RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 HIST1H2BKO60814 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST1H2BJP06899 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 TRGC1P0CF51 173 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 CBLN1P23435 193 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST1H2BOP23527 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST1H2BBP33778 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 TCL1AP56279 114 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST1H2BDP58876 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST1H2BCP62807 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST2H2BEQ16778 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.13□□□□□ -0.63
RBBP4-204ENST00000414241 ATP5L2Q7Z4Y8 100 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 OR2D3Q8NGH3 330 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 FRZBQ92765 325 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST1H2BHQ93079 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 LINC00477Q96M19 166 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 NEU1Q99519 415 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST1H2BNQ99877 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIST1H2BMQ99879 126 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 XKRY2A2RUG3 117 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 C2orf70A6NJV1 201 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 CRIP1P50238 77 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
RBBP4-204ENST00000414241 KHDC1LQ5JSQ8 128 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 KLHL30-AS1Q8NEE0 82 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 NUP35Q8NFH5 326 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 OR10J6PQ8NGY7 276 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 C8orf49Q96NF6 230 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 AGPAT4-IT1Q9H0P7 198 aa11.13□□□□□ -0.63
RBBP4-204ENST00000414241 HIGD1CA8MV81 97 aa11.12□□□□□ -0.63
RBBP4-204ENST00000414241 RPS20P60866 119 aaKnown RBP11.12□□□□□ -0.63
RBBP4-204ENST00000414241 SRSF2Q01130 221 aaKnown RBP11.12□□□□□ -0.63
RBBP4-204ENST00000414241 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
RBBP4-204ENST00000414241 ERCC8Q13216 396 aa11.12□□□□□ -0.63
RBBP4-204ENST00000414241 Q6AWC8 147 aa11.12□□□□□ -0.63
RBBP4-204ENST00000414241 RBPMS2Q6ZRY4 209 aaKnown RBP11.12□□□□□ -0.63
RBBP4-204ENST00000414241 ASCL2Q99929 193 aa11.12□□□□□ -0.63
RBBP4-204ENST00000414241 SNRPEP62304 92 aaKnown RBP11.11□□□□□ -0.63
RBBP4-204ENST00000414241 Q8TAT8 98 aa11.11□□□□□ -0.63
RBBP4-204ENST00000414241 C20orf173Q96LM9 149 aa11.11□□□□□ -0.63
RBBP4-204ENST00000414241 TRBV7-9A0A0J9YWB2 115 aa11.11□□□□□ -0.63
RBBP4-204ENST00000414241 FABP5P3A8MUU1 101 aa11.11□□□□□ -0.63
RBBP4-204ENST00000414241 SH2D1AO60880 128 aa11.11□□□□□ -0.63
RBBP4-204ENST00000414241 PAFAH1B2P68402 229 aa11.11□□□□□ -0.63
RBBP4-204ENST00000414241 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
RBBP4-204ENST00000414241 TSSC4Q9Y5U2 329 aaPredicted RBP11.11□□□□□ -0.63
RBBP4-204ENST00000414241 TMEM189A5PLL7 270 aa11.1□□□□□ -0.63
RBBP4-204ENST00000414241 UBE2CO00762 179 aa11.1□□□□□ -0.63
RBBP4-204ENST00000414241 HLA-DQA1P01909 254 aa11.1□□□□□ -0.63
RBBP4-204ENST00000414241 SLURP1P55000 103 aa11.1□□□□□ -0.63
RBBP4-204ENST00000414241 NDUFA6P56556 154 aa11.1□□□□□ -0.63
RBBP4-204ENST00000414241 C18orf65Q6ZTR6 163 aa11.1□□□□□ -0.63
RBBP4-204ENST00000414241 OR9G4Q8NGQ1 327 aa11.1□□□□□ -0.63
RBBP4-204ENST00000414241 MS4A6AQ9H2W1 248 aa11.1□□□□□ -0.63
RBBP4-204ENST00000414241 SNURFLB1AK76 121 aa11.09□□□□□ -0.63
RBBP4-204ENST00000414241 TCF21O43680 179 aa11.09□□□□□ -0.63
RBBP4-204ENST00000414241 SNRPD3P62318 126 aaKnown RBP11.09□□□□□ -0.63
RBBP4-204ENST00000414241 GTSF1Q8WW33 167 aa11.09□□□□□ -0.63
RBBP4-204ENST00000414241 GPR61Q9BZJ8 451 aa11.09□□□□□ -0.63
RBBP4-204ENST00000414241 MRPL18Q9H0U6 180 aaKnown RBP11.09□□□□□ -0.63
RBBP4-204ENST00000414241 IGKV3-7A0A075B6H7 116 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 SPINK4O60575 86 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
RBBP4-204ENST00000414241 EDN2P20800 178 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 HIST1H1AQ02539 215 aaPredicted RBP11.08□□□□□ -0.64
RBBP4-204ENST00000414241 DEFB136Q30KP8 78 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 MRPL54Q6P161 138 aaKnown RBP11.08□□□□□ -0.64
RBBP4-204ENST00000414241 TMEM136Q6ZRR5 245 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 OR8A1Q8NGG7 326 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 TLN2Q9Y4G6 2542 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 TRAV2A0A0B4J234 112 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 A0A1B0GW15 77 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 K7EQG2 157 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 CD28P10747 220 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 HOXA5P20719 270 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 Q71RC1 249 aaPredicted RBP11.08□□□□□ -0.64
RBBP4-204ENST00000414241 RNF114Q9Y508 228 aa11.08□□□□□ -0.64
RBBP4-204ENST00000414241 ZNF469Q96JG9 3925 aaPredicted RBP11.07□□□□□ -0.64
RBBP4-204ENST00000414241 ZFHX3Q15911 3703 aa11.07□□□□□ -0.64
RBBP4-204ENST00000414241 A0A1B0GXF2 115 aa11.07□□□□□ -0.64
RBBP4-204ENST00000414241 INAFM1C9JVW0 142 aa11.07□□□□□ -0.64
RBBP4-204ENST00000414241 S100A8P05109 93 aa11.07□□□□□ -0.64
RBBP4-204ENST00000414241 HBBP68871 147 aa11.07□□□□□ -0.64
RBBP4-204ENST00000414241 FHL3Q13643 280 aa11.07□□□□□ -0.64
RBBP4-204ENST00000414241 COA6Q5JTJ3 125 aaKnown RBP11.07□□□□□ -0.64
RBBP4-204ENST00000414241 BORCS7Q96B45 105 aa11.07□□□□□ -0.64
RBBP4-204ENST00000414241 PGLYRP4Q96LB8 373 aa11.07□□□□□ -0.64
RBBP4-204ENST00000414241 HAX1O00165 279 aa11.06□□□□□ -0.64
RBBP4-204ENST00000414241 ZNF80P51504 273 aaPredicted RBP11.06□□□□□ -0.64
RBBP4-204ENST00000414241 RAB4BP61018 213 aa11.06□□□□□ -0.64
RBBP4-204ENST00000414241 RIGQ13278 110 aa11.06□□□□□ -0.64
RBBP4-204ENST00000414241 DLX4Q92988 240 aaPredicted RBP11.06□□□□□ -0.64
RBBP4-204ENST00000414241 CCL24O00175 119 aa11.05□□□□□ -0.64
RBBP4-204ENST00000414241 PROK1P58294 105 aa11.05□□□□□ -0.64
RBBP4-204ENST00000414241 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
RBBP4-204ENST00000414241 WFDC3Q8IUB2 231 aa11.05□□□□□ -0.64
RBBP4-204ENST00000414241 RAX2Q96IS3 184 aa11.05□□□□□ -0.64
RBBP4-204ENST00000414241 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
RBBP4-204ENST00000414241 AKAP9Q99996 3911 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms