URGCP-MRPS24S4R325 110 aa3.36□□□□□ -1.87
LINC00343-202ENST00000415294 IGKV3-7A0A075B6H7 116 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 IGKV1OR2-108A0A075B7D4 117 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 IGKV1-12A0A0C4DH73 117 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 TMEM189A5PLL7 270 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 EVPLLA8MZ36 301 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 H0YJX3 145 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 SULT1B1O43704 296 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 SOX14O95416 240 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 IGKV1D-12P01611 117 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 GZMHP20718 246 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 OMPP47874 163 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 DEFB131AP59861 70 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 DAD1P61803 113 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 ESRGQ1W209 222 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 ZNF833PQ6ZTB9 187 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 DUSP21Q9H596 190 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 POMPQ9Y244 141 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 PUS1Q9Y606 427 aaKnown RBP eCLIP3.35□□□□□ -1.87
LINC00343-202ENST00000415294 ICOSQ9Y6W8 199 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 V9GYS6 101 aa3.35□□□□□ -1.87
LINC00343-202ENST00000415294 CYB5AP00167 134 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 LIMS3P0CW19 117 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 LIMS4P0CW20 117 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 SAA2P0DJI9 122 aaPredicted RBP3.34□□□□□ -1.87
LINC00343-202ENST00000415294 IDO1P14902 403 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 LINC01590Q5TEZ4 76 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 SELENOHQ8IZQ5 122 aaKnown RBP3.34□□□□□ -1.87
LINC00343-202ENST00000415294 GATD1Q8NB37 220 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 BORCS8Q96FH0 119 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 LINC01600Q96MT4 127 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 PHB2Q99623 299 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 C20orf27Q9GZN8 174 aa3.34□□□□□ -1.87
LINC00343-202ENST00000415294 MRPS16Q9Y3D3 137 aaKnown RBP3.34□□□□□ -1.87
LINC00343-202ENST00000415294 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
LINC00343-202ENST00000415294 TRAV3A0A0B4J244 114 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 TMEM269A0A1B0GVZ9 245 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 OR5H14A6NHG9 310 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 ZNF705FA8MVS1 300 aaPredicted RBP3.33□□□□□ -1.88
LINC00343-202ENST00000415294 F5H768 121 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 TTRP02766 147 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 ZNF705DP0CH99 300 aaPredicted RBP3.33□□□□□ -1.88
LINC00343-202ENST00000415294 ZNF705BP0CI00 300 aaPredicted RBP3.33□□□□□ -1.88
LINC00343-202ENST00000415294 ZNF3P17036 446 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 SPI1P17947 270 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 RPL14P50914 215 aaKnown RBP3.33□□□□□ -1.88
LINC00343-202ENST00000415294 AMMECR1LQ6DCA0 310 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 ZNF705AQ6ZN79 300 aaPredicted RBP3.33□□□□□ -1.88
LINC00343-202ENST00000415294 FAM24BQ8N5W8 94 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 Q8N814 137 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 THEM6Q8WUY1 208 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 TVP23CQ96ET8 276 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 DPH3P1Q9H4G8 78 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 WASHC3Q9Y3C0 194 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 R4GN34 69 aa3.33□□□□□ -1.88
LINC00343-202ENST00000415294 TRPC5OSA6NMA1 111 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms