RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 WIPF2Q8TF74 440 aaPredicted RBP13.08□□□□□ -0.32
PTPRC-206ENST00000413409 METTL26Q96S19 204 aa13.08□□□□□ -0.32
PTPRC-206ENST00000413409 U3KQE9 123 aa13.08□□□□□ -0.32
PTPRC-206ENST00000413409 BUB3O43684 328 aa13.07□□□□□ -0.32
PTPRC-206ENST00000413409 IGLV1-40P01703 118 aa13.07□□□□□ -0.32
PTPRC-206ENST00000413409 CBLN1P23435 193 aa13.07□□□□□ -0.32
PTPRC-206ENST00000413409 C16orf54Q6UWD8 224 aa13.07□□□□□ -0.32
PTPRC-206ENST00000413409 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
PTPRC-206ENST00000413409 GBGT1Q8N5D6 347 aa13.07□□□□□ -0.32
PTPRC-206ENST00000413409 MRPL18Q9H0U6 180 aaKnown RBP13.07□□□□□ -0.32
PTPRC-206ENST00000413409 NAT8BQ9UHF3 227 aa13.07□□□□□ -0.32
PTPRC-206ENST00000413409 PSG8Q9UQ74 426 aa13.07□□□□□ -0.32
PTPRC-206ENST00000413409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.06□□□□□ -0.32
PTPRC-206ENST00000413409 TRAV8-1A0A0A6YYK1 113 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 FAM231BA6NCW3 169 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 SNURFLB1AK76 121 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 P01737 135 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 HLA-DQA1P01909 254 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 TCL1AP56279 114 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 DEFB121Q5J5C9 76 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 FAM209BQ5JX69 171 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 LCE2DQ5TA82 110 aaPredicted RBP13.06□□□□□ -0.32
PTPRC-206ENST00000413409 PRNTQ86SH4 94 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 SGK494Q96LW2 274 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 LYSTQ99698 3801 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 SLC50A1Q9BRV3 221 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 GFRA4Q9GZZ7 299 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 SMAD5-AS1Q9Y6J3 95 aa13.06□□□□□ -0.32
PTPRC-206ENST00000413409 DNAH7Q8WXX0 4024 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 STAB2Q8WWQ8 2551 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 A0A0G2JLM5 398 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 A8MWL6 223 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 ARL3P36405 182 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 GFI1BQ5VTD9 330 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 TMEM136Q6ZRR5 245 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 COX8CQ7Z4L0 72 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 DAZAP1Q96EP5 407 aaKnown RBP13.05□□□□□ -0.32
PTPRC-206ENST00000413409 GPR61Q9BZJ8 451 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 ZNF331Q9NQX6 463 aaPredicted RBP13.05□□□□□ -0.32
PTPRC-206ENST00000413409 LINC00527Q9UJ94 153 aa13.05□□□□□ -0.32
PTPRC-206ENST00000413409 IGHV3-35A0A0C4DH35 117 aa13.04□□□□□ -0.32
PTPRC-206ENST00000413409 M0R3E3 92 aa13.04□□□□□ -0.32
PTPRC-206ENST00000413409 NDUFA4O00483 81 aa13.04□□□□□ -0.32
PTPRC-206ENST00000413409 CA1P00915 261 aaPredicted RBP13.04□□□□□ -0.32
PTPRC-206ENST00000413409 BLCAPP62952 87 aa13.04□□□□□ -0.32
PTPRC-206ENST00000413409 MRPL53Q96EL3 112 aaKnown RBP13.04□□□□□ -0.32
PTPRC-206ENST00000413409 NOL4LQ96MY1 436 aaPredicted RBP13.04□□□□□ -0.32
PTPRC-206ENST00000413409 NEU1Q99519 415 aa13.04□□□□□ -0.32
PTPRC-206ENST00000413409 HYDINQ4G0P3 5121 aa13.03□□□□□ -0.32
PTPRC-206ENST00000413409 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.03□□□□□ -0.32
PTPRC-206ENST00000413409 LINC00322Q6ZN03 302 aaPredicted RBP13.03□□□□□ -0.32
PTPRC-206ENST00000413409 NUP35Q8NFH5 326 aa13.03□□□□□ -0.32
PTPRC-206ENST00000413409 VPREB3Q9UKI3 123 aa13.03□□□□□ -0.32
PTPRC-206ENST00000413409 CHEK1O14757 476 aa13.02□□□□□ -0.33
PTPRC-206ENST00000413409 PF4V1P10720 104 aa13.02□□□□□ -0.33
PTPRC-206ENST00000413409 MRPL54Q6P161 138 aaKnown RBP13.02□□□□□ -0.33
PTPRC-206ENST00000413409 ZC2HC1AQ96GY0 325 aa13.02□□□□□ -0.33
PTPRC-206ENST00000413409 HIST1H2BLQ99880 126 aa13.02□□□□□ -0.33
PTPRC-206ENST00000413409 CLEC5AQ9NY25 188 aa13.02□□□□□ -0.33
PTPRC-206ENST00000413409 IGHV3OR16-8A0A075B7F1 116 aa13.01□□□□□ -0.33
PTPRC-206ENST00000413409 A0A1B0GXF2 115 aa13.01□□□□□ -0.33
PTPRC-206ENST00000413409 ZNF785A8K8V0 405 aa13.01□□□□□ -0.33
PTPRC-206ENST00000413409 HIGD1CA8MV81 97 aa13.01□□□□□ -0.33
PTPRC-206ENST00000413409 IGLL1P15814 213 aa13.01□□□□□ -0.33
PTPRC-206ENST00000413409 NSUN5P1Q3KNT7 163 aa13.01□□□□□ -0.33
PTPRC-206ENST00000413409 DNLZQ5SXM8 178 aa13.01□□□□□ -0.33
PTPRC-206ENST00000413409 RBAKDNA6NC62 111 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 IGHG4P01861 327 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 CT45A10P0DMU9 189 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 FABP4P15090 132 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 KRTAP10-11P60412 298 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 Q0VG73 95 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 PDZD11Q5EBL8 140 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 SAPCD1Q5SSQ6 148 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 Q6ZS46 218 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 OR10D4PQ8NGN7 298 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 GLMPQ8WWB7 406 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 PACRGQ96M98 296 aaPredicted RBP13□□□□□ -0.33
PTPRC-206ENST00000413409 B9D2Q9BPU9 175 aa13□□□□□ -0.33
PTPRC-206ENST00000413409 AMBPP02760 352 aa12.99□□□□□ -0.33
PTPRC-206ENST00000413409 FRMD6-AS1P0C7T7 363 aa12.99□□□□□ -0.33
PTPRC-206ENST00000413409 ESDP10768 282 aa12.99□□□□□ -0.33
PTPRC-206ENST00000413409 CRISP2P16562 243 aa12.99□□□□□ -0.33
PTPRC-206ENST00000413409 SLC35B1P78383 322 aa12.99□□□□□ -0.33
PTPRC-206ENST00000413409 RBPMS2Q6ZRY4 209 aaKnown RBP12.99□□□□□ -0.33
PTPRC-206ENST00000413409 KLHDC1Q8N7A1 406 aa12.99□□□□□ -0.33
PTPRC-206ENST00000413409 IGKV2-40A0A087WW87 121 aaPredicted RBP12.98□□□□□ -0.33
PTPRC-206ENST00000413409 SPINK4O60575 86 aa12.98□□□□□ -0.33
PTPRC-206ENST00000413409 IGKV2D-40P01614 121 aaPredicted RBP12.98□□□□□ -0.33
PTPRC-206ENST00000413409 FOXA3P55318 350 aaPredicted RBP12.98□□□□□ -0.33
PTPRC-206ENST00000413409 Q6AWC8 147 aa12.98□□□□□ -0.33
PTPRC-206ENST00000413409 OR4X2Q8NGF9 303 aa12.98□□□□□ -0.33
PTPRC-206ENST00000413409 OR2D3Q8NGH3 330 aa12.98□□□□□ -0.33
PTPRC-206ENST00000413409 TMEM18Q96B42 140 aa12.98□□□□□ -0.33
PTPRC-206ENST00000413409 KLK15Q9H2R5 256 aa12.98□□□□□ -0.33
PTPRC-206ENST00000413409 ADARB2-AS1A8MUL3 147 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 C3orf84H3BNL1 204 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 TRBV12-3P01733 135 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 APCSP02743 223 aa12.97□□□□□ -0.33
PTPRC-206ENST00000413409 APOHP02749 345 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms