RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CLEC19AQ6UXS0 136 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 CD177Q8N6Q3 437 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 SLC25A39Q9BZJ4 359 aaPredicted RBP6.85□□□□□ -1.31
PBRM1-209ENST00000412587 PRSS22Q9GZN4 317 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 IGHV3OR16-8A0A075B7F1 116 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 S100A7L2Q5SY68 101 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 METRNQ9UJH8 293 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 HIST1H4AP62805 103 aaKnown RBP6.85□□□□□ -1.31
PBRM1-209ENST00000412587 TCF15Q12870 199 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 NCR2O95944 276 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 TMEM200BQ69YZ2 307 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 PHLDA3Q9Y5J5 127 aa6.85□□□□□ -1.31
PBRM1-209ENST00000412587 TRAV25A0A0B4J276 109 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 IGHV3-66A0A0C4DH42 116 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 IGKV3-20P01619 116 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 TCRAP04437 139 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 INAFM2P0DMQ5 153 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 IGHV1-8P0DP01 117 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 FGF6P10767 208 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 XGP55808 180 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 DKK2Q9UBU2 259 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 VPREB3Q9UKI3 123 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 CRXO43186 299 aaPredicted RBP6.84□□□□□ -1.31
PBRM1-209ENST00000412587 SHANK1Q9Y566 2161 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 TRAV13-1A0A0B4J241 112 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 CENPVL3A0A0U1RRI6 287 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 B4DSR2 109 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 E7EQL1 145 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 NDUFS7O75251 213 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 CD69Q07108 199 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 ZNF329Q86UD4 541 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 RNF166Q96A37 237 aaPredicted RBP6.84□□□□□ -1.31
PBRM1-209ENST00000412587 HELZP42694 1942 aaKnown RBP6.84□□□□□ -1.31
PBRM1-209ENST00000412587 KIAA1671Q9BY89 1806 aa6.84□□□□□ -1.31
PBRM1-209ENST00000412587 TRAV8-3A0A0A6YYJ7 113 aa6.84□□□□□ -1.32
PBRM1-209ENST00000412587 LY6HO94772 140 aa6.84□□□□□ -1.32
PBRM1-209ENST00000412587 WISP1O95388 367 aa6.84□□□□□ -1.32
PBRM1-209ENST00000412587 ARMS2P0C7Q2 107 aa6.84□□□□□ -1.32
PBRM1-209ENST00000412587 SYNJ2BPP57105 145 aa6.84□□□□□ -1.32
PBRM1-209ENST00000412587 LYZL1Q6UWQ5 148 aa6.84□□□□□ -1.32
PBRM1-209ENST00000412587 CSDC2Q9Y534 153 aaKnown RBP6.84□□□□□ -1.32
PBRM1-209ENST00000412587 TRBV6-6A0A0A6YYG2 114 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 RHODO00212 210 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 HERVK_113P63121 156 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 PRCDQ00LT1 54 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 TMEM219Q86XT9 240 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 TP73-AS1Q9UF72 201 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 FAM53AQ6NSI3 398 aaPredicted RBP6.83□□□□□ -1.32
PBRM1-209ENST00000412587 Q8N976 141 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 RNF114Q9Y508 228 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 PLXNA2O75051 1894 aa6.83□□□□□ -1.32
PBRM1-209ENST00000412587 NUP210Q8TEM1 1887 aaPredicted RBP6.83□□□□□ -1.32
PBRM1-209ENST00000412587 FRMD6-AS1P0C7T7 363 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 TMEM258P61165 79 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 C3orf22Q8N5N4 141 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 IGKV1D-17A0A075B6S4 117 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 NDUFA7O95182 113 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 COL8A2P25067 703 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 Q6P435 159 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 ZNF524Q96C55 264 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 GAFA1Q96PS6 74 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 C11orf1Q9H5F2 150 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 DOCK10Q96BY6 2186 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 A0A1W2PRX2 142 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 OOSP1A8MZH6 123 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 NPC2P61916 151 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 VMO1Q7Z5L0 202 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 CHCHD5Q9BSY4 110 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 PKIGQ9Y2B9 76 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 SRSF2Q01130 221 aaKnown RBP6.82□□□□□ -1.32
PBRM1-209ENST00000412587 MINOS1Q5TGZ0 78 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 RNF182Q8N6D2 247 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 GATD1Q8NB37 220 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 MINOS1-NBL1R4GNA1 71 aa6.82□□□□□ -1.32
PBRM1-209ENST00000412587 C10orf55Q5SWW7 151 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 BPESC1Q9GZL8 116 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 MRPL35Q9NZE8 188 aaKnown RBP6.81□□□□□ -1.32
PBRM1-209ENST00000412587 HLA-DRB4P13762 266 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 LRRK1Q38SD2 2015 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 PVRIGQ6DKI7 326 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 NRGNQ92686 78 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 MOB4Q9Y3A3 225 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 HLA-DRB4X5D2U9 266 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 IGHV1-3A0A0C4DH29 117 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 M0R1W7 72 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 MYOD1P15172 320 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 SP5Q6BEB4 398 aaPredicted RBP6.81□□□□□ -1.32
PBRM1-209ENST00000412587 Q6Q795 121 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 LINC00527Q9UJ94 153 aa6.81□□□□□ -1.32
PBRM1-209ENST00000412587 CD7P09564 240 aa6.8□□□□□ -1.32
PBRM1-209ENST00000412587 WT1P19544 449 aaPredicted RBP6.8□□□□□ -1.32
PBRM1-209ENST00000412587 LYPD2Q6UXB3 125 aa6.8□□□□□ -1.32
PBRM1-209ENST00000412587 C2orf91Q6ZV80 131 aa6.8□□□□□ -1.32
PBRM1-209ENST00000412587 LYPD6Q86Y78 171 aa6.8□□□□□ -1.32
PBRM1-209ENST00000412587 PLEKHB2Q96CS7 222 aa6.8□□□□□ -1.32
PBRM1-209ENST00000412587 RNF125Q96EQ8 232 aa6.8□□□□□ -1.32
PBRM1-209ENST00000412587 MALRD1Q5VYJ5 2156 aa6.8□□□□□ -1.32
PBRM1-209ENST00000412587 IGKV1-39P01597 117 aa6.8□□□□□ -1.32
PBRM1-209ENST00000412587 IGKV1D-39P04432 117 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms