RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 NRARPQ7Z6K4 114 aa9.7□□□□□ -0.86
HLA-DQB2-229ENST00000411527 OR1L4Q8NGR5 311 aa9.7□□□□□ -0.86
HLA-DQB2-229ENST00000411527 MRPL53Q96EL3 112 aaKnown RBP9.7□□□□□ -0.86
HLA-DQB2-229ENST00000411527 ST6GAL2Q96JF0 529 aa9.7□□□□□ -0.86
HLA-DQB2-229ENST00000411527 LINC00477Q96M19 166 aa9.7□□□□□ -0.86
HLA-DQB2-229ENST00000411527 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
HLA-DQB2-229ENST00000411527 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
HLA-DQB2-229ENST00000411527 TRBV19A0A075B6N1 114 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 TRAV9-2A0A087WT02 112 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 L7N2F9 121 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 ZNF253O75346 499 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 SMR3BP02814 79 aaPredicted RBP9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 GPX1P07203 203 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 VAMP2P63027 116 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 FAM19A4Q96LR4 140 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 PFDN5Q99471 154 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 MRPL16Q9NX20 251 aaKnown RBP9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 TP53TG3Q9ULZ0 132 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
HLA-DQB2-229ENST00000411527 PRAF2O60831 178 aa9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 BCAP31P51572 246 aa9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 CRYBA4P53673 196 aa9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 SLAQ13239 276 aa9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 MRPL23Q16540 153 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 C12orf45Q8N5I9 185 aaPredicted RBP9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 C8orf49Q96NF6 230 aa9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 SRRQ9GZT4 340 aa9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 PRELID1Q9Y255 219 aa9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 LY96Q9Y6Y9 160 aa9.68□□□□□ -0.86
HLA-DQB2-229ENST00000411527 RGS13O14921 159 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 CST7O76096 145 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 NDUFB4O95168 129 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 CAV2P51636 162 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 FHL2Q14192 279 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 ICAM4Q14773 271 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 BAK1Q16611 211 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 SPANXN2Q5MJ10 180 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 IBA57Q5T440 356 aaKnown RBP9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 TRIQKQ629K1 86 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 NEGR1Q7Z3B1 354 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 MITD1Q8WV92 249 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 UQCC1Q9NVA1 299 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 MSRB1Q9NZV6 116 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 WDR83OSQ9Y284 106 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 LSM5Q9Y4Y9 91 aaKnown RBP9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 TIMM9Q9Y5J7 89 aa9.67□□□□□ -0.86
HLA-DQB2-229ENST00000411527 CCSO14618 274 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 HIST1H1EP10412 219 aaKnown RBP9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 CRISP2P16562 243 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 GCSHP23434 173 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 RPL29P47914 159 aaKnown RBP9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 ZNF846Q147U1 533 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 Q6ZQT7 251 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 C9orf47Q6ZRZ4 202 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 EXOC3-AS1Q8N2X6 119 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 BLNKQ8WV28 456 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 VGLL1Q99990 258 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 KRTAP3-3Q9BYR6 98 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 C20orf85Q9H1P6 137 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 SLC39A9Q9NUM3 307 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 TMEM14CQ9P0S9 112 aa9.66□□□□□ -0.86
HLA-DQB2-229ENST00000411527 IGHV1OR15-1A0A075B7D0 117 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 FAM24AA6NFZ4 105 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 CCDC160A6NGH7 325 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 E5RGE8 158 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 NMBP08949 121 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 PYYP10082 97 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 BAXQ07812 192 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 TMEM78Q5T7P6 136 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 PRR9Q5T870 116 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 WFDC10BQ8IUB3 73 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 ZFAND2AQ8N6M9 145 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 ARPC5LQ9BPX5 153 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 MRPL32Q9BYC8 188 aaKnown RBP9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 AAMDCQ9H7C9 122 aa9.65□□□□□ -0.86
HLA-DQB2-229ENST00000411527 VPS13BQ7Z7G8 4022 aa9.65□□□□□ -0.87
HLA-DQB2-229ENST00000411527 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 TRGV4A0A0C4DH28 118 aa9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 UBE2L5PA0A1B0GUS4 154 aa9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 CENPXA8MT69 81 aa9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 FAM25EA8MYX2 175 aa9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 EVI2AP22794 236 aa9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 BTCP35070 178 aa9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 PDE6HQ13956 83 aa9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 VWC2Q2TAL6 325 aa9.64□□□□□ -0.87
HLA-DQB2-229ENST00000411527 FLG2Q5D862 2391 aaPredicted RBP9.63□□□□□ -0.87
HLA-DQB2-229ENST00000411527 K7EP13 123 aa9.63□□□□□ -0.87
HLA-DQB2-229ENST00000411527 K7EQD1 137 aa9.63□□□□□ -0.87
HLA-DQB2-229ENST00000411527 SRIP30626 198 aa9.63□□□□□ -0.87
HLA-DQB2-229ENST00000411527 HAMPP81172 84 aa9.63□□□□□ -0.87
HLA-DQB2-229ENST00000411527 ZNF415Q09FC8 603 aa9.63□□□□□ -0.87
HLA-DQB2-229ENST00000411527 FAM122CQ6P4D5 195 aa9.63□□□□□ -0.87
HLA-DQB2-229ENST00000411527 C11orf1Q9H5F2 150 aa9.63□□□□□ -0.87
HLA-DQB2-229ENST00000411527 ZNF492Q9P255 531 aa9.63□□□□□ -0.87
HLA-DQB2-229ENST00000411527 C5orf51A6NDU8 294 aa9.62□□□□□ -0.87
HLA-DQB2-229ENST00000411527 SFTA3P0C7M3 94 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms