RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 VPS36Q86VN1 386 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 HOMER1Q86YM7 354 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 TUSC5Q8IXB3 177 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 SLC7A5P1Q8MH63 180 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 TRAM1L1Q8N609 369 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 SERP2Q8N6R1 65 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 Q8NFD4 153 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 NINJ1Q92982 152 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 EFHD2Q96C19 240 aaPredicted RBP-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 SEC62Q99442 399 aaKnown RBP-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 PHB2Q99623 299 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 SLC29A1Q99808 456 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 CIB1Q99828 191 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 ELOVL6Q9H5J4 265 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 PSENENQ9NZ42 101 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 COPZ2Q9P299 210 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 TEX14Q8IWB6 1497 aa-2.71□□□□□ -2.84
RNU4-88P-201ENST00000411220 ABCC11Q96J66 1382 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 A0A087WUJ7 227 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 A0A1B0GX12 115 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 hADV38S2A0JD32 116 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 H7C0C1 242 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 AIM2O14862 343 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 CTDSPLO15194 276 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 RAD51CO43502 376 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 HPRT1P00492 218 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 SLC35E2BP0CK96 405 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 ADCYAP1P18509 176 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 GABRR2P28476 465 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 MARCKSP29966 332 aaPredicted RBP-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 ANP32AP39687 249 aaKnown RBP-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 CBX5P45973 191 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 RAB13P51153 203 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 LINC00313P59037 77 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 YWHAGP61981 247 aaKnown RBP eCLIP-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 PAFAH1B2P68402 229 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 MRPS10P82664 201 aaKnown RBP-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 PDCD11Q14690 1871 aaKnown RBP-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 STK38Q15208 465 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 RHOHQ15669 191 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 LBHQ53QV2 105 aaPredicted RBP-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 HSP90AA4PQ58FG1 418 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 TTC32Q5I0X7 151 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 SPANXN3Q5MJ09 141 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 FKBP1CQ5VVH2 108 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 C10orf113Q5VZT2 155 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 SLC25A26Q70HW3 274 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 C6orf201Q7Z4U5 140 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 HIST3H2BBQ8N257 126 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 MMGT1Q8N4V1 131 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 PQLC3Q8N755 202 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 ANKRD20A12PQ8NF67 263 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 CCDC148Q8NFR7 591 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR13C4Q8NGS5 318 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR13C2Q8NGS9 318 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 OR13C9Q8NGT0 318 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 MCFD2Q8NI22 146 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 DNAJB3Q8WWF6 145 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 CCDC47Q96A33 483 aaKnown RBP-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 CXorf40BQ96DE9 158 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 C19orf60Q96EN9 201 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 ATG101Q9BSB4 218 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 COPS4Q9BT78 406 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 ANP32EQ9BTT0 268 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 SNRNP25Q9BV90 132 aaKnown RBP-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 EXTL2Q9UBQ6 330 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 MOSPD1Q9UJG1 213 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 STOML2Q9UJZ1 356 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 ERG28Q9UKR5 140 aa-2.72□□□□□ -2.84
RNU4-88P-201ENST00000411220 MYH3P11055 1940 aa-2.72□□□□□ -2.85
RNU4-88P-201ENST00000411220 RAPGEF6Q8TEU7 1601 aa-2.72□□□□□ -2.85
RNU4-88P-201ENST00000411220 UHRF1BP1LA0JNW5 1464 aa-2.72□□□□□ -2.85
RNU4-88P-201ENST00000411220 TOPAZ1Q8N9V7 1692 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 TMEM94Q12767 1356 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 IBTKQ9P2D0 1353 aaPredicted RBP-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 ARHGEF28Q8N1W1 1705 aaKnown RBP-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 EDC4Q6P2E9 1401 aaKnown RBP-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 A0A0G2JND7 137 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 GOLGA6L7A0A1B0GV03 622 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 A0A1B0GX51 115 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 TRDV1A0A1B0GX56 115 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 hDV103S1A0JD37 113 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 ARL5CA6NH57 179 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 ANXA2P2A6NMY6 339 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 H3BP45 60 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 I3L521 148 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 COPEO14579 308 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 ATP5LO75964 103 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 OTCP00480 354 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 SERPINA1P01009 418 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 CBLN1P23435 193 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 SNCAP37840 140 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 SNU13P55769 128 aaKnown RBP-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 CCL18P55774 89 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 TAS2R39P59534 338 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 VAMP2P63027 116 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 DYNLT1P63172 113 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 PRAMEP78395 509 aa-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 MRPS15P82914 257 aaKnown RBP-2.73□□□□□ -2.85
RNU4-88P-201ENST00000411220 SPAG1Q07617 926 aa-2.73□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms