RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 HIST2H2BDQ6DRA6 164 aa6.2□□□□□ -1.42
HDAC9-207ENST00000413509 LINC00322Q6ZN03 302 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-207ENST00000413509 PRNTQ86SH4 94 aa6.2□□□□□ -1.42
HDAC9-207ENST00000413509 NHLRC2Q8NBF2 726 aa6.2□□□□□ -1.42
HDAC9-207ENST00000413509 ZC2HC1AQ96GY0 325 aa6.2□□□□□ -1.42
HDAC9-207ENST00000413509 SGK494Q96LW2 274 aa6.2□□□□□ -1.42
HDAC9-207ENST00000413509 DUX3Q96PT4 197 aa6.2□□□□□ -1.42
HDAC9-207ENST00000413509 PRR25Q96S07 402 aa6.2□□□□□ -1.42
HDAC9-207ENST00000413509 MS4A6AQ9H2W1 248 aa6.2□□□□□ -1.42
HDAC9-207ENST00000413509 FBN1P35555 2871 aaKnown RBP6.2□□□□□ -1.42
HDAC9-207ENST00000413509 ANK2Q01484 3957 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 TRBV7-9A0A0J9YWB2 115 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 SMIM27A0A1W2PRY6 76 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 M0QZ24 198 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 OVOL1O14753 267 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 MGST1P10620 155 aaKnown RBP6.19□□□□□ -1.42
HDAC9-207ENST00000413509 CRIP1P50238 77 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 ERVFC1-1P60608 527 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 SAPCD1Q5SSQ6 148 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 IBA57Q5T440 356 aaKnown RBP6.19□□□□□ -1.42
HDAC9-207ENST00000413509 FAM24BQ8N5W8 94 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.19□□□□□ -1.42
HDAC9-207ENST00000413509 C11orf44Q8N8P7 122 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 NUDT10Q8NFP7 164 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 NUDT11Q96G61 164 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 FAM19A4Q96LR4 140 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 GPR61Q9BZJ8 451 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 AGPAT4-IT1Q9H0P7 198 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 RNASE7Q9H1E1 156 aaKnown RBP6.19□□□□□ -1.42
HDAC9-207ENST00000413509 IL36BQ9NZH7 164 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 LENEPQ9Y5L5 61 aa6.19□□□□□ -1.42
HDAC9-207ENST00000413509 TGIF2-C20orf24A0A0A6YYL0 155 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 TRAV25A0A0B4J276 109 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 TYMSP04818 313 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 CXCL1P09341 107 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 RAB5AP20339 215 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 ID1P41134 155 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 ZNF138P52744 262 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 ERCC8Q13216 396 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 DEFB114Q30KQ6 69 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 APRG1Q8IVJ8 170 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 GBGT1Q8N5D6 347 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.18□□□□□ -1.42
HDAC9-207ENST00000413509 ZNF738Q8NE65 137 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 OR4B1Q8NGF8 309 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 C8orf49Q96NF6 230 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 CITED1Q99966 193 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
HDAC9-207ENST00000413509 FAM231BA6NCW3 169 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 A8MTW9 85 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 PHOX2AO14813 284 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 S100PP25815 95 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 RPL11P62913 178 aaKnown RBP6.17□□□□□ -1.42
HDAC9-207ENST00000413509 KCNIP4Q6PIL6 250 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 TMEM61Q8N0U2 210 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 OR8A1Q8NGG7 326 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 Q8TAT8 98 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 TSKUQ8WUA8 353 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 LINC00477Q96M19 166 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 ODF3Q96PU9 254 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 RPP21Q9H633 154 aaKnown RBP6.17□□□□□ -1.42
HDAC9-207ENST00000413509 URGCP-MRPS24S4R325 110 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 SORL1Q92673 2214 aa6.17□□□□□ -1.42
HDAC9-207ENST00000413509 STAB1Q9NY15 2570 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 GATCO43716 136 aaKnown RBP6.16□□□□□ -1.42
HDAC9-207ENST00000413509 P01737 135 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 CT45A10P0DMU9 189 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 PRB4P10163 310 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-207ENST00000413509 CRISP2P16562 243 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 ZNF80P51504 273 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-207ENST00000413509 FOXA3P55318 350 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-207ENST00000413509 SNRPD3P62318 126 aaKnown RBP6.16□□□□□ -1.42
HDAC9-207ENST00000413509 SMUG1Q53HV7 270 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 FAM162BQ5T6X4 162 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 TMEM78Q5T7P6 136 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 PRR27Q6MZM9 219 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 ZNF575Q86XF7 245 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 ZFAND2AQ8N6M9 145 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 LINC00482Q8N8I6 264 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 OR10J6PQ8NGY7 276 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 BTF3L4Q96K17 158 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 FAM210BQ96KR6 192 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 ASCL2Q99929 193 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 SPAG8Q99932 426 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-207ENST00000413509 NDFIP1Q9BT67 221 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 GFRA4Q9GZZ7 299 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 ZNF256Q9Y2P7 627 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-207ENST00000413509 TRRAPQ9Y4A5 3859 aa6.16□□□□□ -1.42
HDAC9-207ENST00000413509 A0A0J9YX75 114 aa6.15□□□□□ -1.42
HDAC9-207ENST00000413509 ZNF705GA8MUZ8 300 aaPredicted RBP6.15□□□□□ -1.42
HDAC9-207ENST00000413509 A8MWL6 223 aa6.15□□□□□ -1.42
HDAC9-207ENST00000413509 SH2D1AO60880 128 aa6.15□□□□□ -1.42
HDAC9-207ENST00000413509 FAM3BP58499 235 aaPredicted RBP6.15□□□□□ -1.42
HDAC9-207ENST00000413509 DEFB1P60022 68 aa6.15□□□□□ -1.42
HDAC9-207ENST00000413509 PAFAH1B2P68402 229 aa6.15□□□□□ -1.42
HDAC9-207ENST00000413509 NSUN5P1Q3KNT7 163 aa6.15□□□□□ -1.42
HDAC9-207ENST00000413509 CD300EQ496F6 205 aaPredicted RBP6.15□□□□□ -1.42
HDAC9-207ENST00000413509 OR2K2Q8NGT1 345 aa6.15□□□□□ -1.42
HDAC9-207ENST00000413509 DYNLRB2Q8TF09 96 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms